SRR3126370.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3126370.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1478757
Sequences flagged as poor quality	0
Sequence length	100
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12123	0.8198101513636114	No Hit
GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	3782	0.25575534046499865	No Hit
CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	3525	0.2383758792012481	No Hit
ATCCGTACACCCACACACCTGTCTCTTATACACATCTGACGCGGTATTCA	3496	0.23641477267732294	No Hit
CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	3431	0.2320191890892148	No Hit
GGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT	2476	0.1674379225254724	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT	1643	0.1111068282347945	No Hit
ATCCGTACACCCACACACCGAATCAAAAAAAAAAAAAAAAAAAAAAAAAA	1591	0.107590361364308	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	4610	84.68834	1
CGTAGGG	345	83.086624	2
TAGGGCA	855	80.245705	4
ATAGGGC	825	79.74604	3
GTAGGGC	790	79.11514	3
AGTACGG	230	73.62428	1
CGAAGGG	1450	72.59394	2
AGTAGGG	2245	71.795654	2
GTAGGGT	585	71.493935	3
TAGGGCG	225	71.011955	4
TAGGGAC	695	70.32076	4
AAGGGAC	1090	70.27425	4
ATAGGGA	965	70.12457	3
ACGGGAT	350	69.818474	4
AATAGGG	1850	69.59839	2
GCGTAGG	210	69.43666	1
AGGGATG	1410	68.99002	5
GGTAAGG	805	68.94973	1
GTAGGGA	1065	68.83511	3
GAATAGG	745	68.82031	1