SRR3554357_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3554357_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	612854
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8846	1.4434106655092405	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1112	0.1814461519383083	No Hit
GCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTCTGC	893	0.14571170295045802	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG	829	0.1352687589540086	No Hit
GAATCTGTCTCTTATACACATCTGACGCGAGCTCCATCGTATGCCGTCTTC	621	0.10132919096554807	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCACGA	20	7.0307055E-4	45.000004	44
CTATCGG	25	3.888667E-5	45.0	2
TACCGGT	35	1.210683E-7	45.0	40
CGTTATT	525	0.0	42.85714	1
CGTTTTT	3925	0.0	42.13376	1
CGGTCTA	60	3.6379788E-12	41.249996	31
CGTATGG	45	1.925764E-8	40.0	2
GTTAGCG	45	1.925764E-8	40.0	1
ACCGGTA	40	3.4546974E-7	39.375004	41
CACGACG	70	0.0	38.571426	26
CCACCCG	195	0.0	38.076923	45
TCACGAC	65	9.094947E-12	38.07692	25
CTCACGA	65	9.094947E-12	38.07692	24
ACGGTCT	65	9.094947E-12	38.07692	30
CTAGCGG	65	9.094947E-12	38.07692	2
CGTTCAT	30	1.1393002E-4	37.499996	17
CGTAACT	30	1.1393002E-4	37.499996	33
TATAGCG	30	1.1393002E-4	37.499996	1
ATAACGC	30	1.1393002E-4	37.499996	11
CGACTCT	60	1.546141E-10	37.499996	36