##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3554331_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 904672 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.844069452796152 33.0 31.0 34.0 30.0 34.0 2 31.943477857168123 33.0 31.0 34.0 30.0 34.0 3 31.96309049025503 33.0 31.0 34.0 30.0 34.0 4 35.61690093205051 37.0 35.0 37.0 33.0 37.0 5 35.41610661101482 37.0 35.0 37.0 33.0 37.0 6 35.56312895723533 37.0 35.0 37.0 33.0 37.0 7 35.90264537865657 37.0 35.0 37.0 35.0 37.0 8 35.79755646245269 37.0 35.0 37.0 35.0 37.0 9 37.567039766898944 39.0 37.0 39.0 35.0 39.0 10 37.14658793463266 39.0 37.0 39.0 34.0 39.0 11 37.21762473028899 39.0 37.0 39.0 34.0 39.0 12 37.186844513812744 39.0 37.0 39.0 34.0 39.0 13 37.18740383254926 39.0 37.0 39.0 34.0 39.0 14 38.28396479608079 40.0 38.0 41.0 33.0 41.0 15 38.42441017296877 40.0 38.0 41.0 34.0 41.0 16 38.34529641682289 40.0 38.0 41.0 34.0 41.0 17 38.335769206961196 40.0 38.0 41.0 34.0 41.0 18 38.268856557956916 40.0 37.0 41.0 34.0 41.0 19 38.124528005730255 40.0 37.0 41.0 34.0 41.0 20 38.133353303738815 40.0 37.0 41.0 34.0 41.0 21 38.021413285699126 40.0 36.0 41.0 34.0 41.0 22 38.088985842382655 40.0 36.0 41.0 34.0 41.0 23 38.0840735647837 40.0 36.0 41.0 34.0 41.0 24 38.00700695942839 40.0 36.0 41.0 34.0 41.0 25 37.77130716989141 40.0 36.0 41.0 33.0 41.0 26 37.845733039156734 40.0 36.0 41.0 33.0 41.0 27 37.84358308867744 40.0 36.0 41.0 33.0 41.0 28 37.705855823989246 40.0 36.0 41.0 33.0 41.0 29 37.65220322945775 40.0 36.0 41.0 33.0 41.0 30 37.44153240069329 40.0 35.0 41.0 33.0 41.0 31 37.36501848183651 40.0 35.0 41.0 33.0 41.0 32 37.246546814757174 40.0 35.0 41.0 32.0 41.0 33 37.154367549786 40.0 35.0 41.0 32.0 41.0 34 36.98372780411022 40.0 35.0 41.0 31.0 41.0 35 36.852083407024864 40.0 35.0 41.0 31.0 41.0 36 36.68978370061193 40.0 35.0 41.0 31.0 41.0 37 36.68485373704503 40.0 35.0 41.0 31.0 41.0 38 36.53656684411588 39.0 35.0 41.0 30.0 41.0 39 36.48989357468784 39.0 35.0 41.0 30.0 41.0 40 36.39022872378055 39.0 35.0 41.0 30.0 41.0 41 36.25903974036999 39.0 35.0 41.0 30.0 41.0 42 36.30604683244314 39.0 35.0 41.0 30.0 41.0 43 36.21173088146864 39.0 35.0 41.0 30.0 41.0 44 36.14074161685119 39.0 35.0 41.0 30.0 41.0 45 36.08305330550741 39.0 35.0 41.0 30.0 41.0 46 35.933800316578825 39.0 35.0 41.0 29.0 41.0 47 35.90155990237346 39.0 35.0 41.0 29.0 41.0 48 35.80623474585264 38.0 35.0 41.0 29.0 41.0 49 35.800106557956916 38.0 35.0 41.0 29.0 41.0 50 35.70100102578614 38.0 35.0 41.0 29.0 41.0 51 34.89760598316296 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 10.0 10 18.0 11 12.0 12 30.0 13 28.0 14 47.0 15 73.0 16 101.0 17 166.0 18 256.0 19 542.0 20 897.0 21 1469.0 22 2164.0 23 3346.0 24 5023.0 25 7727.0 26 10531.0 27 12006.0 28 12326.0 29 12594.0 30 14120.0 31 17008.0 32 21582.0 33 29422.0 34 51075.0 35 64607.0 36 69065.0 37 98037.0 38 168314.0 39 301818.0 40 250.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.20099218280216 18.265183403487672 22.430671005624138 15.103153408086026 2 37.458880124509214 22.437524318205934 22.414532559867002 17.68906299741785 3 32.64674931909023 22.934389480386262 27.497037600367868 16.921823600155637 4 27.939076261893813 25.095283152346926 27.67643963779138 19.28920094796788 5 24.816397545187648 28.806241378090625 26.773349899189984 19.604011177531746 6 24.776493579993634 33.70414912808178 26.70603268366878 14.81332460825581 7 77.33366347140179 5.738764988857841 12.259581373138552 4.667990166601818 8 76.53127321283294 5.585228679565633 11.968536663011568 5.914961444589863 9 69.7394193696721 7.70234958084256 14.973272080930988 7.584958968554349 10 34.53030490608751 26.28599094478441 22.24176276042588 16.941941388702205 11 27.946040111775318 25.78978900640232 27.689040889957905 18.575129991864454 12 24.51949435817622 22.895480350889606 32.150215768809026 20.434809522125146 13 24.471631707403347 23.134240918255454 33.79467917654133 18.599448197799866 14 21.468996498178345 25.46779385235754 33.09840472569064 19.964804923773478 15 20.80079852145308 23.926793357150437 35.17186339358353 20.100544727812952 16 24.09370467970712 24.248235824696685 31.607919776449368 20.050139719146827 17 23.70361854904319 23.576169042481695 30.359511513565135 22.36070089490998 18 26.08260231332461 21.805472038484666 30.97144600473984 21.140479643450885 19 23.810618655158997 25.32298998974214 29.22915708676736 21.637234268331508 20 24.791858264652824 24.957664214212443 29.150786141275514 21.09969137985922 21 23.966918396943864 26.242218174100667 29.701261893813445 20.08960153514202 22 22.51556365179866 23.51283116974992 30.144516465636162 23.827088712815254 23 21.48612977963284 25.936250928513317 29.999491528421352 22.578127763432494 24 21.263397120724417 25.09495154044781 30.569974532206146 23.07167680662163 25 22.414974709065827 25.535442679777866 29.361359697216226 22.688222913940077 26 20.898071345194722 24.932903859078205 29.719832160164128 24.449192635562945 27 22.874588801245093 23.55781985073043 30.447057054932618 23.12053429309186 28 21.056360758374307 25.328959003926283 30.870525450107884 22.744154787591526 29 21.982663329914047 24.461241201230944 29.60874217395918 23.94735329489583 30 23.138330798344594 24.090830709914755 30.823436560432953 21.9474019313077 31 22.991205652435358 24.68596353153408 29.12005677195713 23.202774044073433 32 22.037268755969013 24.2243597679601 30.213270666053553 23.52510081001733 33 21.200501397191466 24.317542711612607 30.260691167627606 24.22126472356832 34 20.08960153514202 24.904385235753953 31.441229528492094 23.564783700611937 35 19.99376569629656 24.580400410314457 31.179587740087015 24.24624615330197 36 20.968373067808002 26.875596901418415 29.54883095751831 22.60719907325528 37 20.54192016554066 25.593806374022847 30.540129461285414 23.324143999151072 38 20.479466591206535 26.538789749212977 29.44205192600191 23.53969173357858 39 22.156206890453113 24.230881468642778 28.88582823387924 24.727083407024868 40 22.701597927204556 23.29617806232535 29.780296063103535 24.22192794736656 41 20.125084008347777 24.093925754306532 29.282657139825265 26.498333097520426 42 21.531560609812175 23.983277917300413 30.07532011601995 24.409841356867464 43 21.500168016695554 23.83637384599059 30.995764210675254 23.667693926638606 44 21.89434402744862 23.926793357150437 30.04646988079658 24.132392734604366 45 21.50834777687383 22.94334300166248 29.632065544197232 25.916243677266458 46 21.969509391248984 24.19970995012557 28.90428796293021 24.926492695695234 47 20.218488026599697 24.718793109546887 31.070708499876197 23.99201036397722 48 21.10433394644689 24.106748081072478 30.492266810512543 24.296651161968093 49 22.453883838562486 22.9212355417212 30.61728449648049 24.007596123235825 50 20.84921385872449 22.822304658483958 31.256632237982384 25.07184924480917 51 21.32772982915355 22.474554313607584 29.446362880690458 26.75135297654841 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 281.0 1 778.5 2 1276.0 3 7223.5 4 13171.0 5 8616.0 6 4061.0 7 3943.5 8 3826.0 9 3754.5 10 3683.0 11 3678.0 12 3673.0 13 3676.0 14 3679.0 15 3693.0 16 3707.0 17 3504.5 18 3302.0 19 3278.5 20 3255.0 21 3395.5 22 3536.0 23 3901.0 24 4266.0 25 4731.5 26 5801.5 27 6406.0 28 7535.5 29 8665.0 30 10032.0 31 11399.0 32 13703.0 33 16007.0 34 17540.5 35 19074.0 36 21247.0 37 23420.0 38 25553.5 39 27687.0 40 32038.0 41 36389.0 42 41886.0 43 47383.0 44 59747.5 45 72112.0 46 78579.5 47 85047.0 48 85782.5 49 86518.0 50 79201.0 51 71884.0 52 67849.5 53 63815.0 54 58006.0 55 52197.0 56 49575.5 57 46954.0 58 43458.0 59 39962.0 60 36721.0 61 33480.0 62 30600.0 63 27720.0 64 24982.0 65 22244.0 66 18789.5 67 15335.0 68 13368.5 69 11402.0 70 9663.0 71 7924.0 72 6834.0 73 5744.0 74 4973.5 75 3267.0 76 2331.0 77 1812.0 78 1293.0 79 968.5 80 644.0 81 469.5 82 295.0 83 230.5 84 166.0 85 102.0 86 38.0 87 24.5 88 11.0 89 9.0 90 7.0 91 4.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 904672.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.69773663460147 #Duplication Level Percentage of deduplicated Percentage of total 1 73.8058561224884 25.608961578293908 2 8.65211996110318 6.004179594826729 3 3.3668187175126914 3.5046296747010612 4 1.9761183499666668 2.7426733626378645 5 1.428510496321555 2.478304049056457 6 1.1236917674337539 2.339373660293174 7 0.9665976810143424 2.347712623721652 8 0.8329514698887817 2.31212245852841 9 0.7263270374766878 2.268171383126078 >10 7.01087607905215 44.013790543924166 >50 0.07299471982060408 1.713161420272095 >100 0.0320151706217386 2.0196435820254837 >500 0.002881365355939756 0.7453830061793139 >1k 0.0019209102372931709 0.9976579401634007 >5k 3.2015170621552846E-4 0.9042351222503152 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8140 0.8997736196102012 No Hit GCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 2332 0.25777298291535494 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 1522 0.1682377701531605 No Hit CCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC 1493 0.1650321884616745 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTC 1403 0.15508383148809735 No Hit CTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT 1208 0.13352905804534684 No Hit CGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTG 1023 0.11307965759966042 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCG 945 0.10445774822256022 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1053729970641293E-4 0.0 0.0 0.138392699232429 0.0 2 1.1053729970641293E-4 0.0 0.0 0.6949480032542181 0.0 3 1.1053729970641293E-4 0.0 0.0 1.0621529128789218 0.0 4 1.1053729970641293E-4 0.0 0.0 1.4992173959180786 0.0 5 1.1053729970641293E-4 0.0 0.0 2.6287980616179123 0.0 6 1.1053729970641293E-4 0.0 0.0 3.696256764882742 0.0 7 1.1053729970641293E-4 0.0 0.0 4.605426054967988 0.0 8 2.2107459941282586E-4 0.0 0.0 6.159248876941035 0.0 9 2.2107459941282586E-4 0.0 0.0 6.998226981712709 0.0 10 2.2107459941282586E-4 0.0 0.0 8.346450426231828 0.0 11 2.2107459941282586E-4 0.0 0.0 9.555728485019985 0.0 12 2.2107459941282586E-4 0.0 0.0 10.634572530154575 0.0 13 2.2107459941282586E-4 0.0 0.0 11.1089986204945 0.0 14 2.2107459941282586E-4 0.0 0.0 11.327862473913198 0.0 15 2.2107459941282586E-4 0.0 0.0 11.654610731845354 0.0 16 2.2107459941282586E-4 0.0 0.0 12.219787945244244 0.0 17 2.2107459941282586E-4 0.0 0.0 12.914625411198754 0.0 18 3.316118991192388E-4 0.0 0.0 13.701540447808709 0.0 19 3.316118991192388E-4 0.0 0.0 14.117934455802766 0.0 20 3.316118991192388E-4 0.0 0.0 14.541071239078915 0.0 21 3.316118991192388E-4 0.0 0.0 15.007096494641152 0.0 22 3.316118991192388E-4 0.0 0.0 15.491139330055534 0.0 23 3.316118991192388E-4 0.0 0.0 15.95473276502423 0.0 24 3.316118991192388E-4 0.0 0.0 16.33807612040607 0.0 25 3.316118991192388E-4 0.0 0.0 16.693121927063068 0.0 26 3.316118991192388E-4 0.0 0.0 17.04374624173181 0.0 27 3.316118991192388E-4 0.0 0.0 17.45914541402851 0.0 28 3.316118991192388E-4 0.0 0.0 17.819828622970537 0.0 29 3.316118991192388E-4 0.0 0.0 18.216989140815677 0.0 30 3.316118991192388E-4 0.0 0.0 18.722807824272223 0.0 31 3.316118991192388E-4 0.0 0.0 19.122842311909732 0.0 32 3.316118991192388E-4 0.0 0.0 19.5687497789254 0.0 33 4.421491988256517E-4 0.0 0.0 19.984812175020338 0.0 34 4.421491988256517E-4 0.0 0.0 20.404301227406176 0.0 35 4.421491988256517E-4 0.0 0.0 20.837828516854728 0.0 36 4.421491988256517E-4 0.0 0.0 21.21951381274097 0.0 37 5.526864985320646E-4 0.0 0.0 21.59644600473984 0.0 38 5.526864985320646E-4 0.0 0.0 22.037821442467546 0.0 39 5.526864985320646E-4 0.0 0.0 22.611620565243534 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGAA 45 3.8380676E-10 45.0 11 GTATACG 25 3.8901453E-5 45.0 1 TGTCGTG 20 7.03249E-4 45.0 40 GCGTAAG 65 0.0 41.53846 1 CGTTTTT 4310 0.0 41.397915 1 GCTACGA 50 1.0804797E-9 40.5 10 GCGTACG 40 3.457135E-7 39.375 1 GCCGATA 35 6.2468134E-6 38.57143 9 TGATTCG 70 0.0 38.57143 15 GCTTACG 35 6.2468134E-6 38.57143 1 ATAACGG 35 6.2468134E-6 38.57143 2 CTAACGG 65 9.094947E-12 38.07692 2 CGTCATA 30 1.13972994E-4 37.499996 38 TCTACGG 55 2.748493E-9 36.81818 2 TACGAGG 130 0.0 36.346153 2 TCGGCGT 280 0.0 36.160717 4 GTCGGCG 280 0.0 36.160717 3 TAGGGCG 375 0.0 36.0 5 CATACGA 50 4.8770744E-8 36.0 18 TTACGTA 25 0.0021068722 36.0 12 >>END_MODULE