SRR3554278_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3554278_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	367469
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	8340	2.269579202599403	No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1546	0.4207157610573953	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1337	0.3638402150929738	No Hit
CTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGCT	1010	0.2748531168615584	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	803	0.21852183449488255	No Hit
GAACTTGGGATGAAACTCAGGAGTTACCTCCCATGCGAGAAATCTTAGATT	708	0.1926693136019637	No Hit
AATGATACCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGT	444	0.12082651869953656	No Hit
AATCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCT	437	0.11892159610742675	No Hit
AATGATACGGCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCC	373	0.1015051609795656	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATACCG	45	3.8380676E-10	45.000004	1
TCCGGAT	25	3.885609E-5	45.0	43
CTTCGAA	20	7.027015E-4	45.0	12
CTAGACG	40	6.7939254E-9	45.0	14
CGAACCG	35	1.2089185E-7	45.0	1
CACGGGT	110	0.0	45.0	4
CAACGAA	25	3.885609E-5	45.0	38
ACGTTAC	25	3.885609E-5	45.0	22
TTAGCGA	20	7.027015E-4	45.0	44
CTATCAT	20	7.027015E-4	45.0	15
AACCACG	25	3.885609E-5	45.0	1
GGTCCGT	25	3.885609E-5	45.0	21
ACCGAAA	20	7.027015E-4	45.0	44
ACTTACC	20	7.027015E-4	45.0	11
TATGCAC	20	7.027015E-4	45.0	32
CGTTCAT	20	7.027015E-4	45.0	39
TAGCCGT	25	3.885609E-5	45.0	44
GCACCGA	25	3.885609E-5	45.0	9
CGTTATT	20	7.027015E-4	45.0	19
ATGTACG	20	7.027015E-4	45.0	1