##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3554155_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 768793 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.34765144843931 34.0 31.0 34.0 30.0 34.0 2 32.53049650556132 34.0 31.0 34.0 31.0 34.0 3 32.59304260054397 34.0 31.0 34.0 31.0 34.0 4 36.10890447753817 37.0 35.0 37.0 35.0 37.0 5 35.960665614801385 37.0 35.0 37.0 35.0 37.0 6 35.939395910212504 37.0 35.0 37.0 35.0 37.0 7 36.00450316274992 37.0 35.0 37.0 35.0 37.0 8 36.12283800710985 37.0 36.0 37.0 35.0 37.0 9 37.79229259371508 39.0 38.0 39.0 35.0 39.0 10 37.3288999769769 39.0 37.0 39.0 34.0 39.0 11 37.307515807245906 39.0 37.0 39.0 34.0 39.0 12 37.33561179667349 39.0 37.0 39.0 34.0 39.0 13 37.331543081167496 39.0 37.0 39.0 34.0 39.0 14 38.60812078153677 40.0 38.0 41.0 34.0 41.0 15 38.60449431771621 40.0 38.0 41.0 34.0 41.0 16 38.6052474463217 40.0 38.0 41.0 34.0 41.0 17 38.54655674544383 40.0 38.0 41.0 34.0 41.0 18 38.47232349930346 40.0 38.0 41.0 34.0 41.0 19 38.43843271205643 40.0 38.0 41.0 34.0 41.0 20 38.37393680743711 40.0 38.0 41.0 34.0 41.0 21 38.328312042383324 40.0 38.0 41.0 34.0 41.0 22 38.28720084600146 40.0 38.0 41.0 34.0 41.0 23 38.17459446170816 40.0 37.0 41.0 34.0 41.0 24 38.14979454807731 40.0 37.0 41.0 34.0 41.0 25 38.111563190611776 40.0 37.0 41.0 33.0 41.0 26 38.047319629601205 40.0 37.0 41.0 33.0 41.0 27 37.98278210129384 40.0 37.0 41.0 33.0 41.0 28 37.86968013496481 40.0 37.0 41.0 33.0 41.0 29 37.79208967823588 40.0 37.0 41.0 33.0 41.0 30 37.749758387498325 40.0 37.0 41.0 33.0 41.0 31 37.67036250330063 40.0 36.0 41.0 33.0 41.0 32 37.598348320028926 40.0 36.0 41.0 33.0 41.0 33 37.519036983947565 40.0 36.0 41.0 33.0 41.0 34 37.42599243229322 40.0 36.0 41.0 33.0 41.0 35 37.36840475914843 40.0 36.0 41.0 32.0 41.0 36 37.31362278272565 40.0 36.0 41.0 32.0 41.0 37 37.25839985535768 39.0 35.0 41.0 32.0 41.0 38 37.18904048293884 39.0 35.0 41.0 32.0 41.0 39 37.12387859931087 39.0 35.0 41.0 32.0 41.0 40 37.02514981275844 39.0 35.0 41.0 31.0 41.0 41 36.93744479983559 39.0 35.0 41.0 31.0 41.0 42 36.862860353827365 39.0 35.0 41.0 31.0 41.0 43 36.79886263272429 39.0 35.0 41.0 31.0 41.0 44 36.730567265830985 39.0 35.0 41.0 31.0 41.0 45 36.57620842021194 39.0 35.0 41.0 31.0 41.0 46 36.41378758651548 39.0 35.0 40.0 30.0 41.0 47 36.30703843557369 39.0 35.0 40.0 30.0 41.0 48 36.240527684305135 38.0 35.0 40.0 30.0 41.0 49 36.09847514220343 38.0 35.0 40.0 30.0 41.0 50 36.00676124782614 38.0 35.0 40.0 30.0 41.0 51 35.06003046333669 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 2.0 11 2.0 12 8.0 13 10.0 14 20.0 15 36.0 16 57.0 17 93.0 18 170.0 19 314.0 20 529.0 21 859.0 22 1280.0 23 1823.0 24 2433.0 25 3118.0 26 4061.0 27 5155.0 28 6469.0 29 8350.0 30 10841.0 31 14209.0 32 18869.0 33 25347.0 34 38699.0 35 55554.0 36 66731.0 37 95707.0 38 159451.0 39 248469.0 40 124.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.163434110352203 32.14116153502958 19.75252115979204 26.942883194826177 2 24.972782010242028 30.248064173321037 19.039585428067113 25.739568388369822 3 20.44243378906936 32.03307002014847 20.623626906072246 26.900869284709927 4 20.89548161858914 32.575999001031484 19.02163521259949 27.506884167779884 5 18.97871078430735 34.23210148895737 17.289569493999036 29.499618232736253 6 19.670574523961587 39.05797789522017 19.128816209304716 22.142631371513527 7 86.6635102036569 6.264885346250551 3.8764660968557205 3.195138353236827 8 87.25872894264126 6.114129551127546 3.4256295257631115 3.2015119804680845 9 79.52231615012103 10.442342737251769 6.294542223979667 3.740798888647529 10 29.172351985514954 43.85003505494977 13.940163346960755 13.037449612574518 11 22.319922267762585 30.62189692153805 30.213724630687324 16.844456180012042 12 25.946646236373123 27.380192067305504 29.606278933340963 17.066882762980413 13 24.055630059066615 28.941340516888157 26.571651927111716 20.431377496933507 14 19.519298432738072 31.226480990331595 27.519631422242398 21.73458915468793 15 18.730269396313442 33.67902673411439 28.290970391249658 19.299733478322516 16 20.36035707921378 31.031630100690304 29.000394124296136 19.60761869579978 17 18.837450393018667 31.87568044974395 29.129427557222815 20.157441600014568 18 20.260070005840326 31.228952396809024 28.446929147377777 20.06404844997288 19 20.555858338980716 33.25849741087653 26.34441260521363 19.84123164492913 20 22.767376914201872 31.15012753758164 27.853791592795456 18.22870395542103 21 21.653162814957994 32.449306900557104 26.375890519294533 19.521639765190372 22 20.483146958934327 31.427315285128763 26.808906948944646 21.28063080699226 23 19.610090102277205 34.61282816050614 26.43546442280302 19.341617314413632 24 18.4041738153183 32.7249337598027 29.129297483197686 19.741594941681313 25 19.177984190802984 34.492249539212764 25.336599058524207 20.993167211460044 26 21.15614996494505 32.11904895075788 26.323730835218324 20.40107024907875 27 18.91939702884912 33.44255215643223 26.4804700354972 21.157580779221455 28 19.6002044763675 33.69905813398405 27.40698731648181 19.29375007316664 29 19.773072855762212 33.25173356156989 25.774948523204554 21.20024505946334 30 20.39534699197313 32.47454126143188 26.939761418223114 20.190350328371874 31 20.023335280107908 33.38284817889861 25.133033209199358 21.460783331794122 32 20.312099615891405 32.49002007042208 26.687027587399992 20.51085272628653 33 19.229233356703297 33.19320025026242 26.277164334222608 21.30040205881167 34 17.687205788814413 32.949961823273625 28.359389328466833 21.003443059445132 35 19.261751862985225 32.19761366193501 27.63084471372658 20.90978976135319 36 19.663810674654947 35.27061250557693 25.009853107403423 20.055723712364706 37 18.702953851036625 34.41888778904074 26.18077948160298 20.697378878319654 38 18.820800917802323 31.84316194346202 29.461896765449218 19.874140373286437 39 18.5356786547224 32.953213673901814 27.077509810833345 21.433597860542434 40 21.32927849239002 31.86319334333169 28.16661962322758 18.640908541050713 41 17.860074168209128 31.885175853578275 29.79644715807766 20.45830282013494 42 19.273848747322102 33.61047772287208 26.540694309131325 20.574979220674486 43 19.234696465758663 33.304543615771735 27.175845773829888 20.284914144639714 44 20.093575253676867 32.2910068119767 26.503493137944805 21.11192479640163 45 19.87739222391463 33.01252742936005 26.959792818092776 20.150287528632546 46 18.094987857589754 33.36125589072741 27.973719843963202 20.570036407719634 47 18.125165031419378 34.15756907255919 28.392948426949776 19.324317469071648 48 19.102931478304303 32.54296019864905 28.45837566158901 19.895732661457636 49 17.89207237839054 34.41602616048793 27.34299089611898 20.34891056500254 50 17.87360186682241 32.95620537647975 28.910643046958022 20.25954970973981 51 17.656118096808893 31.51407465988894 28.50741356906215 22.32239367424001 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 9300.0 1 7092.5 2 4885.0 3 3155.5 4 1426.0 5 1480.0 6 1534.0 7 1660.5 8 1787.0 9 2267.5 10 2748.0 11 3346.0 12 3944.0 13 4475.0 14 5006.0 15 5173.0 16 5340.0 17 5358.0 18 5376.0 19 5445.5 20 5515.0 21 5273.0 22 5031.0 23 5980.0 24 6929.0 25 7256.5 26 10065.5 27 12547.0 28 14856.0 29 17165.0 30 19214.0 31 21263.0 32 27379.0 33 33495.0 34 36825.5 35 40156.0 36 41713.5 37 43271.0 38 43244.5 39 43218.0 40 42603.5 41 41989.0 42 41824.0 43 41659.0 44 42597.0 45 43535.0 46 45569.5 47 47604.0 48 49796.5 49 51989.0 50 53411.5 51 54834.0 52 51701.0 53 48568.0 54 43373.0 55 38178.0 56 33150.5 57 28123.0 58 25919.5 59 23716.0 60 23021.0 61 22326.0 62 19890.5 63 17455.0 64 14516.5 65 11578.0 66 9380.5 67 7183.0 68 5626.5 69 4070.0 70 3553.5 71 3037.0 72 2456.5 73 1876.0 74 1783.5 75 1285.5 76 880.0 77 620.0 78 360.0 79 338.5 80 317.0 81 219.5 82 122.0 83 96.5 84 71.0 85 53.5 86 36.0 87 45.5 88 55.0 89 32.0 90 9.0 91 7.0 92 5.0 93 2.5 94 0.0 95 2.0 96 4.0 97 3.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 768793.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.61345318516524 #Duplication Level Percentage of deduplicated Percentage of total 1 72.0850378622051 17.02176666910044 2 9.393890535030451 4.436443887510168 3 3.9283425081956653 2.782851957377188 4 2.3826037025765117 2.2504600395836727 5 1.5877141523766454 1.8745706904285113 6 1.1790112961570212 1.6704316827950885 7 0.852867525092541 1.409740316384432 8 0.7203028660082108 1.360707040450019 9 0.5612209641025253 1.1927128466131454 >10 5.8258774247089775 30.489938587239774 >50 1.004808906993927 16.614396207062175 >100 0.47278611932385717 16.642502580276023 >500 0.002768068614308297 0.4734943431685591 >1k 0.0022144548914466377 0.75272789286708 >5k 5.536137228616594E-4 1.0272552591437156 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 7858 1.022121689453468 No Hit ATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCATA 1681 0.218654436239664 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1624 0.21124021680738506 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1298 0.1688360846157548 No Hit CTGTCTCTTATACACATCTGACGCTGCCCAGATCGTATGCCGTCTTCTGCT 1155 0.1502354990224937 Illumina Single End Adapter 2 (95% over 22bp) AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 918 0.11940795506722875 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 779 0.10132766557447845 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6014805025540035E-4 0.0 0.0 0.17586008197265063 0.0 2 2.6014805025540035E-4 0.0 0.0 0.2649607891851253 0.0 3 2.6014805025540035E-4 0.0 0.0 0.34144431596021296 0.0 4 2.6014805025540035E-4 0.0 0.0 0.7276340965643547 0.0 5 2.6014805025540035E-4 0.0 0.0 0.7993048844097176 0.0 6 2.6014805025540035E-4 0.0 0.0 1.2782374449299096 0.0 7 2.6014805025540035E-4 0.0 0.0 1.6100562830306728 0.0 8 2.6014805025540035E-4 0.0 0.0 1.9743936274133609 0.0 9 2.6014805025540035E-4 0.0 0.0 2.3989552454301744 0.0 10 2.6014805025540035E-4 0.0 0.0 3.111760903129971 0.0 11 2.6014805025540035E-4 0.0 0.0 3.663795065771931 0.0 12 2.6014805025540035E-4 0.0 0.0 3.9312272614344823 0.0 13 2.6014805025540035E-4 0.0 0.0 4.055057733356053 0.0 14 2.6014805025540035E-4 0.0 0.0 4.191635459740138 0.0 15 2.6014805025540035E-4 0.0 0.0 4.310913340782239 0.0 16 2.6014805025540035E-4 0.0 0.0 4.53711207047931 0.0 17 2.6014805025540035E-4 0.0 0.0 4.821844111483846 0.0 18 2.6014805025540035E-4 0.0 0.0 5.161467391092271 0.0 19 2.6014805025540035E-4 0.0 0.0 5.314304370617318 0.0 20 2.6014805025540035E-4 0.0 0.0 5.494456895419183 0.0 21 2.6014805025540035E-4 0.0 0.0 5.687616822733818 0.0 22 2.6014805025540035E-4 0.0 0.0 5.93579806267747 0.0 23 2.6014805025540035E-4 0.0 0.0 6.17331323256065 0.0 24 2.6014805025540035E-4 0.0 0.0 6.3519048690609825 0.0 25 2.6014805025540035E-4 0.0 0.0 6.506302736887562 0.0 26 2.6014805025540035E-4 0.0 0.0 6.655497643709035 0.0 27 2.6014805025540035E-4 0.0 0.0 6.8264149127268325 0.0 28 2.6014805025540035E-4 0.0 0.0 6.985235297407755 0.0 29 2.6014805025540035E-4 0.0 0.0 7.163566785857832 0.0 30 2.6014805025540035E-4 0.0 0.0 7.417341208881974 0.0 31 2.6014805025540035E-4 0.0 0.0 7.594241883055647 0.0 32 2.6014805025540035E-4 0.0 0.0 7.787922106470792 0.0 33 2.6014805025540035E-4 0.0 0.0 7.980171515609533 0.0 34 2.6014805025540035E-4 0.0 0.0 8.167217963743166 0.0 35 2.6014805025540035E-4 0.0 0.0 8.384571659731554 0.0 36 2.6014805025540035E-4 0.0 0.0 8.585275880503595 0.0 37 2.6014805025540035E-4 0.0 0.0 8.785329731149998 0.0 38 2.6014805025540035E-4 0.0 0.0 8.99396846745483 0.0 39 2.6014805025540035E-4 0.0 0.0 9.206379350488364 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCACCG 30 2.1645592E-6 45.000004 1 GCGAACG 30 2.1645592E-6 45.000004 1 CGCATAG 30 2.1645592E-6 45.000004 1 TCTTACG 30 2.1645592E-6 45.000004 1 TGACGGT 30 2.1645592E-6 45.000004 9 TCGGACA 30 2.1645592E-6 45.000004 21 AACTGCG 30 2.1645592E-6 45.000004 1 CGTAACG 30 2.1645592E-6 45.000004 1 CTTCGCG 35 1.2112287E-7 45.0 1 AACCGGT 20 7.031828E-4 45.0 38 CGAACAT 20 7.031828E-4 45.0 11 GCGACAG 25 3.889596E-5 45.0 1 CATGCGT 25 3.889596E-5 45.0 34 ACGCACG 45 3.8380676E-10 45.0 1 TGGACGT 20 7.031828E-4 45.0 40 CGGTTTA 20 7.031828E-4 45.0 21 CCGGATT 25 3.889596E-5 45.0 22 GGATCGA 35 1.2112287E-7 45.0 8 CGATTCT 25 3.889596E-5 45.0 31 TAACGCG 55 1.8189894E-12 45.0 1 >>END_MODULE