##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3553882_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 332262 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27824126743353 33.0 31.0 34.0 30.0 34.0 2 32.427581246125044 34.0 31.0 34.0 31.0 34.0 3 32.46938259566246 34.0 31.0 34.0 31.0 34.0 4 35.97405360829707 37.0 35.0 37.0 35.0 37.0 5 35.88555116143284 37.0 35.0 37.0 35.0 37.0 6 35.86885951447954 37.0 35.0 37.0 35.0 37.0 7 35.927803961933655 37.0 35.0 37.0 35.0 37.0 8 35.81714430178594 37.0 35.0 37.0 35.0 37.0 9 37.66944760460119 39.0 38.0 39.0 35.0 39.0 10 37.248039197982315 39.0 37.0 39.0 34.0 39.0 11 37.14763349404988 39.0 37.0 39.0 34.0 39.0 12 36.9967345046981 39.0 37.0 39.0 33.0 39.0 13 36.89577502091723 39.0 37.0 39.0 33.0 39.0 14 38.09860591942503 40.0 37.0 41.0 33.0 41.0 15 38.210105278364665 40.0 37.0 41.0 33.0 41.0 16 38.26693091596391 40.0 37.0 41.0 34.0 41.0 17 38.199703848168014 40.0 37.0 41.0 34.0 41.0 18 38.15980762169613 40.0 37.0 41.0 34.0 41.0 19 38.06032588740211 40.0 36.0 41.0 34.0 41.0 20 37.99305668418297 40.0 36.0 41.0 34.0 41.0 21 37.88070558775906 40.0 36.0 41.0 33.0 41.0 22 37.836842612155465 40.0 36.0 41.0 33.0 41.0 23 37.74189946488013 40.0 35.0 41.0 33.0 41.0 24 37.68330112983128 40.0 35.0 41.0 33.0 41.0 25 37.57139847469768 40.0 35.0 41.0 33.0 41.0 26 37.51100035514143 40.0 35.0 41.0 33.0 41.0 27 37.461081917282144 40.0 35.0 41.0 33.0 41.0 28 37.38520203935448 39.0 35.0 41.0 33.0 41.0 29 37.287649505510714 39.0 35.0 41.0 33.0 41.0 30 37.18406558679596 39.0 35.0 41.0 32.0 41.0 31 37.06516243205663 39.0 35.0 41.0 32.0 41.0 32 36.92557680384757 39.0 35.0 41.0 31.0 41.0 33 36.80380844032721 39.0 35.0 41.0 31.0 41.0 34 36.73550691923843 39.0 35.0 41.0 31.0 41.0 35 36.550246492226016 39.0 35.0 41.0 31.0 41.0 36 36.40807555483323 39.0 35.0 41.0 30.0 41.0 37 36.32221861061451 39.0 35.0 41.0 30.0 41.0 38 36.16443047956131 38.0 35.0 41.0 30.0 41.0 39 36.120994877536404 38.0 35.0 41.0 30.0 41.0 40 35.98424737105056 38.0 35.0 40.0 29.0 41.0 41 35.81387278713786 38.0 35.0 40.0 29.0 41.0 42 35.67963233833541 38.0 35.0 40.0 28.0 41.0 43 35.57940119544215 38.0 35.0 40.0 28.0 41.0 44 35.41977114445829 38.0 34.0 40.0 28.0 41.0 45 35.31518801427789 37.0 34.0 40.0 27.0 41.0 46 35.169477701332085 37.0 34.0 40.0 27.0 41.0 47 35.043050363869476 37.0 34.0 40.0 26.0 41.0 48 34.879573950677475 37.0 34.0 40.0 26.0 41.0 49 34.8173790562869 37.0 34.0 40.0 26.0 41.0 50 34.747006880112686 36.0 34.0 40.0 26.0 41.0 51 33.3633247256683 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 2.0 12 5.0 13 5.0 14 9.0 15 23.0 16 41.0 17 74.0 18 170.0 19 265.0 20 372.0 21 605.0 22 865.0 23 1280.0 24 1750.0 25 2227.0 26 2889.0 27 3578.0 28 4264.0 29 5113.0 30 6180.0 31 7672.0 32 9901.0 33 13397.0 34 23416.0 35 30826.0 36 27353.0 37 38960.0 38 62241.0 39 88734.0 40 42.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.291739651239084 20.209051892783407 22.936718613624187 13.562489842353322 2 30.23908843021471 26.940486724332004 25.891314685398868 16.929110160054414 3 32.970366758762665 26.283776056244772 25.07117876856216 15.674678416430407 4 27.763030379640163 27.36003515298168 25.888305012309566 18.98862945506859 5 22.563218183240934 33.45131251843424 24.543583076006286 19.441886222318534 6 23.20789015897093 38.591232220356225 24.078889551016967 14.121988069655874 7 81.23348441892242 8.548976410182325 6.895762982224871 3.3217761886703867 8 83.11844267475666 6.551155413498985 6.925257778500099 3.405144133244247 9 78.4275661977596 9.407636142562195 7.674064443120187 4.490733216558017 10 40.194786042340084 27.785602927809983 15.897394225039276 16.12221680481066 11 31.04477791622274 28.203646519915004 20.775773335500297 19.975802228361957 12 27.49637334392738 25.041683972286933 27.765438118111614 19.69650456567408 13 24.004550625711037 27.654080213807177 28.14736563314493 20.19400352733686 14 22.161125858509248 29.467107282806943 27.588770307769174 20.78299655091464 15 20.99246979793055 28.545846350169445 29.32986618993445 21.131817661965556 16 23.01707688510874 24.12915109160843 30.89971167331804 21.954060349964788 17 22.976145331094138 24.580602055004785 27.660099559985795 24.78315305391528 18 24.59565042045133 26.036079960994634 26.492647368642817 22.875622249911213 19 24.766298884615153 28.66111682948998 24.499641848902375 22.07294243699249 20 26.471278689708722 26.756595698575218 24.617320066694358 22.1548055450217 21 25.9665565126316 28.072725740530064 24.223654826612734 21.737062920225604 22 24.056918937465014 25.25597269624573 24.91256899675557 25.774539369533684 23 22.97343662531376 29.291643341700222 24.25977090368444 23.475149129301577 24 23.07365873918775 28.0390174019298 27.455441789912783 21.431882068969667 25 24.319061463543832 28.296946385683587 24.967345046980995 22.416647103791586 26 22.32695884573018 27.644148292612456 25.335729033112425 24.693163828544943 27 22.663139329805997 28.13412307155197 26.527860543787735 22.6748770548543 28 22.028700242579653 27.656186984969693 28.598816596541283 21.71629617590937 29 22.516267283047718 28.44743004014904 25.87325664686302 23.16304602994023 30 23.514575846771525 27.61555639826402 27.505101395886378 21.36476635907808 31 25.739326194388767 28.002901324858094 23.414353732897535 22.84341874785561 32 24.77773564235453 29.06772366385563 24.50897183547923 21.64556885831061 33 24.05541410092036 28.941618361413585 22.55870367360697 24.444263864059085 34 22.46419993860267 28.214180375727587 25.02513077029573 24.296488915374013 35 24.550806291420628 26.80565336993096 24.62544618403549 24.018094154612925 36 25.152439941973505 29.330769091861242 23.70268041485334 21.814110551311916 37 23.316238390186058 29.952868519421422 23.894697557951254 22.836195532441266 38 24.257965099830855 30.003431027321813 24.410254558149894 21.328349314697437 39 23.83299925962042 27.250483052530832 23.87423178094395 25.042285906904795 40 24.419283577417822 26.950418645526725 26.608519782581215 22.02177799447424 41 21.81802312632802 27.035893361263096 26.52304506684484 24.623038445564045 42 22.37722038632164 28.894065526602503 24.824084607929887 23.904629479145974 43 23.30660743630027 26.284077023553703 25.63037602855578 24.778939511590252 44 23.701777512926544 25.816975760092937 26.684965479049666 23.79628124793085 45 24.91106416021092 27.100601332683244 24.883375167789275 23.104959339316565 46 24.759376636509742 26.67142195014777 25.069974899326436 23.499226514016048 47 22.90722381734896 29.03792790027147 26.101088899723713 21.953759382655853 48 22.946349567509976 28.520866063528178 25.865431496830816 22.66735287213103 49 22.823253938157237 29.026792109841026 25.409165056491563 22.74078889551017 50 22.563218183240934 26.780974050598623 27.42474312440183 23.23106464175861 51 22.398890032564665 28.223209394995514 24.759677603818673 24.618222968621147 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4146.0 1 3640.0 2 3134.0 3 2682.5 4 2231.0 5 1662.0 6 1093.0 7 1382.5 8 1672.0 9 1867.0 10 2062.0 11 1767.5 12 1473.0 13 1368.0 14 1263.0 15 1249.5 16 1236.0 17 1175.0 18 1114.0 19 986.5 20 859.0 21 1014.0 22 1169.0 23 1210.5 24 1252.0 25 1709.5 26 2260.0 27 2353.0 28 3079.5 29 3806.0 30 4162.0 31 4518.0 32 5357.5 33 6197.0 34 7170.5 35 8144.0 36 8357.5 37 8571.0 38 9081.5 39 9592.0 40 11243.0 41 12894.0 42 14174.0 43 15454.0 44 17061.0 45 18668.0 46 19654.0 47 20640.0 48 21802.5 49 22965.0 50 23233.5 51 23502.0 52 21885.5 53 20269.0 54 19143.0 55 18017.0 56 17541.5 57 17066.0 58 17147.5 59 17229.0 60 16708.5 61 16188.0 62 14894.5 63 13601.0 64 12617.5 65 11634.0 66 10709.0 67 9784.0 68 8719.5 69 7655.0 70 6671.0 71 5687.0 72 5158.0 73 4629.0 74 3927.5 75 2783.5 76 2341.0 77 1794.5 78 1248.0 79 1028.5 80 809.0 81 621.0 82 433.0 83 286.0 84 139.0 85 115.0 86 91.0 87 55.0 88 19.0 89 15.0 90 11.0 91 7.0 92 3.0 93 4.0 94 5.0 95 3.0 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 332262.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.878487458692234 #Duplication Level Percentage of deduplicated Percentage of total 1 73.47464364495504 19.748872877428052 2 7.35216724332919 3.9523027008806304 3 2.9807293941124438 2.4035249291221987 4 1.906905393754129 2.0501893084373175 5 1.3929479212155822 1.8720166615502225 6 1.1074159920275006 1.7859400111959838 7 0.9248995039582564 1.7401929802384863 8 0.7994894017266284 1.7191252686133232 9 0.6886358292183143 1.6658540549325533 >10 8.99369590289675 53.05662398950226 >50 0.3112857894677909 5.104104592159199 >100 0.060465585004534916 2.9428583467263785 >500 0.004478932222558143 0.8375920207547056 >1k 0.0022394661112790713 1.120802258458686 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2445 0.7358650703360601 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1279 0.3849371881226261 No Hit TATATATATATATATATATATATATATATATATATATATATATATATATAT 966 0.2907344204272532 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 764 0.2299390240232106 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 552 0.16613395452985896 No Hit GGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 501 0.15078462177438287 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 424 0.12761013898670326 No Hit TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 419 0.12610530244204873 No Hit ATATATATATATATATATATATATATATATATATATATATATATATATATA 415 0.12490143320632513 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCC 406 0.122192727425947 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 361 0.10864919852405631 No Hit AGTCTTTTTTTTTTTCTTTTATAGTAAACACACCCCCACCTCCATCCCAGC 341 0.10262985234543824 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.0096730893090394E-4 0.0 0.0 0.06079539640404259 0.0 2 3.0096730893090394E-4 0.0 0.0 0.26304542800561004 0.0 3 3.0096730893090394E-4 0.0 0.0 0.3346756475311652 0.0 4 3.0096730893090394E-4 0.0 0.0 0.43188808831584713 0.0 5 3.0096730893090394E-4 0.0 0.0 0.7888353167078992 0.0 6 3.0096730893090394E-4 0.0 0.0 1.109064533410381 0.0 7 3.0096730893090394E-4 0.0 0.0 1.3528480536444132 0.0 8 3.0096730893090394E-4 0.0 0.0 1.7116010858900506 0.0 9 3.0096730893090394E-4 0.0 0.0 1.8723176288591534 0.0 10 3.0096730893090394E-4 0.0 0.0 2.255449013128194 0.0 11 3.0096730893090394E-4 0.0 0.0 2.8236752923897406 0.0 12 3.0096730893090394E-4 0.0 0.0 3.217942467089225 0.0 13 3.0096730893090394E-4 0.0 0.0 3.374746435042226 0.0 14 3.0096730893090394E-4 0.0 0.0 3.4370466679909226 0.0 15 3.0096730893090394E-4 0.0 0.0 3.537268781864914 0.0 16 3.0096730893090394E-4 0.0 0.0 3.792790027147251 0.0 17 3.0096730893090394E-4 0.0 0.0 4.091349597606708 0.0 18 3.0096730893090394E-4 0.0 0.0 4.431442656698629 0.0 19 3.0096730893090394E-4 0.0 0.0 4.61804238823579 0.0 20 3.0096730893090394E-4 0.0 0.0 4.770632813863758 0.0 21 3.0096730893090394E-4 0.0 0.0 4.961747055034882 0.0 22 3.0096730893090394E-4 0.0 0.0 5.18085125593658 0.0 23 3.0096730893090394E-4 0.0 0.0 5.42704251464206 0.0 24 3.0096730893090394E-4 0.0 0.0 5.638923500129416 0.0 25 6.019346178618079E-4 0.0 0.0 5.833950316316642 0.0 26 6.019346178618079E-4 0.0 0.0 5.993763957358952 0.0 27 6.019346178618079E-4 0.0 0.0 6.176752081188941 0.0 28 6.019346178618079E-4 0.0 0.0 6.359740205018931 0.0 29 6.019346178618079E-4 0.0 0.0 6.537611884597095 0.0 30 6.019346178618079E-4 0.0 0.0 6.740463850816524 0.0 31 6.019346178618079E-4 0.0 0.0 6.918636497703619 0.0 32 6.019346178618079E-4 0.0 0.0 7.109750738874744 0.0 33 6.019346178618079E-4 0.0 0.0 7.308991097387002 0.0 34 6.019346178618079E-4 0.0 0.0 7.492882123143784 0.0 35 6.019346178618079E-4 0.0 0.0 7.7198114740776855 0.0 36 6.019346178618079E-4 0.0 0.0 7.916343126809566 0.0 37 6.019346178618079E-4 0.0 0.0 8.11738928917541 0.0 38 6.019346178618079E-4 0.0 0.0 8.322648993866286 0.0 39 6.019346178618079E-4 0.0 0.0 8.511656463874894 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGTAC 25 3.8847986E-5 45.000004 33 TACGGGT 25 3.8847986E-5 45.000004 4 GTAATCG 25 3.8847986E-5 45.000004 1 CTAACGG 25 3.8847986E-5 45.000004 2 AATTCGT 25 3.8847986E-5 45.000004 31 TCGTACA 25 3.8847986E-5 45.000004 34 ACCACGG 25 3.8847986E-5 45.000004 2 TAGTAGC 25 3.8847986E-5 45.000004 32 TGATAAG 20 7.0260395E-4 45.0 1 AGCGCTA 20 7.0260395E-4 45.0 25 ATGACGC 20 7.0260395E-4 45.0 2 CATCGGA 20 7.0260395E-4 45.0 31 ATGCGAG 20 7.0260395E-4 45.0 1 TCCCCCG 20 7.0260395E-4 45.0 38 ATCATGC 20 7.0260395E-4 45.0 34 CTGGCGT 20 7.0260395E-4 45.0 17 ACGGTGT 20 7.0260395E-4 45.0 22 CGTATGG 30 2.1608266E-6 44.999996 2 ATGTTAC 60 0.0 44.999996 20 AACACGT 115 0.0 43.04348 41 >>END_MODULE