##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3553876_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 380796 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.056589354930196 33.0 31.0 34.0 30.0 34.0 2 32.26095074528094 34.0 31.0 34.0 30.0 34.0 3 32.329509763758026 34.0 31.0 34.0 30.0 34.0 4 35.74664912446559 37.0 35.0 37.0 35.0 37.0 5 35.68470519648316 37.0 35.0 37.0 33.0 37.0 6 35.728484542904866 37.0 35.0 37.0 33.0 37.0 7 35.57897929600101 37.0 35.0 37.0 33.0 37.0 8 35.67948192733117 37.0 35.0 37.0 35.0 37.0 9 37.41028792319247 39.0 37.0 39.0 34.0 39.0 10 37.16026954064643 39.0 37.0 39.0 34.0 39.0 11 37.03104024201935 39.0 37.0 39.0 33.0 39.0 12 37.018230233510856 39.0 37.0 39.0 33.0 39.0 13 36.93380970388345 39.0 37.0 39.0 33.0 39.0 14 38.012423975041756 40.0 37.0 41.0 33.0 41.0 15 38.09239855460667 40.0 37.0 41.0 33.0 41.0 16 38.25208247985798 40.0 37.0 41.0 34.0 41.0 17 38.18004916018025 40.0 37.0 41.0 34.0 41.0 18 38.14187649029927 40.0 37.0 41.0 34.0 41.0 19 38.05739556087774 40.0 37.0 41.0 34.0 41.0 20 38.0159009023204 40.0 36.0 41.0 33.0 41.0 21 37.873152554123465 40.0 36.0 41.0 33.0 41.0 22 37.8790822382588 40.0 36.0 41.0 33.0 41.0 23 37.76197491570289 40.0 36.0 41.0 33.0 41.0 24 37.761355161293714 40.0 36.0 41.0 33.0 41.0 25 37.62764314751205 40.0 35.0 41.0 33.0 41.0 26 37.60937352283112 40.0 35.0 41.0 33.0 41.0 27 37.51231367976554 40.0 35.0 41.0 33.0 41.0 28 37.46871815880419 40.0 35.0 41.0 33.0 41.0 29 37.33806552589838 39.0 35.0 41.0 32.0 41.0 30 37.22942730490867 39.0 35.0 41.0 32.0 41.0 31 37.118722360529 39.0 35.0 41.0 32.0 41.0 32 36.94122312209162 39.0 35.0 41.0 31.0 41.0 33 36.868380970388344 39.0 35.0 41.0 31.0 41.0 34 36.76912047395456 39.0 35.0 41.0 31.0 41.0 35 36.62213363585752 39.0 35.0 41.0 31.0 41.0 36 36.53979296001008 39.0 35.0 41.0 30.0 41.0 37 36.44807455960672 39.0 35.0 41.0 30.0 41.0 38 36.38508545257828 39.0 35.0 41.0 30.0 41.0 39 36.29112700763663 39.0 35.0 41.0 30.0 41.0 40 36.1557526864778 39.0 35.0 41.0 30.0 41.0 41 35.98302503177555 38.0 35.0 40.0 29.0 41.0 42 35.90709461233836 38.0 35.0 40.0 29.0 41.0 43 35.7879179403145 38.0 35.0 40.0 28.0 41.0 44 35.71374174098467 38.0 35.0 40.0 28.0 41.0 45 35.605326736625386 38.0 35.0 40.0 28.0 41.0 46 35.495656466979696 38.0 34.0 40.0 27.0 41.0 47 35.333861175012345 38.0 34.0 40.0 27.0 41.0 48 35.19581088036639 38.0 34.0 40.0 26.0 41.0 49 35.10451790459984 37.0 34.0 40.0 26.0 41.0 50 34.974997111314195 37.0 34.0 40.0 26.0 41.0 51 33.6407446506791 36.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 3.0 11 1.0 12 1.0 13 4.0 14 18.0 15 23.0 16 50.0 17 93.0 18 162.0 19 291.0 20 486.0 21 739.0 22 1082.0 23 1535.0 24 2112.0 25 2719.0 26 3675.0 27 4269.0 28 4894.0 29 5658.0 30 6754.0 31 8474.0 32 10844.0 33 14710.0 34 24782.0 35 32399.0 36 31733.0 37 45119.0 38 74031.0 39 104105.0 40 28.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.75803317261736 27.928864798999992 20.205044170632043 12.108057857750607 2 28.152606645027785 23.70823222933014 32.647401758421836 15.491759367220245 3 38.942110736457316 23.732392146976334 23.252345087658483 14.073152028907868 4 24.87263521675648 25.7607747980546 32.54656036302902 16.820029622159897 5 20.92406432840681 39.39694744692696 22.04014748054076 17.638840744125464 6 21.227638945787245 34.24405718547464 31.589354930198848 12.938948938539271 7 73.03359278984023 17.19083183646887 6.4338911123016 3.3416842613893003 8 74.40309246945871 5.962247502599817 16.088141682160526 3.5465183457809433 9 69.92195296169076 18.184014537967837 7.598556707528441 4.29547579281295 10 34.74721373123667 25.95799325623168 24.25681992457904 15.037973087952604 11 27.234267166671916 35.65793758337797 19.75414657716993 17.353648672780174 12 24.5509406611414 22.263626718768055 32.269509133499305 20.915923486591247 13 28.620311137722037 26.207733274509188 26.97612369877835 18.19583188899043 14 20.092648032017145 26.903118730238763 34.214645111818406 18.789588125925693 15 18.309803674408347 34.6881269761237 28.489269845271487 18.512799504196472 16 20.543808233279762 22.57376653116104 36.71309572579544 20.16932950976376 17 20.088971522810116 31.380844336600173 26.48898622884694 22.04119791174277 18 20.653840901690142 24.57851448019412 33.79263437641152 20.97501024170422 19 22.71688778243469 34.226987678442 23.31799703778401 19.7381275013393 20 22.758642422714527 24.829830145274634 32.034737759850415 20.376789672160424 21 22.72161472284373 34.113015893024084 23.80434668431391 19.361022699818275 22 20.81324383659492 23.82299183814956 25.263920839504618 30.0998434857509 23 20.99260496433786 35.247481591193186 23.050137081271863 20.70977636319709 24 20.41407997983172 25.88446307209109 32.3325350056198 21.368921942457376 25 22.26283889536655 33.79263437641152 22.841889095473693 21.10263763274824 26 19.869956617191356 26.284939967856808 30.864820008613535 22.9802834063383 27 21.23814325780733 33.5533986701541 24.09347787266673 21.114980199371843 28 19.95635458355655 25.548587695248898 33.6665826321705 20.828475089024046 29 21.35264025882625 33.698095568230755 23.929347997352913 21.01991617559008 30 21.73210853055179 25.15677685689976 32.03841426905745 21.072700343491 31 29.208815218647256 27.487946301956956 22.031744030924692 21.2714944484711 32 22.19114696582947 26.970083719366798 30.365077364258024 20.4736919505457 33 23.473460855681257 30.90867551129739 22.290937930020274 23.32692570300108 34 21.56482736163195 25.691708946522546 30.501896028319624 22.241567663525878 35 21.525173583756132 31.127427809115645 23.899935923696678 23.44746268343155 36 22.344509921322704 27.01210096744714 29.496633367997564 21.1467557432326 37 20.896227901553587 33.68286431580164 23.466895660668705 21.95401212197607 38 21.563776930429942 26.161251693820315 30.481675227680967 21.793296148068784 39 21.883370623641003 29.95882309688127 24.64836815512768 23.509438124350048 40 21.851069864179244 23.495519910923434 28.05754262124602 26.595867603651296 41 20.837666362041617 31.655532095925377 24.394951627643145 23.111849914389857 42 22.324551728484543 26.781531318606287 28.673095305622958 22.22082164728621 43 21.14124097942205 32.598031491927436 23.764692906438093 22.49603462221242 44 20.96398071408313 24.374468219203983 31.893454763180284 22.7680963035326 45 22.155432304961188 30.32910009558924 23.83008224876312 23.68538535068646 46 22.50391285622748 25.02205905524218 30.014495950587715 22.459532137942624 47 21.549070893601822 31.414195527263942 25.66859946007836 21.368134119055874 48 21.118131492977867 26.328795470540655 30.19464490173216 22.358428134749314 49 24.824577989264593 27.12318406705953 25.96272019664072 22.08951774703516 50 21.471338984653197 23.700091387514576 31.625069591067135 23.203500036765092 51 21.49733715690291 29.47746299856091 24.43014107291043 24.59505877162575 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3810.0 1 3579.0 2 3348.0 3 2926.0 4 2504.0 5 1865.0 6 1226.0 7 1482.5 8 1739.0 9 2395.0 10 3051.0 11 11112.5 12 19174.0 13 11840.0 14 4506.0 15 3345.5 16 2185.0 17 2470.0 18 2755.0 19 2266.5 20 1778.0 21 2157.5 22 2537.0 23 2887.5 24 3238.0 25 2576.5 26 2675.5 27 3436.0 28 4035.5 29 4635.0 30 5307.5 31 5980.0 32 6552.5 33 7125.0 34 7340.0 35 7555.0 36 8685.0 37 9815.0 38 10988.5 39 12162.0 40 12579.5 41 12997.0 42 14488.0 43 15979.0 44 18462.5 45 20946.0 46 22145.5 47 23345.0 48 25216.0 49 27087.0 50 26475.5 51 25864.0 52 24177.0 53 22490.0 54 21263.5 55 20037.0 56 19593.5 57 19150.0 58 17982.5 59 16815.0 60 16581.0 61 16347.0 62 14471.0 63 12595.0 64 11762.5 65 10930.0 66 9018.0 67 7106.0 68 6707.0 69 6308.0 70 5649.5 71 4991.0 72 4913.0 73 4835.0 74 4059.0 75 2778.0 76 2273.0 77 1769.5 78 1266.0 79 1058.5 80 851.0 81 635.0 82 419.0 83 325.0 84 231.0 85 160.5 86 90.0 87 71.0 88 52.0 89 34.5 90 17.0 91 15.0 92 13.0 93 7.5 94 2.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 380796.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.605635817396205 #Duplication Level Percentage of deduplicated Percentage of total 1 73.12602090605182 19.455642810017157 2 8.614572201829143 4.583923414490623 3 3.3606599338618404 2.6823748291932885 4 1.9214691038080842 2.044876288411862 5 1.427591301456494 1.8990987131317079 6 1.0457000355842379 1.669290859259549 7 0.8527553550442877 1.5881668892349903 8 0.7437866154483338 1.5831132653177669 9 0.6598107071828323 1.5799215045352575 >10 7.815757740488731 45.58711892678187 >50 0.32990535358930784 5.464826133328947 >100 0.08697504776445387 4.54746093650954 >500 0.00899741873425385 1.6815258841091019 >1k 0.004998565963474361 2.421748366784779 >5k 0.0 0.0 >10k+ 9.997131926948722E-4 3.2109111788935585 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATGTATATATATGTATATATACATATATATGTATATATACATATATATGTA 12072 3.1702013676614254 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2929 0.7691782476706688 No Hit ATGTATATATACTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGC 2314 0.6076744503618735 No Hit ATGTATATATACATATATATATACATATATATGTATATATACATATATATG 1419 0.3726404689124886 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1381 0.3626613724934085 No Hit ATGTATATATACATATATATGTATATATACATATATATGTATATATACATA 1062 0.2788894841332367 No Hit ATGTATATATATGTATATATACATATATATGCTGTCTCTTATACACATCTG 927 0.24343743106545238 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 870 0.2284687864368323 No Hit ATGTATATATATGTATATATACATATATATGTATATATACATATATATACA 857 0.22505488503030496 No Hit ATGTATATATATGTATATATACATATATATCTGTCTCTTATACACATCTGA 722 0.18960283196252062 No Hit ATGTATATATATGCTGTCTCTTATACACATCTGACGCGATTCCGATCGTAT 645 0.16938203132385843 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGCC 631 0.16570552211682896 No Hit ATGTATATATATGTATATATACATATATATGTATATATACATATATATGCT 627 0.16465509091482053 No Hit ATGTATATATATGTATATATACATATATATGTATATATACCTGTCTCTTAT 538 0.1412829966701331 No Hit ATGTATATATATGTATATATACCTGTCTCTTATACACATCTGACGCGATTC 505 0.13261693925356358 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 487 0.12788999884452568 No Hit GGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 444 0.11659786342293511 No Hit GCTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGCCGTCTTCTGC 416 0.10924484500887614 No Hit ATGTATATATATGTATATATACATATATACTGTCTCTTATACACATCTGAC 400 0.10504312020084244 No Hit CCTGTCTCTTATACACATCTGACGCGATTCCGATCGTATGCCGTCTTCTGC 391 0.10267964999632348 No Hit ATGTATATATATGTATATATACATATATATGTATATATACATATATATCTG 381 0.10005357199130242 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.626078005021061E-4 0.0 0.0 0.06591455792602864 0.0 2 2.626078005021061E-4 0.0 0.0 0.38734650574060653 0.0 3 2.626078005021061E-4 0.0 0.0 0.5105095641760943 0.0 4 2.626078005021061E-4 0.0 0.0 0.7085158457546823 0.0 5 2.626078005021061E-4 0.0 0.0 1.3626718768054287 0.0 6 2.626078005021061E-4 0.0 0.0 1.9078456706478009 0.0 7 2.626078005021061E-4 0.0 0.0 2.3592684797109214 0.0 8 2.626078005021061E-4 0.0 0.0 3.0210401369762288 0.0 9 2.626078005021061E-4 0.0 0.0 3.3548146514144057 0.0 10 2.626078005021061E-4 0.0 0.0 4.055189655353523 0.0 11 2.626078005021061E-4 0.0 0.0 4.8784651099276255 0.0 12 2.626078005021061E-4 0.0 0.0 6.10852004747949 0.0 13 2.626078005021061E-4 0.0 0.0 6.401065137238836 0.0 14 2.626078005021061E-4 0.0 0.0 6.70201367661425 0.0 15 2.626078005021061E-4 0.0 0.0 6.877435687349657 0.0 16 2.626078005021061E-4 0.0 0.0 7.240884883244572 0.0 17 2.626078005021061E-4 0.0 0.0 7.692570300108194 0.0 18 2.626078005021061E-4 0.0 0.0 8.206493765690816 0.0 19 5.252156010042122E-4 0.0 0.0 8.473040683200454 0.0 20 5.252156010042122E-4 0.0 0.0 8.753768421937206 0.0 21 5.252156010042122E-4 0.0 0.0 9.114328932026597 0.0 22 5.252156010042122E-4 0.0 0.0 9.481454637128541 0.0 23 7.878234015063183E-4 0.0 0.0 9.96885471486045 0.0 24 7.878234015063183E-4 0.0 0.0 10.254046786205738 0.0 25 7.878234015063183E-4 0.0 0.0 10.507200705889767 0.0 26 7.878234015063183E-4 0.0 0.0 10.737507746930115 0.0 27 7.878234015063183E-4 0.0 0.0 10.974379982983015 0.0 28 7.878234015063183E-4 0.0 0.0 11.260359877729808 0.0 29 7.878234015063183E-4 0.0 0.0 11.531633735648484 0.0 30 7.878234015063183E-4 0.0 0.0 11.904011596760471 0.0 31 7.878234015063183E-4 0.0 0.0 12.358585699429616 0.0 32 7.878234015063183E-4 0.0 0.0 12.88774041744136 0.0 33 7.878234015063183E-4 0.0 0.0 13.24068530131619 0.0 34 7.878234015063183E-4 0.0 0.0 13.532179959873528 0.0 35 7.878234015063183E-4 0.0 0.0 13.84914757507957 0.0 36 7.878234015063183E-4 0.0 0.0 14.08864588913749 0.0 37 7.878234015063183E-4 0.0 0.0 14.349678042836585 0.0 38 7.878234015063183E-4 0.0 0.0 14.597054590909568 0.0 39 0.0010504312020084244 0.0 0.0 14.910608304709083 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAG 30 2.1616634E-6 45.000004 1 CACGGGT 35 1.209064E-7 45.000004 4 GCAACTC 25 3.8858747E-5 45.000004 11 ATAGCGG 25 3.8858747E-5 45.000004 2 CAATTGG 35 1.209064E-7 45.000004 2 ACCAGTC 25 3.8858747E-5 45.000004 13 TCGTATA 25 3.8858747E-5 45.000004 29 TTAGTAG 30 2.1616634E-6 45.000004 1 CAATGCG 25 3.8858747E-5 45.000004 1 GCGTAAG 25 3.8858747E-5 45.000004 1 GTAGTAG 25 3.8858747E-5 45.000004 1 CCGTACT 20 7.0273376E-4 45.0 44 CCGTAAT 20 7.0273376E-4 45.0 27 CGTAGTG 20 7.0273376E-4 45.0 28 TACGAAC 20 7.0273376E-4 45.0 12 CGTACTC 20 7.0273376E-4 45.0 45 GAACGCC 20 7.0273376E-4 45.0 36 CTCGACG 20 7.0273376E-4 45.0 13 ACCGTAA 20 7.0273376E-4 45.0 26 GCGTGAA 20 7.0273376E-4 45.0 14 >>END_MODULE