SRR3553659_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3553659_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1492351
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14708	0.985559027333382	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2411	0.16155716718117924	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGCCG	20	7.0339645E-4	45.0	1
ACGATAG	20	7.0339645E-4	45.0	1
TTGCGAT	20	7.0339645E-4	45.0	23
TCGTACC	25	3.891367E-5	45.0	36
CGTTCGA	30	2.1659398E-6	44.999996	14
CGTTTTT	11125	0.0	42.89663	1
CGCATCG	60	3.6379788E-12	41.249996	21
CGTATGG	205	0.0	40.609753	2
CGTTAGG	250	0.0	39.6	2
TAGTACG	40	3.459154E-7	39.375	1
ACACGAC	455	0.0	39.065933	26
TAACGCC	70	0.0	38.571426	12
ACTCGCA	35	6.2495437E-6	38.571426	37
TCGACGG	100	0.0	38.25	2
TCGTTTA	65	9.094947E-12	38.07692	38
AACACGT	480	0.0	37.968746	41
ACGACGA	30	1.1400854E-4	37.499996	17
GACACGA	475	0.0	37.42105	25
CACGACC	475	0.0	37.42105	27
CACAACG	345	0.0	37.173912	12