SRR3553567_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3553567_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	405486
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3283	0.8096457090996977	No Hit
CTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGCT	2517	0.6207365975644042	No Hit
AATCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCT	918	0.2263949926754561	No Hit
AAACTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCT	858	0.21159793433065507	No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	797	0.196554258346774	No Hit
AATGATACCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGT	773	0.19063543500885358	No Hit
AATGATACGGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCC	684	0.16868646513073202	No Hit
AAAAACTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTT	647	0.15956161248477135	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	612	0.15092999511697075	No Hit
TGCAAAGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGG	513	0.126514848848049	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGATCG	20	7.0278783E-4	45.000004	11
CTAGACG	20	7.0278783E-4	45.000004	1
TACCACG	20	7.0278783E-4	45.000004	1
CATGCGT	20	7.0278783E-4	45.000004	2
ACCGATT	20	7.0278783E-4	45.000004	42
CGCGACG	20	7.0278783E-4	45.000004	1
TAACGCG	20	7.0278783E-4	45.000004	1
CCGCTAT	20	7.0278783E-4	45.000004	23
ATATCAC	20	7.0278783E-4	45.000004	30
CGCTATA	20	7.0278783E-4	45.000004	24
CGGATCG	20	7.0278783E-4	45.000004	1
CCTCATA	20	7.0278783E-4	45.000004	39
ACGCTAG	20	7.0278783E-4	45.000004	1
CGTACAG	20	7.0278783E-4	45.000004	1
GGTTGAC	20	7.0278783E-4	45.000004	26
CGGTAGA	20	7.0278783E-4	45.000004	25
CCTATAT	20	7.0278783E-4	45.000004	29
TATCGCG	20	7.0278783E-4	45.000004	1
TAATGCG	20	7.0278783E-4	45.000004	1
ATTTACG	25	3.886324E-5	45.0	1