SRR3553546_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3553546_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	984770
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTAACG	45	3.8380676E-10	45.000004	1
CTTACCG	45	3.8380676E-10	45.000004	1
CCTTACG	25	3.890397E-5	45.0	1
CGAACAT	20	7.032795E-4	45.0	14
CCGGATA	25	3.890397E-5	45.0	5
TACGGTT	20	7.032795E-4	45.0	24
CACGAAT	20	7.032795E-4	45.0	15
TCGATAG	20	7.032795E-4	45.0	1
CGTTATG	40	6.8139343E-9	45.0	1
ATCGTAC	25	3.890397E-5	45.0	28
CGTTACG	20	7.032795E-4	45.0	1
AAACGCG	25	3.890397E-5	45.0	1
TACGACC	20	7.032795E-4	45.0	18
TATTCGA	20	7.032795E-4	45.0	43
CTTGACG	20	7.032795E-4	45.0	1
CGTACTA	20	7.032795E-4	45.0	34
TCGTACT	25	3.890397E-5	45.0	29
CGTGTGA	20	7.032795E-4	45.0	39
AATTACG	35	1.2116834E-7	45.0	1
ATACGAG	25	3.890397E-5	45.0	1