SRR3553501_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3553501_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	945228
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT	4735	0.5009373399856966	No Hit
CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	1040	0.11002636400952996	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGCGA	20	7.032651E-4	45.0	21
CGAACCG	35	1.2116288E-7	45.0	1
ATTCGCG	45	3.8380676E-10	45.0	1
ATCCGGT	20	7.032651E-4	45.0	33
TCGGACG	20	7.032651E-4	45.0	1
GTCACGC	20	7.032651E-4	45.0	13
CGTAACG	50	2.1827873E-11	45.0	1
TAGTGCG	20	7.032651E-4	45.0	1
ACTCACG	35	1.2116288E-7	45.0	1
TCGACAG	40	6.8121153E-9	45.0	1
TAAGACG	25	3.8902785E-5	45.0	1
CCGTTGC	20	7.032651E-4	45.0	30
CCGCAGT	20	7.032651E-4	45.0	38
TCGAACG	35	1.2116288E-7	45.0	1
CCGCACG	20	7.032651E-4	45.0	1
CGATTCG	30	2.1650903E-6	44.999996	1
CGTTACG	30	2.1650903E-6	44.999996	1
TAGTACG	30	2.1650903E-6	44.999996	1
TGCGAAG	110	0.0	42.954544	1
ACGACCA	105	0.0	42.857147	28