SRR3553463_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3553463_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	670477
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	20537	3.063043176723437	No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	4779	0.7127761280401863	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3792	0.5655674989596958	No Hit
CTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGCT	2388	0.35616434269930214	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2078	0.3099286030691582	No Hit
TGAGAAGGGAAAAGCCAGCCCTTTGTATAGAAATTTTGCTTTTGTTTTTTT	908	0.13542597285216346	No Hit
AATGATACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGT	818	0.12200269360470233	No Hit
AATGATACGGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCC	717	0.10693879133810705	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCAAG	30	2.1641426E-6	45.000004	1
CGAGTGG	30	2.1641426E-6	45.000004	2
CCGATAT	30	2.1641426E-6	45.000004	33
CGACATA	30	2.1641426E-6	45.000004	14
CCGTCAA	30	2.1641426E-6	45.000004	13
ATCCGAT	30	2.1641426E-6	45.000004	31
ATATCCG	30	2.1641426E-6	45.000004	1
TCATGCG	30	2.1641426E-6	45.000004	1
CGTACTC	30	2.1641426E-6	45.000004	45
CATAACG	30	2.1641426E-6	45.000004	1
CATCGCG	30	2.1641426E-6	45.000004	1
CGCGTAG	30	2.1641426E-6	45.000004	1
CTTACGA	30	2.1641426E-6	45.000004	14
ACGCGAG	20	7.031181E-4	45.0	1
TATTTCG	20	7.031181E-4	45.0	17
CCGGGTA	105	0.0	45.0	5
CGAACCG	20	7.031181E-4	45.0	1
GTATTCG	20	7.031181E-4	45.0	31
ATTAGCG	40	6.8084773E-9	45.0	1
GGTCGTT	20	7.031181E-4	45.0	7