SRR3553257_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3553257_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	831314
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	22137	2.6628927216430855	No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5048	0.6072314432332429	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3880	0.4667309825168348	No Hit
CTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGCT	3310	0.3981648330233823	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2047	0.24623668072473215	No Hit
TGCAAAGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGG	850	0.10224776678848185	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATGACG	35	1.2113924E-7	45.000004	1
CGATTAG	35	1.2113924E-7	45.000004	42
CCGTCGT	35	1.2113924E-7	45.000004	41
CCCCGTC	35	1.2113924E-7	45.000004	11
GTATGCG	35	1.2113924E-7	45.000004	1
TTACGTC	35	1.2113924E-7	45.000004	11
TCGGTCA	35	1.2113924E-7	45.000004	34
GTGTTCG	20	7.03216E-4	45.0	42
CGTGGAC	25	3.8898703E-5	45.0	34
TCGCATA	20	7.03216E-4	45.0	21
ATCTCCG	40	6.8102963E-9	45.0	1
CGAGTAA	45	3.8380676E-10	45.0	30
GCGAATT	20	7.03216E-4	45.0	18
CTATCGG	20	7.03216E-4	45.0	2
GCGAAGT	20	7.03216E-4	45.0	23
TCCGAGT	20	7.03216E-4	45.0	17
GGGTCGA	20	7.03216E-4	45.0	7
ACCGCCG	25	3.8898703E-5	45.0	1
TAGCGTC	25	3.8898703E-5	45.0	32
CGGCATA	25	3.8898703E-5	45.0	35