SRR3553077_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3553077_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	454504
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AATGATACGGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCC	10545	2.320111594177389	No Hit
AATGATACCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGT	10266	2.258725995810818	No Hit
AATCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCT	8965	1.9724798901659832	No Hit
CTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGCT	4653	1.0237533663070073	No Hit
AATGACTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTT	2356	0.5183672750954887	No Hit
AATGATCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCT	1897	0.41737806487951695	No Hit
AACTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTG	1692	0.37227395138436625	No Hit
AATGATACGGCGACTGTCTCTTATACACATCTGACGCACCCGTAATCGTAT	1649	0.3628130885536761	No Hit
AATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACCCGTAATC	1526	0.33575062045658566	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1451	0.3192491155193354	No Hit
TGCAAAGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGG	778	0.17117561121574287	No Hit
AAACTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCT	705	0.15511414641015261	No Hit
AATGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTC	679	0.1493936246985725	No Hit
CCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC	566	0.1245313572597821	No Hit
AATGATACGGCGCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATG	483	0.10626969179589178	No Hit
AATGATACGGCCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGC	455	0.10010912995265168	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTAT	25	3.8870705E-5	45.000004	10
CGGTTAG	25	3.8870705E-5	45.000004	1
GAATCGT	25	3.8870705E-5	45.000004	29
CGCGATG	30	2.1625947E-6	45.000004	1
AAAGTCG	25	3.8870705E-5	45.000004	33
GTATGCG	45	3.8380676E-10	45.000004	1
TCTCGCG	30	2.1625947E-6	45.000004	1
ACGCTCT	25	3.8870705E-5	45.000004	45
TTAACGG	25	3.8870705E-5	45.000004	2
TTAGTTC	25	3.8870705E-5	45.000004	21
TTACGGA	25	3.8870705E-5	45.000004	40
ACGTATT	25	3.8870705E-5	45.000004	11
ACGTAAG	25	3.8870705E-5	45.000004	1
CGATAGG	30	2.1625947E-6	45.000004	2
GCGTACT	25	3.8870705E-5	45.000004	29
TAGTACG	30	2.1625947E-6	45.000004	1
AAGTCGA	25	3.8870705E-5	45.000004	34
GTCGCAT	20	7.028782E-4	45.0	41
GTACCAT	20	7.028782E-4	45.0	9
ATCTAGA	20	7.028782E-4	45.0	22