SRR3553069_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3553069_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	506219
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGCT	2805	0.5541080046383087	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	1888	0.37296110971733576	No Hit
AAACTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCT	766	0.1513179078620123	No Hit
AATCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCT	757	0.14954002121611398	No Hit
CCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTCTGC	663	0.13097098291450934	No Hit
AATGATACCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGT	636	0.12563732297681438	No Hit
AATGATACGGCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCC	630	0.12445206521288217	No Hit
CCACCTGGGAATGATACCTGTCTCTTATACACATCTGACGCCGCTAAATTC	514	0.10153708177685943	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGGA	20	7.02954E-4	45.000004	41
TCACGAT	35	1.2101191E-7	45.000004	11
ATTTACG	20	7.02954E-4	45.000004	45
TCGCATA	20	7.02954E-4	45.000004	29
CGAACCT	20	7.02954E-4	45.000004	45
AGTTTCG	20	7.02954E-4	45.000004	24
GACACGT	20	7.02954E-4	45.000004	33
CGCATAC	20	7.02954E-4	45.000004	30
CGGCACG	40	6.8012014E-9	45.000004	1
ATAGATC	20	7.02954E-4	45.000004	20
TTCCGTA	20	7.02954E-4	45.000004	26
ATGTCGT	20	7.02954E-4	45.000004	10
ATGTCGA	20	7.02954E-4	45.000004	12
GACCCGA	20	7.02954E-4	45.000004	14
GTTACCG	20	7.02954E-4	45.000004	39
CCGTAAG	20	7.02954E-4	45.000004	1
TCTACGT	20	7.02954E-4	45.000004	27
GTTCGAC	20	7.02954E-4	45.000004	11
CTACGTA	20	7.02954E-4	45.000004	34
TGCGATC	20	7.02954E-4	45.000004	20