SRR3552955_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3552955_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	704421
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT	4924	0.6990137999860878	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2403	0.3411312269225364	No Hit
AATGATACGGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCC	1779	0.2525478371598802	No Hit
AATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT	1645	0.2335251220505919	No Hit
AATGATACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGT	1543	0.21904514487785004	No Hit
AAACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT	1419	0.20144203537373248	No Hit
AAAAACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTT	973	0.13812762538311607	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACCGGC	25	3.8892613E-5	45.000004	15
TCTTGGC	35	1.2110286E-7	45.000004	17
TTAATCG	95	0.0	45.000004	20
ATAATCG	25	3.8892613E-5	45.000004	1
CACATCG	25	3.8892613E-5	45.000004	19
TAGCGAT	25	3.8892613E-5	45.000004	36
TCCTCGA	35	1.2110286E-7	45.000004	38
ATTCGAC	25	3.8892613E-5	45.000004	45
GTCTAGT	25	3.8892613E-5	45.000004	45
TTCAACG	25	3.8892613E-5	45.000004	1
ATATGCG	35	1.2110286E-7	45.000004	1
CACTGCG	50	2.1827873E-11	45.000004	1
ATGTCGT	25	3.8892613E-5	45.000004	38
TTATCGT	30	2.164299E-6	45.000004	17
CCTAAAC	25	3.8892613E-5	45.000004	34
TCGATAG	25	3.8892613E-5	45.000004	1
CCATGCG	25	3.8892613E-5	45.000004	1
TCGGACA	30	2.164299E-6	45.000004	43
CCGTAAG	25	3.8892613E-5	45.000004	22
GTTCGAC	35	1.2110286E-7	45.000004	38