##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552915_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 695084 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.40451945376386 31.0 31.0 34.0 30.0 34.0 2 31.598576574917566 31.0 31.0 34.0 30.0 34.0 3 31.771847719124594 31.0 31.0 34.0 30.0 34.0 4 35.587435475424556 37.0 35.0 37.0 33.0 37.0 5 35.175737033221885 37.0 35.0 37.0 32.0 37.0 6 35.196335982413636 37.0 35.0 37.0 32.0 37.0 7 35.15332966950757 37.0 35.0 37.0 32.0 37.0 8 35.506543094072086 37.0 35.0 37.0 33.0 37.0 9 36.382487584234426 39.0 37.0 39.0 32.0 39.0 10 36.04081089479833 38.0 35.0 39.0 31.0 39.0 11 36.27724850521663 38.0 35.0 39.0 32.0 39.0 12 35.861022552669894 37.0 35.0 39.0 31.0 39.0 13 35.59607903505188 37.0 35.0 39.0 30.0 39.0 14 36.59529207980618 38.0 35.0 40.0 31.0 41.0 15 36.705822605613136 38.0 35.0 40.0 31.0 41.0 16 36.72153005967624 38.0 35.0 40.0 31.0 41.0 17 36.71565307214667 38.0 35.0 40.0 31.0 41.0 18 36.50768684072716 38.0 35.0 40.0 31.0 41.0 19 36.559854636274174 38.0 35.0 40.0 31.0 41.0 20 36.51107492044127 38.0 35.0 40.0 31.0 41.0 21 36.589497096753774 38.0 35.0 40.0 31.0 41.0 22 36.533945537517766 38.0 35.0 40.0 31.0 41.0 23 36.498696560415716 38.0 35.0 40.0 31.0 41.0 24 36.11034062070196 38.0 34.0 40.0 30.0 41.0 25 36.23931208314391 38.0 35.0 40.0 30.0 41.0 26 36.08342732676914 38.0 35.0 40.0 30.0 41.0 27 35.97237743927353 38.0 34.0 40.0 30.0 41.0 28 35.94683520265177 38.0 34.0 40.0 30.0 41.0 29 35.71502580983018 38.0 34.0 40.0 29.0 41.0 30 35.726950987218814 38.0 34.0 40.0 29.0 41.0 31 35.52645147924567 38.0 34.0 40.0 29.0 41.0 32 35.51845388471034 38.0 34.0 40.0 29.0 41.0 33 35.376491186676716 38.0 34.0 40.0 28.0 41.0 34 35.16086257200568 37.0 34.0 40.0 27.0 41.0 35 35.18129751224313 37.0 34.0 40.0 27.0 41.0 36 34.81642650384702 37.0 33.0 40.0 25.0 41.0 37 34.85254156332184 37.0 33.0 40.0 26.0 41.0 38 34.78440879087995 37.0 33.0 40.0 26.0 41.0 39 34.690894913420536 37.0 33.0 40.0 25.0 41.0 40 34.44630720891288 37.0 33.0 40.0 24.0 41.0 41 34.477322165378574 37.0 33.0 40.0 24.0 41.0 42 34.50157534916643 37.0 33.0 40.0 25.0 41.0 43 34.370664552773476 37.0 33.0 40.0 24.0 41.0 44 34.26295239136565 36.0 33.0 40.0 24.0 41.0 45 34.020918335050155 36.0 33.0 40.0 23.0 41.0 46 33.91527786569681 36.0 33.0 40.0 23.0 41.0 47 33.8000874714423 36.0 33.0 39.0 23.0 41.0 48 33.77310943713278 36.0 33.0 39.0 23.0 41.0 49 33.68709537264561 36.0 33.0 39.0 23.0 41.0 50 33.459554528661286 35.0 32.0 39.0 22.0 40.0 51 31.40114144477502 34.0 29.0 38.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 4.0 10 6.0 11 6.0 12 23.0 13 26.0 14 49.0 15 69.0 16 151.0 17 305.0 18 619.0 19 1173.0 20 1868.0 21 2646.0 22 3815.0 23 4891.0 24 6093.0 25 7048.0 26 8422.0 27 10179.0 28 12593.0 29 15945.0 30 20167.0 31 25397.0 32 33014.0 33 44611.0 34 72100.0 35 76144.0 36 66870.0 37 87444.0 38 110320.0 39 83081.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.4032433490053 36.513140857795605 20.36372582306599 24.719889970133107 2 20.741378020498242 34.78370959481156 20.77029538875877 23.704616995931428 3 20.181877298283375 30.50580936980279 24.878863561814114 24.43344977009973 4 23.271288074534876 30.721466757974575 18.854124105863466 27.153121061627083 5 16.95895747852058 37.34498276467305 18.63976152522573 27.056298231580644 6 20.8265475827382 35.99823906175369 22.154013040150545 21.021200315357568 7 78.74242537592579 10.091010582893578 6.110916090717093 5.055647950463541 8 81.26269630720891 5.304250997001801 4.817115629190141 8.615937066599146 9 76.14417825759189 9.890027680107728 8.562993825206737 5.402800237093646 10 43.991517571976914 29.862865495393365 12.471298432995148 13.674318499634577 11 34.646603863705685 23.5944144880331 24.208009391670647 17.55097225659057 12 32.776326314517384 22.31528851189209 28.06639197564611 16.841993197944422 13 25.173791944570727 32.732734460870915 22.368231753284494 19.72524184127386 14 17.893520783099596 32.85056194646978 31.057541246813336 18.19837602361729 15 16.06582801503128 27.192540757663824 34.01847834218598 22.72315288511892 16 18.008902521134136 25.911544503973623 33.81807090941527 22.26148206547698 17 18.498627504013903 25.738040294410457 27.196569047769763 28.56676315380587 18 21.236282233514224 26.467736273601467 27.718088748985735 24.57789274389858 19 23.526221291239622 29.51815895632758 27.163335654395727 19.792284098037072 20 27.174125717179503 29.615844991396724 24.217936249431723 18.992093041992046 21 21.45309056171628 29.042389121314834 25.167030171892897 24.33749014507599 22 21.15140040628183 28.238889112682784 25.70164181595318 24.908068665082205 23 22.457285738126615 27.29439895034269 22.519148764753613 27.72916654677708 24 19.64352509912471 31.344556916861848 26.705549257355944 22.306368726657496 25 20.525432897318886 25.713007348752093 26.684544601803523 27.0770151521255 26 21.810313573611246 32.86940858946545 21.662273912217803 23.658003924705504 27 18.41906877442151 30.043850815153277 26.921925983046652 24.61515442737856 28 19.405855982874012 28.343049185422192 27.10607638788981 25.14501844381398 29 20.74238509302473 29.484206225434622 27.486030465382598 22.287378216158046 30 24.567534283626152 27.31669841342917 24.812828377577386 23.302938925367293 31 26.00103009132709 29.429248838989245 19.847529219490017 24.722191850193646 32 29.79222655103556 25.866226240281748 21.07155394168187 23.269993267000824 33 26.21927709456699 25.93916706470009 24.076226758204765 23.765329082528154 34 20.806262264704696 31.2071634507484 22.207531751558086 25.779042532988818 35 25.93700905214334 25.667401350052653 24.769811993946057 23.62577760385795 36 25.989520691024392 27.6291786316474 25.489149512864635 20.892151164463577 37 26.634910312998137 28.727175420524713 22.359024233042337 22.27889003343481 38 25.35664754187983 25.904351128784437 24.79484493960442 23.944156389731315 39 25.921327494230912 26.39867987178528 25.673156050204003 22.0068365837798 40 26.228916217320496 26.46226930845768 23.922576264163755 23.386238210058067 41 21.215853047976935 24.956408146353535 28.12422671216716 25.70351209350237 42 27.926265026960774 24.01796041917236 22.72890758527027 25.3268669685966 43 23.856828814934598 23.459035166972626 26.48039661393443 26.203739404158345 44 22.80587669979456 24.255629535423058 25.312911820729582 27.625581944052808 45 25.0759620419978 28.137174787507696 23.476730869938024 23.31013230055648 46 21.53739691893354 25.647116032019152 29.997381611431134 22.818105437616172 47 22.367224680758007 27.029826610884438 25.10933930287562 25.493609405481926 48 22.847166673380485 22.508502569473617 30.885763447295577 23.75856730985032 49 23.429542328696964 21.940082062024157 29.147700134084513 25.482675475194366 50 22.32622244217965 24.022851914301004 25.356072071864695 28.29485357165465 51 19.903493678461885 24.882172514401137 29.42378187384546 25.790551933291518 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2424.0 1 2029.5 2 1635.0 3 1218.5 4 802.0 5 743.5 6 685.0 7 794.5 8 904.0 9 964.0 10 1024.0 11 1087.5 12 1151.0 13 1242.5 14 1334.0 15 1429.5 16 1525.0 17 1685.0 18 1845.0 19 1837.5 20 1830.0 21 2017.0 22 2204.0 23 2701.0 24 3198.0 25 3131.0 26 3929.5 27 4795.0 28 4856.0 29 4917.0 30 7084.5 31 9252.0 32 10764.0 33 12276.0 34 12151.5 35 12027.0 36 14359.5 37 16692.0 38 19214.5 39 21737.0 40 25990.5 41 30244.0 42 34756.0 43 39268.0 44 44619.5 45 49971.0 46 60041.0 47 70111.0 48 69920.5 49 69730.0 50 67960.0 51 66190.0 52 60613.0 53 55036.0 54 50237.0 55 45438.0 56 40025.0 57 34612.0 58 31345.0 59 28078.0 60 27055.5 61 26033.0 62 23552.5 63 21072.0 64 18669.5 65 16267.0 66 13715.0 67 11163.0 68 9804.0 69 8445.0 70 6997.0 71 5549.0 72 4692.5 73 3836.0 74 3561.5 75 2832.0 76 2377.0 77 1909.0 78 1441.0 79 1054.5 80 668.0 81 489.5 82 311.0 83 229.5 84 148.0 85 174.0 86 200.0 87 190.5 88 181.0 89 121.5 90 62.0 91 41.5 92 21.0 93 17.0 94 13.0 95 9.5 96 6.0 97 5.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 695084.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.71837378933237 #Duplication Level Percentage of deduplicated Percentage of total 1 78.54431792575588 20.200321274427484 2 9.779684131331395 5.030351440623662 3 3.573289430561921 2.756975796979863 4 1.6874000537120626 1.735887412540254 5 0.892353798483308 1.1474944270862144 6 0.5608368362714298 0.8654286834033138 7 0.37499538903082014 0.6750990109059518 8 0.2754980739208624 0.5668289954670288 9 0.1958762639791938 0.45338570761273617 >10 2.2383571424016155 14.186433530159837 >50 1.1507669881941824 21.781659797362092 >100 0.7188108054287619 24.929125928719152 >500 0.0033484975408172133 0.6543525966919073 >1k 0.002790414617347678 1.5829907411526751 >5k 0.0016742487704086066 3.433664656867843 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AATGATACGGCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCC 9256 1.3316376150220692 No Hit AATGATACCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGT 7429 1.0687916856092212 No Hit AATCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCT 7238 1.0413129923865319 No Hit CTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTGCT 4851 0.6979012608548032 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2000 0.2877350075674307 No Hit AATGACTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTT 1635 0.2352233686863746 No Hit AATGATCTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCT 1396 0.20083903528206665 No Hit AAACTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCT 1147 0.1650160268399215 No Hit AACTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTTCTG 991 0.1425726962496619 No Hit AATGATACGGCGACTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTAT 859 0.12358218575021149 No Hit AAAAACTGTCTCTTATACACATCTGACGCCAGCGTAGTCGTATGCCGTCTT 748 0.10761289283021908 No Hit ACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATACA 718 0.10329686771670762 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.0226102168946487 0.0 2 2.877350075674307E-4 0.0 0.0 1.2368289300286008 0.0 3 2.877350075674307E-4 0.0 0.0 1.70727566740135 0.0 4 2.877350075674307E-4 0.0 0.0 4.279770502557964 0.0 5 2.877350075674307E-4 0.0 0.0 4.5374372018345985 0.0 6 2.877350075674307E-4 0.0 0.0 5.8050537776729145 0.0 7 2.877350075674307E-4 0.0 0.0 6.843633287487555 0.0 8 2.877350075674307E-4 0.0 0.0 7.372490231396493 0.0 9 2.877350075674307E-4 0.0 0.0 9.5156844352625 0.0 10 2.877350075674307E-4 0.0 0.0 10.756253920389478 0.0 11 2.877350075674307E-4 0.0 0.0 13.654896386623776 0.0 12 2.877350075674307E-4 0.0 0.0 14.378262195648295 0.0 13 2.877350075674307E-4 0.0 0.0 14.70095700663517 0.0 14 2.877350075674307E-4 0.0 0.0 15.140040628183069 0.0 15 2.877350075674307E-4 0.0 0.0 15.417417175478072 0.0 16 2.877350075674307E-4 0.0 0.0 15.894625685528656 0.0 17 2.877350075674307E-4 0.0 0.0 16.50002014145053 0.0 18 2.877350075674307E-4 0.0 0.0 17.27302023928043 0.0 19 2.877350075674307E-4 0.0 0.0 17.648658291659714 0.0 20 2.877350075674307E-4 0.0 0.0 17.987897865581715 0.0 21 2.877350075674307E-4 0.0 0.0 18.355047735237754 0.0 22 2.877350075674307E-4 0.0 0.0 18.73039805260947 0.0 23 2.877350075674307E-4 0.0 0.0 19.090786149587675 0.0 24 2.877350075674307E-4 0.0 0.0 19.351042463932416 0.0 25 2.877350075674307E-4 0.0 0.0 19.565117309562584 0.0 26 2.877350075674307E-4 0.0 0.0 19.780630830230592 0.0 27 2.877350075674307E-4 0.0 0.0 20.023191441609935 0.0 28 2.877350075674307E-4 0.0 0.0 20.236834684728752 0.0 29 2.877350075674307E-4 0.0 0.0 20.464145340707024 0.0 30 2.877350075674307E-4 0.0 0.0 20.777488763947954 0.0 31 2.877350075674307E-4 0.0 0.0 21.001058864827847 0.0 32 2.877350075674307E-4 0.0 0.0 21.223478025677473 0.0 33 2.877350075674307E-4 0.0 0.0 21.45956459938655 0.0 34 2.877350075674307E-4 0.0 0.0 21.676804530099957 0.0 35 2.877350075674307E-4 0.0 0.0 21.944541954641455 0.0 36 2.877350075674307E-4 0.0 0.0 22.16739271800243 0.0 37 4.3160251135114606E-4 0.0 0.0 22.414269354495286 0.0 38 4.3160251135114606E-4 0.0 0.0 22.65222620575355 0.0 39 4.3160251135114606E-4 0.0 0.0 22.922265510355583 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTT 30 2.1642572E-6 45.000004 42 TCCGCAA 30 2.1642572E-6 45.000004 17 GTCGAAC 30 2.1642572E-6 45.000004 40 TGCTTCG 35 1.2109922E-7 45.000004 1 ATTGTCG 30 2.1642572E-6 45.000004 45 TTGTACT 30 2.1642572E-6 45.000004 41 GCGCATC 30 2.1642572E-6 45.000004 39 GACCCGA 30 2.1642572E-6 45.000004 9 GGCCCAC 35 1.2109922E-7 45.000004 9 CTACGAA 30 2.1642572E-6 45.000004 10 TCGCTAT 30 2.1642572E-6 45.000004 38 CTCGACC 35 1.2109922E-7 45.000004 29 TGAGGTC 30 2.1642572E-6 45.000004 17 TACTACG 55 1.8189894E-12 45.000004 1 CACCGTC 55 1.8189894E-12 45.000004 29 TAGTGCG 30 2.1642572E-6 45.000004 1 GATTCGT 30 2.1642572E-6 45.000004 7 TCGACTT 30 2.1642572E-6 45.000004 36 TCGACGG 30 2.1642572E-6 45.000004 2 TCGACGA 30 2.1642572E-6 45.000004 44 >>END_MODULE