##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552903_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 954201 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.49368424472412 31.0 31.0 34.0 30.0 34.0 2 31.676765167925836 31.0 31.0 34.0 30.0 34.0 3 31.876543830911935 33.0 31.0 34.0 30.0 34.0 4 35.70566369140254 37.0 35.0 37.0 35.0 37.0 5 35.318541900501046 37.0 35.0 37.0 33.0 37.0 6 35.33964122863003 37.0 35.0 37.0 33.0 37.0 7 35.372464501714 37.0 35.0 37.0 33.0 37.0 8 35.66127681693899 37.0 35.0 37.0 35.0 37.0 9 36.53310151634719 39.0 37.0 39.0 33.0 39.0 10 36.191446037050895 38.0 35.0 39.0 31.0 39.0 11 36.41721817520627 38.0 35.0 39.0 32.0 39.0 12 36.142107375699666 37.0 35.0 39.0 32.0 39.0 13 35.95718302537935 38.0 35.0 39.0 31.0 39.0 14 37.02227622901255 39.0 35.0 40.0 32.0 41.0 15 36.991884309490345 39.0 35.0 40.0 32.0 41.0 16 37.01695764309616 39.0 35.0 40.0 32.0 41.0 17 36.96948546480249 38.0 35.0 40.0 32.0 41.0 18 36.84457467556626 38.0 35.0 40.0 31.0 41.0 19 36.906068008731914 39.0 35.0 40.0 31.0 41.0 20 36.87005568009256 39.0 35.0 40.0 31.0 41.0 21 36.874579884112464 39.0 35.0 40.0 31.0 41.0 22 36.818453344735545 39.0 35.0 40.0 31.0 41.0 23 36.78977280468161 39.0 35.0 40.0 31.0 41.0 24 36.477492687599366 38.0 35.0 40.0 31.0 41.0 25 36.569190348783955 38.0 35.0 40.0 31.0 41.0 26 36.46448809003554 38.0 35.0 40.0 31.0 41.0 27 36.29687350987894 38.0 35.0 40.0 30.0 41.0 28 36.246813826436984 38.0 35.0 40.0 30.0 41.0 29 36.05159080738754 38.0 35.0 40.0 30.0 41.0 30 35.94983551683555 38.0 35.0 40.0 30.0 41.0 31 35.84935354291182 38.0 34.0 40.0 29.0 41.0 32 35.75735301052923 38.0 34.0 40.0 29.0 41.0 33 35.72389150713529 38.0 34.0 40.0 29.0 41.0 34 35.5939450912334 38.0 34.0 40.0 29.0 41.0 35 35.48950483179121 38.0 34.0 40.0 28.0 41.0 36 35.284047071843354 38.0 34.0 40.0 27.0 41.0 37 35.10080475706901 37.0 34.0 40.0 27.0 41.0 38 35.09985946357214 37.0 34.0 40.0 27.0 41.0 39 35.13072612583722 37.0 34.0 40.0 27.0 41.0 40 35.02192305394775 37.0 34.0 40.0 27.0 41.0 41 35.04490563308988 37.0 34.0 40.0 27.0 41.0 42 34.953702626595444 37.0 34.0 40.0 27.0 41.0 43 34.8717995474748 37.0 33.0 40.0 26.0 41.0 44 34.6806438056552 37.0 33.0 40.0 26.0 41.0 45 34.530026692489315 36.0 33.0 40.0 26.0 41.0 46 34.438402391110465 36.0 33.0 40.0 25.0 41.0 47 34.302950845786164 36.0 33.0 40.0 24.0 41.0 48 34.24745729673308 36.0 33.0 40.0 24.0 41.0 49 34.08230760604946 36.0 33.0 39.0 24.0 41.0 50 33.87666959057893 35.0 33.0 39.0 24.0 41.0 51 31.92773535135679 35.0 30.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 9.0 10 20.0 11 22.0 12 26.0 13 42.0 14 62.0 15 117.0 16 199.0 17 420.0 18 697.0 19 1200.0 20 1984.0 21 2939.0 22 4207.0 23 5483.0 24 7000.0 25 8462.0 26 10199.0 27 12387.0 28 15386.0 29 19613.0 30 24560.0 31 31548.0 32 41044.0 33 56692.0 34 91945.0 35 96607.0 36 98260.0 37 131003.0 38 168231.0 39 123826.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.350533063788447 31.183262226721624 20.51559367470795 26.95061103478198 2 22.852103487629964 30.648993241465895 21.125318460156716 25.373584810747424 3 21.518841418107925 30.987181945942204 21.271514073030733 26.222462562919134 4 21.134226436568397 32.11294056493338 19.55458021947158 27.198252779026642 5 19.061183125987082 34.52333418221109 18.279377196209186 28.136105495592652 6 20.96350768863164 36.98518446323154 19.442025317516958 22.609282530619858 7 83.95600088450966 6.24061387485446 5.25203809260313 4.551347148032752 8 86.30477226496305 4.875911888585319 4.173020149842643 4.646295696608995 9 78.78182898571686 9.751299778558186 7.246586411039184 4.220284824685784 10 45.0701686541934 28.826211668191505 11.666724306514038 14.436895371101057 11 35.18483003057008 25.432063055897032 21.36143223492744 18.02167467860545 12 34.0537266257319 22.277486609215458 25.148579806560672 18.520206958491976 13 26.746985173983262 27.286913344253467 23.3732725075744 22.592828974188876 14 20.951036521655293 29.183473922161053 27.67215712412793 22.19333243205572 15 20.933010969386952 26.570188042142064 30.746142584214436 21.750658404256544 16 22.834077935361627 23.618818257369252 30.66282680483462 22.884277002434498 17 21.8455021531103 25.44830701288303 26.958785413136226 25.747405420870447 18 24.41183775745362 25.653714468964083 25.70359913686949 24.23084863671281 19 26.088738117021464 28.353879318927568 24.244786999804024 21.312595564246948 20 29.127301270906237 26.498924230848637 23.1065572138365 21.26721728440863 21 25.466018165983893 28.596071477602724 23.365307728665137 22.572602627748243 22 23.620809452096573 26.64690143900499 24.987293033648047 24.74499607525039 23 25.030365719591575 26.484252269699986 22.610749726734724 25.874632283973714 24 23.356714151420928 26.41194046118166 26.600370362219284 23.630975025178135 25 24.42147933192273 25.1699589499487 24.544304606681404 25.86425711144717 26 25.747929419482894 28.23681802890586 22.536341923766585 23.478910627844655 27 22.995679107441724 26.70726607915942 25.077315995267245 25.21973881813161 28 23.202344160192663 27.939082017310817 26.67268217073761 22.185891651758908 29 24.899156467033677 27.249919042214376 24.570399737581493 23.280524753170454 30 25.562538710397494 26.24394650602965 25.101839130329985 23.09167565324287 31 28.028580980317564 27.140403332211978 21.0105627640298 23.82045292344066 32 28.182741372100846 25.303054597511426 24.755895246389386 21.75830878399834 33 27.675301115802647 25.83585638665229 24.198675121908277 22.290167375636788 34 24.408693765778906 25.925040950491564 25.296557014717024 24.369708269012506 35 25.596703419929344 25.539587571172113 26.598169568046988 22.265539440851562 36 26.601313559721696 27.3071396906941 24.946421141876815 21.145125607707392 37 24.053841905426633 29.689342182621903 24.13422329257672 22.122592619374746 38 24.770357608093054 28.037174557561773 25.105716720062127 22.08675111428305 39 24.178553575190133 25.911731385735294 26.174359490296066 23.735355548778507 40 24.95134672883386 24.657069108081 24.811124700141793 25.580459462943345 41 21.099432928701606 24.0238691847944 27.22843509910386 27.648262787400142 42 24.61242442630012 25.70800072521408 24.461198426746567 25.218376421739237 43 23.62342944515883 24.501441520182855 26.448410764608294 25.42671827005002 44 24.031309965091214 23.86792719772878 26.252330483828878 25.848432353351132 45 25.390247966623384 24.70380978431169 25.866667505064445 24.039274744000476 46 22.00951371880767 24.692491414282735 28.7199447495863 24.57805011732329 47 23.58591114450729 24.995153012834823 25.73399105639168 25.684944786266207 48 23.35524695530606 22.65602320685055 29.448302820894128 24.54042701694926 49 23.600583105655936 23.008150274418075 27.80567197058062 25.585594649345367 50 21.37882898886084 25.068408018855564 26.18064747364549 27.372115518638108 51 22.073231950081794 24.30986762747052 27.969893135722977 25.647007286724705 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1921.0 1 1687.5 2 1454.0 3 1122.0 4 790.0 5 824.0 6 858.0 7 899.5 8 941.0 9 1059.5 10 1178.0 11 1308.5 12 1439.0 13 1585.0 14 1731.0 15 1674.5 16 1618.0 17 1671.0 18 1724.0 19 1811.5 20 1899.0 21 1800.0 22 1701.0 23 2557.5 24 3414.0 25 3492.5 26 4362.5 27 5154.0 28 6510.5 29 7867.0 30 8636.5 31 9406.0 32 11642.5 33 13879.0 34 16990.0 35 20101.0 36 20995.5 37 21890.0 38 25214.0 39 28538.0 40 33834.5 41 39131.0 42 48339.5 43 57548.0 44 65862.5 45 74177.0 46 78219.0 47 82261.0 48 79082.0 49 75903.0 50 70984.5 51 66066.0 52 61336.5 53 56607.0 54 54776.5 55 52946.0 56 52443.5 57 51941.0 58 51481.5 59 51022.0 60 51807.5 61 52593.0 62 49718.0 63 46843.0 64 40908.5 65 34974.0 66 29588.0 67 24202.0 68 20514.5 69 16827.0 70 14862.0 71 12897.0 72 11246.0 73 9595.0 74 8003.5 75 5635.5 76 4859.0 77 3816.0 78 2773.0 79 2193.5 80 1614.0 81 1221.0 82 828.0 83 680.5 84 533.0 85 384.5 86 236.0 87 196.0 88 156.0 89 139.5 90 123.0 91 78.0 92 33.0 93 24.0 94 15.0 95 11.0 96 7.0 97 5.5 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 954201.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.087341964090484 #Duplication Level Percentage of deduplicated Percentage of total 1 78.2984854509537 21.991963361313 2 9.693110396621757 5.445074128111921 3 3.2194512069574333 2.712774809595518 4 1.4512516279514207 1.6304720300085829 5 0.8211944438753795 1.153258458206945 6 0.4678907191606605 0.7885083978533818 7 0.32270871796893336 0.6344821081470663 8 0.2916042391964819 0.655231038759202 9 0.22299094312189688 0.5636900586923792 >10 3.494128386357494 24.992703441696815 >50 1.4983054624383316 29.390096046559865 >100 0.21372832526959712 8.053090241811487 >500 0.0029429029297018527 0.5909036719174745 >1k 0.0022071771972763895 1.397752207326385 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCT 4858 0.5091170518580467 No Hit AATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT 2453 0.25707371926879136 No Hit AATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCC 2010 0.21064744220557302 No Hit AATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGT 1702 0.1783691276785499 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1499 0.15709478401301194 No Hit AAACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT 1006 0.10542852082527686 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0479972249033485E-4 0.0 0.0 0.6871717803691256 0.0 2 1.0479972249033485E-4 0.0 0.0 0.8983432211871503 0.0 3 1.0479972249033485E-4 0.0 0.0 1.190210448322733 0.0 4 1.0479972249033485E-4 0.0 0.0 2.614648276411364 0.0 5 1.0479972249033485E-4 0.0 0.0 2.789663812970223 0.0 6 1.0479972249033485E-4 0.0 0.0 3.8578873843142065 0.0 7 1.0479972249033485E-4 0.0 0.0 4.7161971115100485 0.0 8 1.0479972249033485E-4 0.0 0.0 5.240614922851685 0.0 9 1.0479972249033485E-4 0.0 0.0 6.214099545064404 0.0 10 1.0479972249033485E-4 0.0 0.0 7.405986788946983 0.0 11 1.0479972249033485E-4 0.0 0.0 8.903050824721417 0.0 12 1.0479972249033485E-4 0.0 0.0 9.545682723032149 0.0 13 1.0479972249033485E-4 0.0 0.0 9.815961207334723 0.0 14 1.0479972249033485E-4 0.0 0.0 10.140001949274838 0.0 15 2.095994449806697E-4 0.0 0.0 10.366788548743923 0.0 16 2.095994449806697E-4 0.0 0.0 10.825706533529099 0.0 17 2.095994449806697E-4 0.0 0.0 11.35777472461253 0.0 18 2.095994449806697E-4 0.0 0.0 11.939517984156378 0.0 19 2.095994449806697E-4 0.0 0.0 12.257270742747073 0.0 20 2.095994449806697E-4 0.0 0.0 12.574185103557845 0.0 21 2.095994449806697E-4 0.0 0.0 12.94171773033145 0.0 22 2.095994449806697E-4 0.0 0.0 13.324970315478605 0.0 23 2.095994449806697E-4 0.0 0.0 13.71136689230047 0.0 24 2.095994449806697E-4 0.0 0.0 14.01853487891964 0.0 25 2.095994449806697E-4 0.0 0.0 14.275398998743452 0.0 26 2.095994449806697E-4 0.0 0.0 14.501871199045064 0.0 27 2.095994449806697E-4 0.0 0.0 14.741548164380461 0.0 28 2.095994449806697E-4 0.0 0.0 14.975565944701378 0.0 29 2.095994449806697E-4 0.0 0.0 15.22331248866853 0.0 30 2.095994449806697E-4 0.0 0.0 15.53320526807245 0.0 31 3.1439916747100455E-4 0.0 0.0 15.791326984566146 0.0 32 3.1439916747100455E-4 0.0 0.0 16.045571111327696 0.0 33 3.1439916747100455E-4 0.0 0.0 16.310504809783264 0.0 34 3.1439916747100455E-4 0.0 0.0 16.57292331489906 0.0 35 3.1439916747100455E-4 0.0 0.0 16.854520169230593 0.0 36 3.1439916747100455E-4 0.0 0.0 17.11966346713114 0.0 37 3.1439916747100455E-4 0.0 0.0 17.386797959759004 0.0 38 3.1439916747100455E-4 0.0 0.0 17.66451722435839 0.0 39 3.1439916747100455E-4 0.0 0.0 17.953869258154203 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAC 35 1.211647E-7 45.000004 19 ACCGGAC 35 1.211647E-7 45.000004 34 TCCGATC 20 7.032683E-4 45.000004 17 GCACGTA 20 7.032683E-4 45.000004 39 CGATTGT 20 7.032683E-4 45.000004 12 TAACGTG 20 7.032683E-4 45.000004 45 TTATACG 20 7.032683E-4 45.000004 1 TACGCTT 35 1.211647E-7 45.000004 23 CTAACCG 40 6.8121153E-9 45.000004 1 CGTAGAT 20 7.032683E-4 45.000004 34 TTGCGCA 20 7.032683E-4 45.000004 10 AACTCGT 20 7.032683E-4 45.000004 20 CACGTAT 20 7.032683E-4 45.000004 40 CGATATA 20 7.032683E-4 45.000004 21 TGTCGAT 20 7.032683E-4 45.000004 18 TAATGCG 20 7.032683E-4 45.000004 1 TCGAACA 20 7.032683E-4 45.000004 14 GTTATAG 20 7.032683E-4 45.000004 1 ATCGATC 20 7.032683E-4 45.000004 30 TCTAGCG 25 3.890307E-5 45.0 1 >>END_MODULE