##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552902_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 981524 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27411352142179 31.0 31.0 34.0 28.0 34.0 2 31.49305569705886 31.0 31.0 34.0 30.0 34.0 3 31.45748550213749 31.0 31.0 34.0 28.0 34.0 4 35.482829762695566 37.0 35.0 37.0 33.0 37.0 5 35.175294745721956 37.0 35.0 37.0 32.0 37.0 6 35.23654235658017 37.0 35.0 37.0 32.0 37.0 7 35.223741854503814 37.0 35.0 37.0 33.0 37.0 8 35.58033934982741 37.0 35.0 37.0 35.0 37.0 9 36.04893614420024 39.0 37.0 39.0 32.0 39.0 10 35.87138572261096 38.0 35.0 39.0 30.0 39.0 11 36.246886474502915 38.0 35.0 39.0 32.0 39.0 12 36.0361600938948 37.0 35.0 39.0 32.0 39.0 13 35.831032150003466 37.0 35.0 39.0 31.0 39.0 14 36.89598114768462 39.0 35.0 40.0 31.0 41.0 15 36.89270868567656 38.0 35.0 40.0 31.0 41.0 16 36.92881070661543 38.0 35.0 40.0 32.0 41.0 17 36.885783740387396 38.0 35.0 40.0 32.0 41.0 18 36.79513491264605 38.0 35.0 40.0 31.0 41.0 19 36.83559342410374 39.0 35.0 40.0 31.0 41.0 20 36.7844515264018 38.0 35.0 40.0 31.0 41.0 21 36.77806757654423 38.0 35.0 40.0 31.0 41.0 22 36.741685379063576 38.0 35.0 40.0 31.0 41.0 23 36.72361857682542 38.0 35.0 40.0 31.0 41.0 24 36.35621849287435 38.0 35.0 40.0 30.0 41.0 25 36.49956292459481 38.0 35.0 40.0 31.0 41.0 26 36.38548013089848 38.0 35.0 40.0 30.0 41.0 27 36.232471136722076 38.0 35.0 40.0 30.0 41.0 28 36.15458918987208 38.0 35.0 40.0 30.0 41.0 29 35.97025849597157 38.0 35.0 40.0 30.0 41.0 30 35.91046882195443 38.0 34.0 40.0 30.0 41.0 31 35.86532881518944 38.0 34.0 40.0 30.0 41.0 32 35.76396399884262 38.0 34.0 40.0 29.0 41.0 33 35.6740446489337 38.0 34.0 40.0 29.0 41.0 34 35.616498424898424 38.0 34.0 40.0 29.0 41.0 35 35.46847962963717 38.0 34.0 40.0 28.0 41.0 36 35.31193735456291 38.0 34.0 40.0 27.0 41.0 37 35.13136510161748 37.0 34.0 40.0 27.0 41.0 38 35.131392609859766 37.0 34.0 40.0 27.0 41.0 39 35.116939575598764 37.0 34.0 40.0 27.0 41.0 40 34.960223081656686 37.0 34.0 40.0 26.0 41.0 41 34.980787021 37.0 34.0 40.0 27.0 41.0 42 34.94943475656224 37.0 34.0 40.0 27.0 41.0 43 34.891794800738445 37.0 33.0 40.0 27.0 41.0 44 34.79781849450446 37.0 33.0 40.0 26.0 41.0 45 34.66047901019231 37.0 33.0 40.0 26.0 41.0 46 34.485533721029746 36.0 33.0 40.0 26.0 41.0 47 34.31721486178637 36.0 33.0 40.0 25.0 41.0 48 34.21595294664216 36.0 33.0 39.0 24.0 41.0 49 34.05541790114149 36.0 33.0 39.0 24.0 41.0 50 33.93982928588603 35.0 33.0 39.0 24.0 40.0 51 32.112864280445514 35.0 30.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 8.0 9 19.0 10 19.0 11 27.0 12 28.0 13 38.0 14 64.0 15 138.0 16 228.0 17 408.0 18 788.0 19 1311.0 20 2108.0 21 2965.0 22 4204.0 23 5579.0 24 7020.0 25 8435.0 26 10334.0 27 12736.0 28 16333.0 29 20560.0 30 26086.0 31 33563.0 32 44082.0 33 61072.0 34 96014.0 35 100226.0 36 104609.0 37 138211.0 38 168669.0 39 115636.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.60966007963127 30.957572102159496 20.528789922610144 26.90397789559909 2 22.90193617272731 30.477400450727643 21.17452043964284 25.446142936902206 3 21.891364857099777 30.929045036086737 21.10462912776458 26.074960979048907 4 21.178799499553755 32.21979289350031 19.445780235633567 27.15562737131237 5 19.179867226883907 34.51051629914297 18.155439907735317 28.15417656623781 6 21.04849193702854 37.02955811574653 19.301209140071972 22.62074080715296 7 84.13039314372344 6.286754068163387 5.062739168884307 4.520113619228873 8 86.55641634845404 4.90308948125568 4.07417444708433 4.466319723205953 9 78.20471022613813 10.712422722215656 6.934216585636214 4.148650466010001 10 45.270721857030495 28.858693215856157 11.573940117613018 14.296644809500329 11 35.360419103353564 25.522452838646835 21.177780675765444 17.939347382234157 12 34.17807409701648 22.360125682102527 24.97860470044543 18.483195520435565 13 26.85324047094111 27.339728829860505 23.32454428011949 22.4824864190789 14 21.091791948031833 29.16668364706314 27.478085100313386 22.263439304591635 15 21.037182992978266 26.512647678508117 30.77245181982305 21.677717508690566 16 22.965408894739202 23.467790904756278 30.791809471800995 22.774990728703525 17 21.996711236811326 25.326940553669598 26.905302366523898 25.77104584299518 18 24.421715617753616 25.605385095015503 25.74435265974138 24.228546627489497 19 26.256821025262756 28.244342471503497 24.162934375522145 21.335902127711602 20 29.216809777448134 26.478109552084312 22.982321369625193 21.322759300842364 21 25.57156014524352 28.458601114185694 23.41746100961362 22.552377730957165 22 23.7720116879465 26.55044604105452 24.990932468284015 24.686609802714962 23 25.112987558123894 26.463234724774942 22.617582453409188 25.806195263691972 24 23.440180780092998 26.249994905881056 26.783349159062848 23.526475154963098 25 24.52400552610023 25.24543465060457 24.54295564856285 25.687604174732353 26 25.60497756550018 28.378419682045475 22.619416336228152 23.397186416226194 27 22.97243877887856 26.72018208418745 25.188788047974377 25.11859108895962 28 23.13708070306992 27.986172523545015 26.807189635709367 22.069557137675698 29 24.867247260382833 27.329133062462045 24.61366201947176 23.189957657683358 30 25.546598962429854 26.277503148165504 25.014365415415213 23.16153247398943 31 27.99014593631944 27.176717023730447 21.132748664322012 23.700388375628105 32 28.248112119520258 25.458470704740794 24.61753354986735 21.675883625871602 33 27.772525175135808 25.93986494471862 24.100378594919736 22.187231285225835 34 24.48325257456771 26.06650474160591 25.288836543986697 24.161406139839677 35 25.50360459856305 25.60966415492642 26.584169108447682 22.302562138062846 36 26.49981049877537 27.490820397667303 24.76954205908363 21.239827044473696 37 24.041999991849412 29.83951487686496 24.12961883764432 21.98886629364132 38 24.78869594630391 28.03558547727819 25.013550356384563 22.162168220033333 39 24.293547585183855 26.121521226174803 25.962992244713323 23.621938943928015 40 25.041669892941997 24.74559970005828 24.811008187267962 25.401722219731766 41 21.124292426879016 24.33022524156312 27.08991323696619 27.455569094591674 42 24.39736572921294 25.823311503335628 24.484373280734857 25.29494948671658 43 23.691015196775627 24.762104645428945 26.377144114662503 25.16973604313292 44 24.0507618764289 24.141437193588747 26.17939041735098 25.628410512631376 45 25.268663832978106 25.06418589866371 25.743028188816574 23.92412207954161 46 22.208626584780404 24.87947314584259 28.470725117266614 24.441175152110393 47 23.509460797698274 25.359644797274445 25.69341147032574 25.437482934701546 48 23.40869912503413 22.865971692999864 29.217624836478784 24.507704345487223 49 23.66819354391742 23.270240972202412 27.607068191913797 25.454497291966373 50 21.4388033303312 25.46539870650132 26.103386162742837 26.992411800424648 51 22.045614778650343 24.688443685533926 27.729428928890176 25.536512606925555 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2071.0 1 1813.5 2 1556.0 3 1173.0 4 790.0 5 828.0 6 866.0 7 950.0 8 1034.0 9 1090.5 10 1147.0 11 1307.5 12 1468.0 13 1602.5 14 1737.0 15 1643.0 16 1549.0 17 1673.0 18 1797.0 19 1828.5 20 1860.0 21 1836.5 22 1813.0 23 2742.0 24 3671.0 25 3740.0 26 4594.5 27 5380.0 28 6863.0 29 8346.0 30 9132.0 31 9918.0 32 12279.0 33 14640.0 34 17731.0 35 20822.0 36 22168.0 37 23514.0 38 26662.5 39 29811.0 40 35089.0 41 40367.0 42 49404.0 43 58441.0 44 67311.0 45 76181.0 46 79847.5 47 83514.0 48 80233.5 49 76953.0 50 72201.0 51 67449.0 52 62723.5 53 57998.0 54 56242.0 55 54486.0 56 54129.0 57 53772.0 58 53010.5 59 52249.0 60 53303.0 61 54357.0 62 51261.0 63 48165.0 64 42265.0 65 36365.0 66 30633.5 67 24902.0 68 21293.0 69 17684.0 70 15310.5 71 12937.0 72 11421.0 73 9905.0 74 8375.0 75 5907.5 76 4970.0 77 3914.5 78 2859.0 79 2255.0 80 1651.0 81 1211.0 82 771.0 83 647.0 84 523.0 85 392.0 86 261.0 87 210.5 88 160.0 89 132.0 90 104.0 91 67.5 92 31.0 93 22.5 94 14.0 95 9.5 96 5.0 97 4.5 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 981524.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.4440512844848 #Duplication Level Percentage of deduplicated Percentage of total 1 77.88615638459856 21.375116701703266 2 9.499379841883771 5.214029351029186 3 3.436710578168915 2.829517840715974 4 1.5467275705518964 1.697938830774113 5 0.870126092215625 1.193989254936698 6 0.5654593579170756 0.9311097370780841 7 0.39095307843373117 0.7510535434053768 8 0.2919268219869408 0.6409323739141015 9 0.22613477427838452 0.5585448908251242 >10 3.5209614354235654 24.793324643999355 >50 1.517955126277523 29.294269348500606 >100 0.24190072969301696 8.731938736883283 >500 0.003738805713956984 0.7434973923320358 >1k 0.001869402856978492 1.2447373539028328 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCT 4703 0.4791528276435421 No Hit AATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT 2224 0.22658641052078196 No Hit AATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCC 1871 0.19062193079333772 No Hit AATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGT 1745 0.17778475106059557 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1588 0.16178921758408352 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0188237883128685E-4 0.0 0.0 0.6373761619685305 0.0 2 1.0188237883128685E-4 0.0 0.0 0.8280999751406996 0.0 3 1.0188237883128685E-4 0.0 0.0 1.087186864508662 0.0 4 1.0188237883128685E-4 0.0 0.0 2.3808893109083424 0.0 5 1.0188237883128685E-4 0.0 0.0 2.540233351400475 0.0 6 1.0188237883128685E-4 0.0 0.0 3.536744898749292 0.0 7 1.0188237883128685E-4 0.0 0.0 4.306771917956158 0.0 8 1.0188237883128685E-4 0.0 0.0 4.779098626218004 0.0 9 1.0188237883128685E-4 0.0 0.0 5.711322392524279 0.0 10 1.0188237883128685E-4 0.0 0.0 6.832639853941422 0.0 11 1.0188237883128685E-4 0.0 0.0 8.230058561991353 0.0 12 1.0188237883128685E-4 0.0 0.0 8.83625871603751 0.0 13 2.037647576625737E-4 0.0 0.0 9.0905571336004 0.0 14 2.037647576625737E-4 0.0 0.0 9.403641683748946 0.0 15 2.037647576625737E-4 0.0 0.0 9.620753033038417 0.0 16 2.037647576625737E-4 0.0 0.0 10.043157375672934 0.0 17 2.037647576625737E-4 0.0 0.0 10.527098675121545 0.0 18 2.037647576625737E-4 0.0 0.0 11.079708697902445 0.0 19 2.037647576625737E-4 0.0 0.0 11.390246188580209 0.0 20 2.037647576625737E-4 0.0 0.0 11.698032855029526 0.0 21 2.037647576625737E-4 0.0 0.0 12.077239069039575 0.0 22 2.037647576625737E-4 0.0 0.0 12.449822928425592 0.0 23 2.037647576625737E-4 0.0 0.0 12.823833141115244 0.0 24 2.037647576625737E-4 0.0 0.0 13.121431569681434 0.0 25 2.037647576625737E-4 0.0 0.0 13.36503233746704 0.0 26 2.037647576625737E-4 0.0 0.0 13.597833573096532 0.0 27 2.037647576625737E-4 0.0 0.0 13.826050101678614 0.0 28 2.037647576625737E-4 0.0 0.0 14.054062865503035 0.0 29 2.037647576625737E-4 0.0 0.0 14.294912809060197 0.0 30 2.037647576625737E-4 0.0 0.0 14.604635240707308 0.0 31 2.037647576625737E-4 0.0 0.0 14.8573035402089 0.0 32 2.037647576625737E-4 0.0 0.0 15.109156780679841 0.0 33 2.037647576625737E-4 0.0 0.0 15.372624612337548 0.0 34 2.037647576625737E-4 0.0 0.0 15.636499973510581 0.0 35 2.037647576625737E-4 0.0 0.0 15.905061924109853 0.0 36 2.037647576625737E-4 0.0 0.0 16.176170934179908 0.0 37 2.037647576625737E-4 0.0 0.0 16.43199758742527 0.0 38 3.056471364938606E-4 0.0 0.0 16.701476479434024 0.0 39 3.056471364938606E-4 0.0 0.0 16.985830198752144 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACGT 20 7.032782E-4 45.000004 31 CGAACTA 20 7.032782E-4 45.000004 13 ATCTACG 20 7.032782E-4 45.000004 1 CAACGAC 20 7.032782E-4 45.000004 10 ACGCAAC 20 7.032782E-4 45.000004 26 CGATTAT 20 7.032782E-4 45.000004 28 TAACGCA 20 7.032782E-4 45.000004 24 TCGATAG 20 7.032782E-4 45.000004 1 GTAATCG 20 7.032782E-4 45.000004 1 ATATACG 20 7.032782E-4 45.000004 1 ATGCGTC 20 7.032782E-4 45.000004 37 ATGCGAA 20 7.032782E-4 45.000004 12 CGCAACA 20 7.032782E-4 45.000004 27 CGATACG 20 7.032782E-4 45.000004 1 CTCGTTA 55 1.8189894E-12 45.0 14 CGTTATG 45 3.8380676E-10 45.0 1 GTTACGG 95 0.0 45.0 2 TCTCGAC 35 1.2116834E-7 45.0 24 GATATCG 25 3.8903887E-5 45.0 36 CGTACTA 25 3.8903887E-5 45.0 34 >>END_MODULE