##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552895_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 305334 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.93324032043598 31.0 31.0 33.0 28.0 34.0 2 31.216490793688223 31.0 31.0 34.0 28.0 34.0 3 31.440376767736314 31.0 31.0 34.0 30.0 34.0 4 35.41109408058061 37.0 35.0 37.0 33.0 37.0 5 34.68734238571532 35.0 35.0 37.0 32.0 37.0 6 34.78771443730472 35.0 35.0 37.0 32.0 37.0 7 34.600152619754105 35.0 35.0 37.0 31.0 37.0 8 35.11140587029286 36.0 35.0 37.0 32.0 37.0 9 36.6030347095312 38.0 35.0 39.0 32.0 39.0 10 36.106833827873736 37.0 35.0 39.0 31.0 39.0 11 36.289067054438746 37.0 35.0 39.0 32.0 39.0 12 35.77674284553964 37.0 35.0 39.0 31.0 39.0 13 35.20151375215338 37.0 34.0 39.0 30.0 39.0 14 36.17597450660588 38.0 35.0 40.0 30.0 41.0 15 36.34844465405097 38.0 35.0 40.0 31.0 41.0 16 36.271738489653956 38.0 35.0 40.0 31.0 41.0 17 36.18234458003367 38.0 35.0 40.0 31.0 41.0 18 36.044407108281426 38.0 35.0 40.0 30.0 41.0 19 36.01393228399065 38.0 34.0 40.0 30.0 41.0 20 35.91118905853917 37.0 34.0 40.0 30.0 41.0 21 36.02360366025402 38.0 34.0 40.0 30.0 41.0 22 35.96855902061349 38.0 34.0 40.0 30.0 41.0 23 35.87426228327013 38.0 34.0 40.0 30.0 41.0 24 35.3816083370997 37.0 34.0 40.0 27.0 41.0 25 35.629173298748256 37.0 34.0 40.0 29.0 41.0 26 35.49927620245371 37.0 34.0 40.0 29.0 41.0 27 35.356167344612786 37.0 34.0 40.0 27.0 41.0 28 35.4552424558025 37.0 34.0 40.0 29.0 41.0 29 35.01259604236672 37.0 34.0 40.0 27.0 41.0 30 35.05512979229303 37.0 34.0 40.0 27.0 41.0 31 34.909007840594235 37.0 34.0 40.0 26.0 41.0 32 34.74781386940203 37.0 33.0 40.0 25.0 41.0 33 34.761559472577574 37.0 33.0 40.0 25.0 41.0 34 34.70251920847334 37.0 34.0 40.0 25.0 41.0 35 34.502286021209564 37.0 33.0 40.0 24.0 41.0 36 34.57310355217565 37.0 33.0 40.0 25.0 41.0 37 34.36244899028605 37.0 33.0 40.0 24.0 41.0 38 34.23965559027164 37.0 33.0 40.0 24.0 41.0 39 34.23808681640433 37.0 33.0 40.0 23.0 41.0 40 33.91965847236141 36.0 33.0 40.0 23.0 41.0 41 34.050976962932396 36.0 33.0 40.0 23.0 41.0 42 33.91804384706584 36.0 33.0 40.0 23.0 41.0 43 33.94263003792568 36.0 33.0 40.0 23.0 41.0 44 33.82229296442584 36.0 33.0 39.0 23.0 41.0 45 33.62249864083266 35.0 33.0 39.0 23.0 40.0 46 33.61680978862491 35.0 33.0 39.0 23.0 40.0 47 33.500835151014954 35.0 33.0 39.0 22.0 40.0 48 33.547495529485744 35.0 33.0 39.0 22.0 40.0 49 33.41184407894306 35.0 33.0 39.0 22.0 40.0 50 33.32157571708359 35.0 32.0 39.0 21.0 40.0 51 32.07074875382368 35.0 31.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 1.0 11 10.0 12 11.0 13 11.0 14 26.0 15 54.0 16 92.0 17 195.0 18 406.0 19 812.0 20 1320.0 21 2111.0 22 2736.0 23 3071.0 24 3420.0 25 3568.0 26 3905.0 27 4451.0 28 5255.0 29 6668.0 30 8528.0 31 11237.0 32 15200.0 33 21464.0 34 33883.0 35 34203.0 36 33108.0 37 41854.0 38 44949.0 39 22779.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.77714240798601 37.870004650644866 18.08937098390615 25.263481957462975 2 20.278449173691758 38.77589786921863 19.041770651155783 21.90388230593383 3 19.717751707965704 33.14370492640846 23.39012360235021 23.748419763275628 4 21.811524428985962 33.21575717083587 19.05192346741601 25.920794932762153 5 16.001493446520858 39.11945607105661 19.46294877085421 25.416101711568317 6 19.12004558942011 37.13408922687942 23.433682459208605 20.31218272449187 7 67.58598780352007 15.284246104266147 9.879017731402334 7.250748360811439 8 70.11141897070094 10.58414719618516 7.8409217447123485 11.463512088401554 9 67.29777882581043 12.653684162261655 13.31525477018609 6.733282241741831 10 39.81934537260835 28.262165366451164 14.33970668186314 17.578782579077338 11 31.887703301957853 26.29579411398665 23.746782212265913 18.06972037178958 12 30.67329547315399 24.235427433564556 28.438365855096386 16.65291123818507 13 22.023423529642947 36.79020351483949 21.862288510287094 19.32408444523047 14 14.187741948161687 37.57000530566527 30.003537110180982 18.23871563599206 15 12.909797140180917 31.696764854225208 33.15811537529394 22.235322630299933 16 14.934465208591247 28.522208466793742 33.88387798279916 22.659448341815846 17 13.333595341494888 29.17984895229486 28.03520079650481 29.451354909705437 18 17.635769354215384 29.331486175794375 25.804856321274407 27.227888148715834 19 19.90050240064978 34.02470736963457 27.071993292591063 19.002796937124593 20 23.745144661256198 32.238794238440526 23.475603765057283 20.540457335245993 21 17.78642404710907 33.0759103146063 25.249726528981377 23.887939109303254 22 17.466774090012905 31.822528771771243 25.07745616275947 25.633240975456385 23 19.868078890657443 31.85593481236941 21.00028165877367 27.27570463819948 24 15.848873692415518 33.70309235132674 26.855509049106878 23.592524907150857 25 16.932604950644212 28.883452219536636 26.86598937556905 27.317953454250098 26 20.656395946733742 35.10221593402634 21.594057654895952 22.647330464343966 27 15.334682675365338 32.947198805242785 25.030294693679707 26.68782382571217 28 18.386095226866317 27.918607164613178 29.031486830814778 24.663810777705724 29 19.82976019703014 30.11489057884153 28.090877530835083 21.964471693293248 30 18.382492614644946 29.641310826832257 25.147215835773284 26.828980722749513 31 25.25136407999109 29.777882581042398 22.1914362632396 22.779317075726908 32 23.69274302894535 27.965113613289056 23.281390215305205 25.060753142460392 33 22.403007853694643 27.13291019015242 25.919812402156328 24.544269553996607 34 18.699850000327512 26.712714601059822 24.94481453097264 29.64262086764003 35 18.40771090019454 28.835963240254937 26.95212455868 25.80420130087052 36 23.960973884336497 24.26752343335495 30.102445191167703 21.66905749114085 37 18.867207713520276 30.039890742596633 25.791428402994754 25.301473140888337 38 20.237837908650853 28.11052814295165 30.299606332737266 21.352027615660226 39 19.283473180189564 25.43673485429071 31.331263468857056 23.94852849666267 40 22.565780424060208 27.372320147772605 24.746998368999197 25.314901059167994 41 17.982275147870855 23.231936174811846 30.544583963790473 28.241204713526823 42 24.74274073637394 26.16282497199788 23.180517073106827 25.91391721852136 43 21.999842795103067 23.733026783784315 28.14491671415564 26.12221370695697 44 21.02255235250578 23.572546784832348 26.771338927207584 28.63356193545429 45 23.63051609057622 28.073191979930172 26.227016971578664 22.06927495791494 46 18.855089836048393 24.549837227429634 33.722087943039426 22.872984993482547 47 20.349191377311403 25.889681463577592 26.589243254927393 27.171883904183613 48 21.687398062449645 20.509016355859487 34.872303772262505 22.931281809428363 49 21.799079041312137 21.00028165877367 30.908775308350855 26.291863991563336 50 19.36174811845389 23.220145807541908 27.44568243300779 29.972423640996414 51 18.181401350652074 23.681280171877354 32.793596520531615 25.343721956938957 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4310.0 1 3504.0 2 2698.0 3 1884.5 4 1071.0 5 1161.5 6 1252.0 7 1261.0 8 1270.0 9 1244.5 10 1219.0 11 1218.0 12 1217.0 13 1281.5 14 1346.0 15 1356.5 16 1367.0 17 1574.0 18 1781.0 19 1664.0 20 1547.0 21 1532.5 22 1518.0 23 1711.5 24 1905.0 25 1911.0 26 2092.5 27 2268.0 28 2530.0 29 2792.0 30 3051.5 31 3311.0 32 3767.0 33 4223.0 34 4632.0 35 5041.0 36 5268.5 37 5496.0 38 6272.0 39 7048.0 40 8431.5 41 9815.0 42 13764.5 43 17714.0 44 26054.0 45 34394.0 46 34500.0 47 34606.0 48 35326.5 49 36047.0 50 31810.5 51 27574.0 52 25162.0 53 22750.0 54 19713.5 55 16677.0 56 14282.5 57 11888.0 58 10758.5 59 9629.0 60 8538.5 61 7448.0 62 6489.5 63 5531.0 64 4868.0 65 4205.0 66 3771.0 67 3337.0 68 3219.0 69 3101.0 70 2562.0 71 2023.0 72 1687.5 73 1352.0 74 1273.5 75 919.0 76 643.0 77 483.0 78 323.0 79 338.0 80 353.0 81 217.5 82 82.0 83 57.5 84 33.0 85 20.0 86 7.0 87 5.0 88 3.0 89 3.0 90 3.0 91 2.5 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 305334.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.16302745857033 #Duplication Level Percentage of deduplicated Percentage of total 1 78.11182147961061 26.68536302046881 2 9.985568141092731 6.822744771871522 3 3.353553669486654 3.437026382833856 4 1.5686327287915431 2.1435697194447036 5 0.9423337526122783 1.6096486932815446 6 0.5969241967948824 1.2235642635473165 7 0.4531812310863251 1.0837429988917582 8 0.339386626152412 0.9275579702653117 9 0.2994587647322421 0.9207376202031428 >10 3.6643770422548774 29.149870690121453 >50 0.6108958729444455 13.273626189522805 >100 0.059891752249455435 3.8384527897767104 >500 0.007985566966594058 2.0948485685499585 >1k 0.005989175224945543 6.789246321221085 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCTGCT 4400 1.4410448885482783 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3741 1.2252156654679793 No Hit AATGATACGGCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCC 3632 1.1895170534562152 No Hit AATGATACCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGT 3461 1.133512808923998 No Hit AATCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCT 3387 1.1092770539802315 No Hit AAACTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCT 1288 0.4218331401023142 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 948 0.3104796714417654 No Hit AAAAACTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTT 870 0.28493387569022777 No Hit AATGACTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTT 834 0.2731435084202873 No Hit AATGATCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCT 759 0.24858024327457803 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 743 0.24334008004349336 No Hit AACTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCTG 706 0.2312222025716101 No Hit AATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGCTTTCATC 676 0.2213968965133264 No Hit CCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCTGC 607 0.19879869257927388 No Hit AAAAAACTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCT 489 0.16015248875002455 No Hit AATGATACGGCGACTGTCTCTTATACACATCTGACGCCGCTTTCATCGTAT 488 0.15982497854808178 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 395 0.12936652976740226 No Hit GGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 368 0.1205237543149469 No Hit ACCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCTG 333 0.10906089724694924 No Hit GCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTCTGC 317 0.1038207340158646 No Hit AATGCTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCTTC 314 0.10283820341003623 No Hit GAAAAACTGTCTCTTATACACATCTGACGCCGCTTTCATCGTATGCCGTCT 312 0.10218318300615065 No Hit AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 309 0.10120065240032228 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.825306058283715E-4 0.0 0.0 1.6974853766694833 0.0 2 9.825306058283715E-4 0.0 0.0 2.2303444752304036 0.0 3 9.825306058283715E-4 0.0 0.0 2.9934432457571054 0.0 4 9.825306058283715E-4 0.0 0.0 6.660247466708588 0.0 5 9.825306058283715E-4 0.0 0.0 7.163630647094657 0.0 6 9.825306058283715E-4 0.0 0.0 9.505983611389494 0.0 7 9.825306058283715E-4 0.0 0.0 11.370171680847859 0.0 8 9.825306058283715E-4 0.0 0.0 12.456523020692094 0.0 9 9.825306058283715E-4 0.0 0.0 15.057609044521737 0.0 10 9.825306058283715E-4 0.0 0.0 17.159569520590566 0.0 11 9.825306058283715E-4 0.0 0.0 20.509016355859487 0.0 12 9.825306058283715E-4 0.0 0.0 21.737834633548836 0.0 13 9.825306058283715E-4 0.0 0.0 22.255300752618442 0.0 14 9.825306058283715E-4 0.0 0.0 22.901805891253513 0.0 15 9.825306058283715E-4 0.0 0.0 23.306936011056745 0.0 16 9.825306058283715E-4 0.0 0.0 24.030078536946426 0.0 17 9.825306058283715E-4 0.0 0.0 24.85081910301506 0.0 18 9.825306058283715E-4 0.0 0.0 26.340990521854756 0.0 19 9.825306058283715E-4 0.0 0.0 26.859766681732136 0.0 20 9.825306058283715E-4 0.0 0.0 27.321883576673414 0.0 21 9.825306058283715E-4 0.0 0.0 27.83672961412748 0.0 22 9.825306058283715E-4 0.0 0.0 28.319807161993097 0.0 23 9.825306058283715E-4 0.0 0.0 28.78487164875186 0.0 24 9.825306058283715E-4 0.0 0.0 29.128102340387905 0.0 25 9.825306058283715E-4 0.0 0.0 29.428756705771384 0.0 26 9.825306058283715E-4 0.0 0.0 29.7005901733839 0.0 27 9.825306058283715E-4 0.0 0.0 29.98585155927607 0.0 28 9.825306058283715E-4 0.0 0.0 30.265545271735213 0.0 29 9.825306058283715E-4 0.0 0.0 30.573077351359494 0.0 30 9.825306058283715E-4 0.0 0.0 31.005063307722036 0.0 31 9.825306058283715E-4 0.0 0.0 31.28966967321032 0.0 32 9.825306058283715E-4 0.0 0.0 31.55462542658204 0.0 33 9.825306058283715E-4 0.0 0.0 31.83300909823341 0.0 34 9.825306058283715E-4 0.0 0.0 32.103532525038155 0.0 35 9.825306058283715E-4 0.0 0.0 32.43366280859649 0.0 36 9.825306058283715E-4 0.0 0.0 32.66422999076421 0.0 37 0.001310040807771162 0.0 0.0 32.899709825961075 0.0 38 0.001310040807771162 0.0 0.0 33.169578232361935 0.0 39 0.001310040807771162 0.0 0.0 33.46368239370656 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTGAGC 20 7.025139E-4 45.000004 4 ATGGGAC 80 0.0 45.000004 5 AGGTAAT 20 7.025139E-4 45.000004 6 ATTAGTT 20 7.025139E-4 45.000004 29 CAAGTCT 20 7.025139E-4 45.000004 39 CGAAATC 20 7.025139E-4 45.000004 22 GGATGTT 20 7.025139E-4 45.000004 8 ACGCATG 20 7.025139E-4 45.000004 1 TAGACGA 20 7.025139E-4 45.000004 17 TTTCGCG 20 7.025139E-4 45.000004 1 TGGCGAT 20 7.025139E-4 45.000004 29 ACCGAAC 20 7.025139E-4 45.000004 10 CAATTCG 20 7.025139E-4 45.000004 41 ACGATCT 20 7.025139E-4 45.000004 20 CTAACGG 20 7.025139E-4 45.000004 2 CTAGTCA 20 7.025139E-4 45.000004 31 CGTAGTG 20 7.025139E-4 45.000004 28 TTCCACG 20 7.025139E-4 45.000004 1 GTGTCTA 20 7.025139E-4 45.000004 34 TCAGACA 20 7.025139E-4 45.000004 24 >>END_MODULE