##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552765_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1095313 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.76620472869399 31.0 31.0 34.0 30.0 34.0 2 31.943202536626515 33.0 31.0 34.0 30.0 34.0 3 31.982082747123425 33.0 31.0 34.0 30.0 34.0 4 35.58753251353723 37.0 35.0 37.0 33.0 37.0 5 35.458551117351846 37.0 35.0 37.0 33.0 37.0 6 35.435330357623805 37.0 35.0 37.0 33.0 37.0 7 35.78488979862377 37.0 35.0 37.0 35.0 37.0 8 35.76133123591156 37.0 35.0 37.0 35.0 37.0 9 37.34299419435358 39.0 37.0 39.0 35.0 39.0 10 36.77380620881885 39.0 37.0 39.0 32.0 39.0 11 36.627199713689144 39.0 35.0 39.0 32.0 39.0 12 36.46407921753873 38.0 35.0 39.0 32.0 39.0 13 36.39459679561915 38.0 35.0 39.0 32.0 39.0 14 37.44982758353092 39.0 36.0 41.0 32.0 41.0 15 37.54375781169401 39.0 36.0 41.0 32.0 41.0 16 37.616050389249466 39.0 36.0 41.0 33.0 41.0 17 37.609137296827484 39.0 36.0 41.0 33.0 41.0 18 37.56458656110171 39.0 36.0 41.0 33.0 41.0 19 37.53640009750637 39.0 36.0 41.0 32.0 41.0 20 37.47454471918073 39.0 36.0 41.0 32.0 41.0 21 37.410793992219574 39.0 36.0 41.0 32.0 41.0 22 37.34310466505921 39.0 35.0 41.0 32.0 41.0 23 37.29983027682498 39.0 35.0 41.0 32.0 41.0 24 37.27590743467849 39.0 35.0 41.0 32.0 41.0 25 37.218655306747934 39.0 35.0 41.0 32.0 41.0 26 37.117391101904204 39.0 35.0 41.0 31.0 41.0 27 37.04776169003746 39.0 35.0 41.0 31.0 41.0 28 36.94301446253263 39.0 35.0 41.0 31.0 41.0 29 36.92553817949755 39.0 35.0 41.0 31.0 41.0 30 36.85039710110261 39.0 35.0 40.0 31.0 41.0 31 36.7247599544605 39.0 35.0 40.0 31.0 41.0 32 36.62691942851039 39.0 35.0 40.0 30.0 41.0 33 36.531170542119014 39.0 35.0 40.0 30.0 41.0 34 36.41973298956554 39.0 35.0 40.0 30.0 41.0 35 36.39117129076346 39.0 35.0 40.0 30.0 41.0 36 36.2974181809218 38.0 35.0 40.0 30.0 41.0 37 36.219240527593485 38.0 35.0 40.0 30.0 41.0 38 36.15913624689929 38.0 35.0 40.0 30.0 41.0 39 36.13888450150779 38.0 35.0 40.0 30.0 41.0 40 36.034857616042174 38.0 35.0 40.0 29.0 41.0 41 35.9128924791361 38.0 35.0 40.0 29.0 41.0 42 35.803542001236174 38.0 34.0 40.0 29.0 41.0 43 35.71353667855672 38.0 34.0 40.0 29.0 41.0 44 35.62877460598021 38.0 34.0 40.0 28.0 41.0 45 35.5747681256408 38.0 34.0 40.0 28.0 41.0 46 35.45502061967675 38.0 34.0 40.0 28.0 41.0 47 35.32356687083966 38.0 34.0 40.0 27.0 41.0 48 35.251820255945105 37.0 34.0 40.0 27.0 41.0 49 35.1860061918374 37.0 34.0 40.0 27.0 41.0 50 35.086361615355614 37.0 34.0 40.0 27.0 41.0 51 33.541084603213875 36.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 9.0 12 5.0 13 18.0 14 26.0 15 62.0 16 111.0 17 223.0 18 439.0 19 784.0 20 1258.0 21 2011.0 22 2938.0 23 4150.0 24 5680.0 25 7463.0 26 9577.0 27 12028.0 28 15176.0 29 19230.0 30 24128.0 31 30853.0 32 39419.0 33 52811.0 34 82308.0 35 95445.0 36 97918.0 37 138231.0 38 210839.0 39 242127.0 40 40.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.212226094276254 20.775705209378508 26.148598619755266 10.863470076589978 2 31.255084163157015 24.681255495004624 25.584011145672513 18.479649196165845 3 31.664738755040794 24.317797743658662 26.951200250521996 17.066263250778544 4 28.71599259754974 26.25130898656366 26.021602957328177 19.011095458558422 5 25.66070155288945 30.289424118950475 24.47574346328401 19.574130864876068 6 26.857710992200403 36.15980089709517 22.378808614523884 14.603679496180543 7 81.87495263910863 6.273366608448909 7.198672890762732 4.653007861679721 8 83.26524016422702 4.989441374292097 6.676630333064612 5.068688128416261 9 77.38244684396149 7.077429008876915 9.269313885619908 6.270810261541677 10 41.809053667764374 25.31879015404729 16.67961578105984 16.19254039712849 11 30.79265926725968 26.822652520329804 22.463076764358682 19.921611448051834 12 27.86618984710307 23.504970725263007 29.39552438435406 19.233315043279866 13 24.769449463304095 25.32152909716218 29.65079388266185 20.258227556871873 14 20.660578300449277 28.216409373393724 28.14811839172912 22.974893934427875 15 20.112515783159697 26.17416208882758 32.23845603950652 21.474866088506207 16 21.80107421348966 25.10926100575817 30.256739397779448 22.83292538297272 17 22.587972570397685 25.315229527997936 27.27658669257098 24.8202112090334 18 23.31415768825897 24.959623413581323 29.218953851547457 22.507265046612247 19 23.877010498368957 26.662241751901057 26.912398556394386 22.548349193335604 20 25.72351464832427 25.82047323459139 26.978133191151755 21.477878925932586 21 24.57388892490092 26.79836722471111 26.999588245551724 21.628155604836245 22 22.577473288457274 25.37977728740552 26.13937751126847 25.90337191286874 23 22.30558753525248 26.799371503853237 26.406424464970286 24.488616495923996 24 22.945678541202376 25.016684728474875 27.91585601558641 24.121780714736335 25 22.11997849016674 26.46202501020256 26.424501489528563 24.993495010102134 26 22.068486359606798 26.778555536180072 26.321152035993368 24.83180606821977 27 23.67359832303643 26.610019236510478 26.80466679387536 22.911715646577736 28 20.125114921488198 26.479097755618714 28.39526235879607 25.00052496409702 29 22.20835505467387 24.87745512013461 26.66434160828914 26.249848216902382 30 23.864502658144293 24.767532203123675 25.922635812776807 25.44532932595523 31 23.48990653813111 27.040763690378917 24.86932958889377 24.600000182596208 32 23.044006599026943 27.93740236809022 24.06088487948194 24.9577061534009 33 23.57271391830463 26.59057274039475 24.139218652567802 25.697494688732807 34 20.30396790689054 25.750447588954025 27.895770432743884 26.049814071411554 35 22.600023920103204 24.790721921496413 25.435560428845456 27.17369372955493 36 23.266500078059877 28.456158194050467 24.671943088413997 23.605398639475656 37 22.450477626030185 27.582891830919564 28.432420687054748 21.5342098559955 38 21.29692608414216 28.325328011262535 25.52238492558748 24.855360979007827 39 22.131755945560766 25.246573353918013 26.85058974010169 25.771080960419535 40 22.382277942469415 24.922099892907323 28.479074018111717 24.216548146511546 41 20.16656426062687 26.75682658746861 26.752626874692442 26.32398227721208 42 21.70612418550679 26.570761051863713 26.35648440217545 25.366630360454046 43 23.207430204882073 24.529791940751185 27.426132986644003 24.836644867722743 44 21.82061200770921 23.84806899945495 27.318675118436463 27.012643874399373 45 22.387299338180043 22.96165570937257 26.47078962817021 28.18025532427717 46 22.236292274445752 24.845318187586564 27.64890035998842 25.269489177979267 47 20.173685512725587 25.344536219327264 29.790114789105942 24.691663478841207 48 20.015100706373428 24.888502190698 28.69590701470721 26.400490088221357 49 21.387219908829714 24.321084475396532 29.578211890117256 24.713483725656502 50 20.53340004181453 23.614711046066283 29.167918211506667 26.68397070061252 51 20.030986576439794 23.858568281395364 27.117454097595843 28.992991044568996 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 448.0 1 703.0 2 958.0 3 1316.0 4 1674.0 5 1325.5 6 977.0 7 985.0 8 993.0 9 1064.0 10 1135.0 11 1282.5 12 1430.0 13 1555.0 14 1680.0 15 1790.0 16 1900.0 17 1887.0 18 1874.0 19 2151.5 20 2429.0 21 2641.0 22 2853.0 23 3184.0 24 3515.0 25 4842.0 26 7399.5 27 8630.0 28 10151.0 29 11672.0 30 14150.0 31 16628.0 32 18094.0 33 19560.0 34 22371.5 35 25183.0 36 28537.0 37 31891.0 38 33628.0 39 35365.0 40 39351.0 41 43337.0 42 49685.5 43 56034.0 44 62740.5 45 69447.0 46 79513.5 47 89580.0 48 102675.5 49 115771.0 50 113771.5 51 111772.0 52 97312.0 53 82852.0 54 73866.0 55 64880.0 56 60852.5 57 56825.0 58 54363.5 59 51902.0 60 49183.5 61 46465.0 62 43055.0 63 39645.0 64 33894.0 65 28143.0 66 24243.5 67 20344.0 68 17109.0 69 13874.0 70 12123.0 71 10372.0 72 8262.0 73 6152.0 74 5305.5 75 3720.0 76 2981.0 77 2388.0 78 1795.0 79 1381.0 80 967.0 81 734.0 82 501.0 83 300.0 84 99.0 85 88.5 86 78.0 87 50.5 88 23.0 89 13.5 90 4.0 91 6.5 92 9.0 93 17.0 94 25.0 95 18.0 96 11.0 97 6.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1095313.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.130176700978915 #Duplication Level Percentage of deduplicated Percentage of total 1 68.7702427569631 15.906678667377715 2 12.547517161576675 5.804525782116677 3 5.165729884257169 3.58452735037187 4 2.6292435042564035 2.432594673734065 5 1.512841657114675 1.7496147424832094 6 0.9988737759085086 1.386247616324269 7 0.6713871718938094 1.087051274447202 8 0.48513513547072645 0.8977009125832998 9 0.3563036036078477 0.7417228779580559 >10 4.805805837063013 29.778869811650466 >50 1.9377179787732044 29.711112652799244 >100 0.11088514708355855 4.350163804519118 >500 0.004752220589295355 0.744705980727725 >1k 0.003564165441971517 1.8244838529071126 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 4204 0.3838172284999813 No Hit CCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 3435 0.3136089866549562 No Hit CTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGCT 3342 0.30511826299879574 No Hit TCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 2166 0.19775169289509026 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 2126 0.194099768741903 No Hit ACTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 1414 0.12909551881516973 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1136 0.10371464595051824 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8259620765936313E-4 0.0 0.0 0.32228230651877593 0.0 2 1.8259620765936313E-4 0.0 0.0 1.4074515686383708 0.0 3 1.8259620765936313E-4 0.0 0.0 1.94099768741903 0.0 4 1.8259620765936313E-4 0.0 0.0 2.526948917797926 0.0 5 1.8259620765936313E-4 0.0 0.0 3.967450400022642 0.0 6 1.8259620765936313E-4 0.0 0.0 4.739010675487281 0.0 7 1.8259620765936313E-4 0.0 0.0 5.574114431217378 0.0 8 1.8259620765936313E-4 0.0 0.0 6.85219658672909 0.0 9 1.8259620765936313E-4 0.0 0.0 7.291523062357518 0.0 10 1.8259620765936313E-4 0.0 0.0 8.437862054043 0.0 11 1.8259620765936313E-4 0.0 0.0 10.198272092086919 0.0 12 1.8259620765936313E-4 0.0 0.0 11.483110307282027 0.0 13 2.738943114890447E-4 0.0 0.0 11.970824777940187 0.0 14 2.738943114890447E-4 0.0 0.0 12.152599302665083 0.0 15 2.738943114890447E-4 0.0 0.0 12.512861620377006 0.0 16 2.738943114890447E-4 0.0 0.0 13.353443262336885 0.0 17 2.738943114890447E-4 0.0 0.0 14.360917838097421 0.0 18 2.738943114890447E-4 0.0 0.0 15.478224032765063 0.0 19 2.738943114890447E-4 0.0 0.0 16.102611764856256 0.0 20 2.738943114890447E-4 0.0 0.0 16.684180686251327 0.0 21 4.564905191484078E-4 0.0 0.0 17.436568359911732 0.0 22 0.0010955772459561787 0.0 0.0 18.201189979485317 0.0 23 0.0010955772459561787 0.0 0.0 18.935957119106593 0.0 24 0.001460769661274905 0.0 0.0 19.532955420048882 0.0 25 0.0020085582842529945 0.0 0.0 20.069057885736772 0.0 26 0.0020085582842529945 0.0 0.0 20.53075239680347 0.0 27 0.0021911544919123575 0.0 0.0 20.99335988890847 0.0 28 0.002556346907231084 0.0 0.0 21.458249833609205 0.0 29 0.002556346907231084 0.0 0.0 21.958746038803522 0.0 30 0.002556346907231084 0.0 0.0 22.530911255504133 0.0 31 0.002556346907231084 0.0 0.0 23.05998376719714 0.0 32 0.002556346907231084 0.0 0.0 23.572257427785484 0.0 33 0.002556346907231084 0.0 0.0 24.050842088060673 0.0 34 0.003286731737868536 0.0 0.0 24.547138580478823 0.0 35 0.003286731737868536 0.0 0.0 25.071828783188003 0.0 36 0.003286731737868536 0.0 0.0 25.578715855650394 0.0 37 0.003286731737868536 0.0 0.0 26.0502705619307 0.0 38 0.003286731737868536 0.0 0.0 26.526298875298657 0.0 39 0.003286731737868536 0.0 0.0 27.042772248663166 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAG 20 7.03314E-4 45.000004 1 ACGCATT 30 2.1654068E-6 45.000004 17 CGTGCAA 20 7.03314E-4 45.000004 45 CGACAGT 25 3.8906845E-5 45.000004 16 TCTAGCG 30 2.1654068E-6 45.000004 1 GCCGATA 50 2.1827873E-11 45.000004 9 TGCGACG 40 6.8139343E-9 45.000004 1 ATGACCG 20 7.03314E-4 45.000004 38 ACGCTAA 25 3.8906845E-5 45.000004 39 CCGCGTA 20 7.03314E-4 45.000004 33 CACGTAT 30 2.1654068E-6 45.000004 30 CGCCCAT 20 7.03314E-4 45.000004 24 CGGACTA 25 3.8906845E-5 45.000004 26 AGTAACG 55 1.8189894E-12 45.0 1 TAGCCCG 70 0.0 41.785717 1 AAGGGCG 355 0.0 40.56338 5 TATCCGT 45 1.9281288E-8 40.0 27 CGTAAGG 210 0.0 39.642857 2 CGACCAA 80 0.0 39.375004 29 CGTGTAC 335 0.0 38.955223 18 >>END_MODULE