##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552755_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 390722 Sequences flagged as poor quality 0 Sequence length 51 %GC 26 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.487218533893664 31.0 31.0 34.0 30.0 34.0 2 31.73455551517447 31.0 31.0 34.0 30.0 34.0 3 31.629219752151148 31.0 31.0 34.0 30.0 34.0 4 35.43218963866892 37.0 35.0 37.0 33.0 37.0 5 35.321028762137786 37.0 35.0 37.0 33.0 37.0 6 35.28374905943356 37.0 35.0 37.0 32.0 37.0 7 35.08651931552357 37.0 35.0 37.0 32.0 37.0 8 34.83095141814385 37.0 35.0 37.0 31.0 37.0 9 36.26355311449061 38.0 35.0 39.0 32.0 39.0 10 36.808068140519346 39.0 37.0 39.0 32.0 39.0 11 36.77941605540512 39.0 37.0 39.0 32.0 39.0 12 36.77339387083399 39.0 37.0 39.0 32.0 39.0 13 36.70832714820256 39.0 37.0 39.0 32.0 39.0 14 37.810113072721784 40.0 37.0 41.0 32.0 41.0 15 37.66367391649305 40.0 37.0 41.0 32.0 41.0 16 37.699052011404525 40.0 37.0 41.0 32.0 41.0 17 37.17637092357226 39.0 36.0 40.0 32.0 41.0 18 36.40589216885663 37.0 36.0 39.0 31.0 41.0 19 35.62099651414561 35.0 34.0 39.0 31.0 41.0 20 35.294053060743956 35.0 34.0 39.0 30.0 41.0 21 35.23193984469776 35.0 33.0 39.0 30.0 41.0 22 35.18064506221815 35.0 33.0 39.0 30.0 41.0 23 34.793868786502934 35.0 33.0 39.0 28.0 41.0 24 34.64780329748517 35.0 33.0 39.0 27.0 41.0 25 34.60148903824202 35.0 33.0 39.0 27.0 41.0 26 34.579051090033325 35.0 33.0 39.0 27.0 41.0 27 34.50228295309709 35.0 33.0 39.0 25.0 41.0 28 34.37058317678554 35.0 33.0 39.0 25.0 41.0 29 34.33548661196452 35.0 33.0 39.0 25.0 41.0 30 34.1216773050916 35.0 33.0 39.0 24.0 41.0 31 33.94308485316926 35.0 33.0 39.0 24.0 41.0 32 33.69323201662563 35.0 33.0 39.0 22.0 41.0 33 33.36579972461239 35.0 33.0 39.0 21.0 41.0 34 33.144215068514185 35.0 33.0 39.0 21.0 40.0 35 33.00279482598881 35.0 33.0 39.0 20.0 40.0 36 32.7912607941196 35.0 33.0 39.0 20.0 40.0 37 32.6823982268723 35.0 33.0 39.0 18.0 40.0 38 32.4880324117915 35.0 33.0 39.0 17.0 40.0 39 32.293390185349175 35.0 33.0 38.0 15.0 40.0 40 31.918599413393665 35.0 31.0 38.0 15.0 40.0 41 31.646843535813186 35.0 31.0 38.0 13.0 40.0 42 31.486604286423596 35.0 31.0 38.0 12.0 40.0 43 31.3123013293339 35.0 31.0 38.0 10.0 40.0 44 31.105558427731225 35.0 30.0 38.0 10.0 40.0 45 30.959480141891166 35.0 29.0 38.0 10.0 40.0 46 30.694038216430098 35.0 28.0 38.0 8.0 40.0 47 30.262557521716207 35.0 26.0 38.0 8.0 40.0 48 30.06330076115499 35.0 25.0 38.0 8.0 40.0 49 29.960918504716908 35.0 26.0 38.0 7.0 40.0 50 29.708872292832243 35.0 24.0 38.0 7.0 40.0 51 28.942649761211296 34.0 23.0 36.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 6.0 13 11.0 14 25.0 15 59.0 16 153.0 17 416.0 18 781.0 19 1566.0 20 2413.0 21 3333.0 22 4494.0 23 5816.0 24 7344.0 25 8410.0 26 9271.0 27 10055.0 28 10973.0 29 11963.0 30 13555.0 31 16072.0 32 19364.0 33 24086.0 34 33392.0 35 71611.0 36 32436.0 37 29586.0 38 41997.0 39 31529.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.755995311244316 42.45678513111624 6.034725456974524 22.752494100664922 2 25.349481216824238 63.41081382671055 5.760873459902437 5.478831496562774 3 8.100388511524818 63.38854735592058 23.86095484769222 4.650109284862383 4 8.037684082288687 50.45710249230911 35.95804689779434 5.547166527607864 5 15.583970188522786 48.58748675528893 23.790060452188513 12.038482603999775 6 7.091742978383609 56.68966682193478 27.525964752432674 8.69262544724894 7 21.79580366603365 41.206279656635665 30.555996334990095 6.44192034234059 8 19.26024129688116 48.303397300382365 25.318768843320825 7.117592559415646 9 17.483018616817073 40.429768479891074 23.951812285973148 18.13540061731871 10 15.184197460086713 44.54957744892788 27.571009566904348 12.69521552408106 11 11.720609538239463 45.32890392657695 26.860785929637952 16.08970060554563 12 8.769406381007467 45.05454005661314 30.413951607536816 15.762101954842572 13 8.632992255363147 46.63545948270126 35.55494699556206 9.176601266373535 14 7.269874744703395 54.76860785929638 25.79916155220336 12.162355843796869 15 4.360645164592728 51.22030497386889 33.34954264157125 11.069507219967138 16 4.21578513623497 55.272034848306475 23.966912536278993 16.54526747917957 17 4.531866646874248 54.30075603626108 25.65327777806215 15.514099538802526 18 4.257758713356299 55.31247280675262 24.329830416510973 16.0999380633801 19 4.334539647114828 55.37927221912254 21.93119404589452 18.3549940878681 20 5.957944523215995 56.105875788924095 25.5793121452081 12.356867542651809 21 7.156750835632495 58.23936200162776 24.27429220775897 10.329594954980779 22 5.3334595953132915 51.457302122736884 24.270709097516903 18.938529184432923 23 7.015217981070941 54.35424675344619 24.585766862372736 14.044768403110139 24 12.88384068468118 49.33789241455562 20.869057795568207 16.909209105194996 25 10.458586923695108 58.162581067869226 17.841585577469402 13.537246430966263 26 10.823808231939845 50.378018130537825 20.376380137284308 18.42179350023802 27 14.610132012018775 50.10007115033195 18.201688156796905 17.088108680852372 28 10.557890264689473 47.19851966359714 23.878870398902542 18.364719672810846 29 17.690839010856823 45.57844196129217 19.771602315712965 16.95911671213804 30 12.431345048397583 50.712783001725015 20.491551537922103 16.3643204119553 31 11.808395739170049 48.17850031480183 22.8128951018883 17.200208844139823 32 11.01345713832341 50.75424470595462 24.57169035785034 13.660607797871632 33 7.783539191547955 53.37477797513321 21.654014875026235 17.187667958292597 34 11.932780851858867 54.76400100327087 20.94225561908467 12.360962525785597 35 8.441039920966825 50.77446368517769 18.35064316828845 22.433853225567027 36 10.817665757239164 53.68778824842215 20.43447771049493 15.060068283843755 37 7.3167111142960986 48.92865003762266 28.591172240109337 15.163466607971909 38 8.03384503560076 50.035319229528916 25.347689661703203 16.58314607316711 39 14.183741893213078 49.290288235625326 24.401492621352265 12.124477249809328 40 11.896437876546496 47.09844851326518 25.5759849714119 15.429128638776419 41 10.56352086649843 52.78279697585495 22.029985513997165 14.62369664364945 42 10.74344418793925 44.69955620620288 29.27529035989783 15.281709245960043 43 16.0879090504246 44.50222920644345 24.94023883989128 14.469622903240667 44 14.870931250351912 40.08527802376114 25.094568516745923 19.949222209141027 45 13.102666345892988 37.37695855365196 24.98835489171329 24.532020208741763 46 18.771658621731053 40.36757592354667 24.50924186506007 16.351523589662214 47 11.279119169127922 38.716273974846565 34.070771546009695 15.933835310015818 48 12.754848715966851 39.698046181172295 27.15536877882484 20.391736324036017 49 11.746970992163225 35.364018406949185 34.281919113845646 18.607091487041938 50 12.329994215836324 35.356340313573334 32.18835898669642 20.12530648389392 51 11.495385465881112 34.58929878532563 28.67742282236475 25.237892926428508 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 80330.0 1 52586.0 2 24842.0 3 26030.0 4 27218.0 5 17592.0 6 7966.0 7 7422.5 8 6879.0 9 6974.5 10 7070.0 11 7087.5 12 7105.0 13 6719.5 14 6334.0 15 5560.5 16 4787.0 17 4053.5 18 3320.0 19 2958.5 20 2597.0 21 2232.0 22 1867.0 23 1603.5 24 1340.0 25 1349.0 26 1380.0 27 1402.0 28 1463.5 29 1525.0 30 1699.5 31 1874.0 32 1970.5 33 2067.0 34 2336.5 35 2606.0 36 2819.5 37 3033.0 38 4259.5 39 5486.0 40 11002.5 41 16519.0 42 21791.5 43 27064.0 44 46278.0 45 65492.0 46 45872.5 47 26253.0 48 23683.5 49 21114.0 50 14476.0 51 7838.0 52 6620.5 53 5403.0 54 4549.0 55 3695.0 56 3520.5 57 3346.0 58 3086.5 59 2827.0 60 2831.0 61 2835.0 62 2549.0 63 2263.0 64 1947.0 65 1631.0 66 1332.0 67 1033.0 68 926.5 69 820.0 70 697.0 71 574.0 72 497.5 73 421.0 74 328.0 75 205.0 76 175.0 77 147.0 78 119.0 79 75.5 80 32.0 81 20.5 82 9.0 83 11.5 84 14.0 85 7.5 86 1.0 87 1.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 390722.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.30051033727305 #Duplication Level Percentage of deduplicated Percentage of total 1 82.07912042509726 18.30406273514161 2 7.778912696682083 3.4694744601020675 3 2.971319706655343 1.9878583750083179 4 1.6285448681900083 1.4526952667113702 5 1.1534091561176594 1.286080640455362 6 0.788449841047594 1.0549700298421896 7 0.658763040409489 1.0283526394725662 8 0.4728403704681349 0.8435665255603729 9 0.3752883522890294 0.7532209601711702 >10 1.8397162957777193 6.8468117996939 >50 0.10902872620017674 1.747534052344122 >100 0.09869968898121263 4.523932617052533 >500 0.005738354010535618 0.8827248017772228 >1k 0.029839440854785213 16.110431457660436 >5k 0.004590683208428494 7.002677095223714 >10k+ 0.005738354010535618 32.70560654378305 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 76343 19.53895608642462 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18600 4.760417893028803 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 11952 3.0589524009397984 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 10764 2.7548999032560233 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCG 10129 2.5923802601338033 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGC 9120 2.334140386259284 No Hit AAAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 7591 1.9428135605366474 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCC 5377 1.376170269398703 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT 5273 1.3495528790290794 No Hit GAAAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT 4363 1.1166507132948746 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT 4020 1.0288645123642897 No Hit CGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG 3936 1.0073658509119015 No Hit CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT 3710 0.9495242141471429 No Hit AAAAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT 3560 0.9111337472678784 No Hit CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 3318 0.8491971273693317 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTC 3244 0.8302578303755611 No Hit CGTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT 3222 0.8246272285666023 No Hit CGTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 3070 0.7857248887956143 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCG 2421 0.6196221354313297 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT 2419 0.6191102625396062 No Hit GAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT 2270 0.5809757321062035 No Hit GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 2195 0.5617804986665711 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2140 0.5477039941441741 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTTAACAT 2078 0.5318359345007448 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGT 1952 0.4995879423221625 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTC 1935 0.4952370227425126 No Hit ACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 1911 0.4890945480418302 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGC 1863 0.47680959864046557 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTA 1657 0.4240866907929423 No Hit GAAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 1572 0.4023320928946924 No Hit AAAAAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT 1513 0.38723184258884835 No Hit AAAAAAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTC 1243 0.3181290022061722 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT 1229 0.3145458919641074 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1082 0.2769232344224282 No Hit AAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT 1024 0.2620789205624459 No Hit GAAAAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT 985 0.25209739917383717 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC 900 0.23034280127558726 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATG 530 0.1356463163067347 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCTTAACATCGT 523 0.13385476118570236 No Hit GAAAAAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTC 511 0.1307835238353612 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA 462 0.11824263798813478 No Hit CGTTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATG 455 0.11645108286710244 No Hit TGTTTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTT 454 0.11619514642124068 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGCTTAACA 439 0.11235609973331423 No Hit AAAAAAAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGT 423 0.10826111659952602 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTAT 420 0.10749330726194072 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACC 404 0.1033983241281525 No Hit AGGGTAGGGTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCC 392 0.10032708677781134 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.559364458617636E-4 0.0 0.0 0.9886824903639928 0.0 2 2.559364458617636E-4 0.0 0.0 3.0233772349650136 0.0 3 2.559364458617636E-4 0.0 0.0 4.30433914650314 0.0 4 2.559364458617636E-4 0.0 0.0 6.239986486555659 0.0 5 2.559364458617636E-4 0.0 0.0 13.271840336607614 0.0 6 2.559364458617636E-4 0.0 0.0 17.525760003275987 0.0 7 2.559364458617636E-4 0.0 0.0 20.7927887347014 0.0 8 2.559364458617636E-4 0.0 0.0 23.217018749904025 0.0 9 2.559364458617636E-4 0.0 0.0 24.214403079427317 0.0 10 2.559364458617636E-4 0.0 0.0 28.13048663755816 0.0 11 2.559364458617636E-4 0.0 0.0 30.438009633447823 0.0 12 2.559364458617636E-4 0.0 0.0 34.14064219572995 0.0 13 2.559364458617636E-4 0.0 0.0 34.76563899652438 0.0 14 2.559364458617636E-4 0.0 0.0 35.12702125808119 0.0 15 5.118728917235272E-4 0.0 0.0 35.812163123653136 0.0 16 5.118728917235272E-4 0.0 0.0 36.24264822559262 0.0 17 5.118728917235272E-4 0.0 0.0 36.6088932796208 0.0 18 5.118728917235272E-4 0.0 0.0 36.9208798071263 0.0 19 5.118728917235272E-4 0.0 0.0 37.75728011220254 0.0 20 5.118728917235272E-4 0.0 0.0 38.051607024943564 0.0 21 5.118728917235272E-4 0.0 0.0 38.25046964337815 0.0 22 5.118728917235272E-4 0.0 0.0 38.507173898577506 0.0 23 5.118728917235272E-4 0.0 0.0 38.71678584773829 0.0 24 5.118728917235272E-4 0.0 0.0 38.89389386827463 0.0 25 5.118728917235272E-4 0.0 0.0 39.040289515307556 0.0 26 5.118728917235272E-4 0.0 0.0 39.168513674684306 0.0 27 5.118728917235272E-4 0.0 0.0 39.30390405454518 0.0 28 5.118728917235272E-4 0.0 0.0 39.43238415036778 0.0 29 5.118728917235272E-4 0.0 0.0 39.55395396215212 0.0 30 5.118728917235272E-4 0.0 0.0 39.681154375745415 0.0 31 5.118728917235272E-4 0.0 0.0 39.799908886625275 0.0 32 5.118728917235272E-4 0.0 0.0 39.92506180865168 0.0 33 5.118728917235272E-4 0.0 0.0 40.04279257374809 0.0 34 5.118728917235272E-4 0.0 0.0 40.16026740239864 0.0 35 5.118728917235272E-4 0.0 0.0 40.29463403647606 0.0 36 5.118728917235272E-4 0.0 0.0 40.40084766150869 0.0 37 5.118728917235272E-4 0.0 0.0 40.50552566786615 0.0 38 5.118728917235272E-4 0.0 0.0 40.62120894139567 0.0 39 5.118728917235272E-4 0.0 0.0 40.73689221492519 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATGA 60 0.0 45.000004 18 TAGGGTC 60 0.0 45.000004 5 CGAGATA 30 2.1618107E-6 45.000004 19 TGAGGGA 55 1.8189894E-12 45.000004 4 TCACGAA 20 7.027566E-4 45.0 6 GTTGATC 40 6.7957444E-9 45.0 16 TTGATCC 35 1.2091732E-7 45.0 17 ATCCTGC 35 1.2091732E-7 45.0 20 CGGGTTA 20 7.027566E-4 45.0 23 TCGTTGA 20 7.027566E-4 45.0 24 ACTGCTA 20 7.027566E-4 45.0 29 GGAGCAA 20 7.027566E-4 45.0 8 CATATGC 35 1.2091732E-7 45.0 33 TTAATCG 20 7.027566E-4 45.0 20 TGCCAGT 35 1.2091732E-7 45.0 24 TATGGGA 20 7.027566E-4 45.0 4 CGTTGAT 20 7.027566E-4 45.0 25 TCTTAGA 25 3.886063E-5 45.0 20 GTCTCAA 40 6.7957444E-9 45.0 42 ATTAATC 20 7.027566E-4 45.0 19 >>END_MODULE