##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552750_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 137912 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.043984569870645 33.0 33.0 33.0 33.0 33.0 2 32.13428128081675 33.0 33.0 33.0 33.0 33.0 3 32.21364348280063 33.0 33.0 33.0 33.0 33.0 4 32.194877893149254 33.0 33.0 33.0 33.0 33.0 5 32.218385637217935 33.0 33.0 33.0 33.0 33.0 6 35.7684102906201 37.0 37.0 37.0 33.0 37.0 7 36.00524247346134 37.0 37.0 37.0 37.0 37.0 8 36.086308660595165 37.0 37.0 37.0 37.0 37.0 9 35.92869365972504 37.0 37.0 37.0 37.0 37.0 10 36.10234062300597 37.0 37.0 37.0 37.0 37.0 11 36.06983438714543 37.0 37.0 37.0 37.0 37.0 12 36.030874760716976 37.0 37.0 37.0 37.0 37.0 13 36.042505365740475 37.0 37.0 37.0 37.0 37.0 14 36.06422936365218 37.0 37.0 37.0 37.0 37.0 15 36.076048494692266 37.0 37.0 37.0 37.0 37.0 16 36.0889625268287 37.0 37.0 37.0 37.0 37.0 17 36.07004466616393 37.0 37.0 37.0 37.0 37.0 18 36.069870642148615 37.0 37.0 37.0 37.0 37.0 19 36.082349614246766 37.0 37.0 37.0 37.0 37.0 20 36.04356401183363 37.0 37.0 37.0 37.0 37.0 21 35.955761645107025 37.0 37.0 37.0 37.0 37.0 22 35.98823162596438 37.0 37.0 37.0 37.0 37.0 23 36.02768432043622 37.0 37.0 37.0 37.0 37.0 24 36.005401995475374 37.0 37.0 37.0 37.0 37.0 25 36.00767880967574 37.0 37.0 37.0 37.0 37.0 26 35.97119177446488 37.0 37.0 37.0 37.0 37.0 27 35.94402227507396 37.0 37.0 37.0 37.0 37.0 28 35.91972417193573 37.0 37.0 37.0 37.0 37.0 29 35.89805818202912 37.0 37.0 37.0 37.0 37.0 30 35.851804048958755 37.0 37.0 37.0 33.0 37.0 31 35.775189976216716 37.0 37.0 37.0 33.0 37.0 32 35.648326469052726 37.0 37.0 37.0 33.0 37.0 33 35.54692122512907 37.0 37.0 37.0 33.0 37.0 34 35.409115958002204 37.0 37.0 37.0 33.0 37.0 35 35.292867915772376 37.0 37.0 37.0 33.0 37.0 36 35.25633737455769 37.0 37.0 37.0 33.0 37.0 37 35.20308602587157 37.0 37.0 37.0 33.0 37.0 38 35.11521114913858 37.0 37.0 37.0 33.0 37.0 39 35.09007918092697 37.0 37.0 37.0 33.0 37.0 40 35.05110505249724 37.0 37.0 37.0 33.0 37.0 41 35.0084909217472 37.0 37.0 37.0 33.0 37.0 42 34.960699576541565 37.0 37.0 37.0 27.0 37.0 43 34.926532861534895 37.0 37.0 37.0 27.0 37.0 44 34.83306746330994 37.0 37.0 37.0 27.0 37.0 45 34.76374789720982 37.0 37.0 37.0 27.0 37.0 46 34.75073235106445 37.0 37.0 37.0 27.0 37.0 47 34.69921399153083 37.0 37.0 37.0 27.0 37.0 48 34.65705667382099 37.0 37.0 37.0 27.0 37.0 49 34.61037473171297 37.0 37.0 37.0 27.0 37.0 50 34.55979175126168 37.0 37.0 37.0 27.0 37.0 51 34.26173211903242 37.0 37.0 37.0 27.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 73.0 15 266.0 16 199.0 17 94.0 18 71.0 19 67.0 20 78.0 21 88.0 22 129.0 23 194.0 24 319.0 25 516.0 26 828.0 27 1386.0 28 2207.0 29 2624.0 30 2758.0 31 3075.0 32 3627.0 33 4862.0 34 7404.0 35 15018.0 36 92029.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.43265270607344 25.91072568014386 19.949678055571667 17.706943558211034 2 29.623238006844943 32.62297697082197 20.92493764139451 16.82884738093857 3 26.334184117408206 31.49762167179071 28.09690237252741 14.07129183827368 4 25.0246534021695 32.1473113289634 27.499419919948952 15.32861534891815 5 20.89665873890597 33.82446777655316 26.61552294216602 18.66335054237485 6 19.765502639364232 39.56000928128082 26.260949010963515 14.413539068391437 7 61.44787980741342 15.862288995881432 16.016010209408897 6.6738209872962475 8 58.95426068797494 16.029787110621267 15.95365160392134 9.062300597482452 9 54.61671210627067 16.28212193282673 19.360896803758916 9.740269157143686 10 29.68704681246012 29.28534137711004 25.464064040837638 15.563547769592203 11 21.742125413307036 30.794274609896167 26.90483786762573 20.558762109171067 12 18.8736295608794 27.502320320204188 34.58292244329718 19.041127675619236 13 19.028800974534484 29.488369394976505 34.46328093276872 17.019548697720285 14 15.11688613028598 32.942020998897846 30.768171007599047 21.172921863217123 15 13.45278148384477 32.40762225187076 34.91139277220257 19.228203492081906 16 13.924821625384304 32.71288937873427 30.641278496432506 22.721010499448923 17 14.3693079644991 32.92534369743024 29.695748013225824 23.00960032484483 18 14.610766285747435 31.995765415627357 32.9877023029178 20.40576599570741 19 14.950113115609954 33.42711294158594 30.00391554034457 21.61885840245954 20 16.126950519171647 35.0129067811358 30.272927664017637 18.587215035674923 21 17.18632171239631 35.479146122164856 30.115580950171122 17.218951215267708 22 13.61085329775509 34.50026103602297 26.945443471199027 24.943442195022914 23 14.314200359649632 33.47279424560589 28.323133592435756 23.88987180230872 24 18.058617089158304 31.599860780787747 27.76335634317536 22.57816578687859 25 14.701403793723532 35.42113811706015 25.361824931840594 24.515633157375717 26 13.576773594756075 35.49799872382388 29.08086315911596 21.844364522304076 27 18.120250594582053 31.747056093740937 30.246824061720517 19.885869249956496 28 15.836910493648123 31.158999941991993 28.357213295434768 24.646876268925112 29 16.21541272695632 31.646267184871512 26.83885376181913 25.299466326353038 30 18.14490399675155 31.30039445443471 28.195515981205403 22.359185567608332 31 19.65818782992053 32.876036893091246 25.920877081037187 21.54489819595104 32 19.12741458321248 32.45475375601833 24.50910725680144 23.90872440396775 33 17.84326237020709 28.33255989326527 28.130982075526422 25.693195661001216 34 16.922385289169906 28.37461569696618 30.01624224142932 24.686756772434595 35 18.553860432739718 28.779221532571498 27.176750391554034 25.490167643134754 36 19.886594350020303 28.945994547247523 31.062561633505425 20.104849469226753 37 19.41745460873601 28.03599396716747 32.746969081733276 19.799582342363244 38 19.211526190614308 28.822002436336213 26.56694123789083 25.399530135158656 39 18.993271071407854 25.18997621671791 30.77397180810952 25.042780903764722 40 20.737136724868034 25.471315041475723 31.869598004524626 21.92195022913162 41 19.206450490167644 27.248535297871108 29.800162422414296 23.74485178954696 42 20.289749985498 26.424096525320493 32.75204478217994 20.534108707001568 43 21.402053483380705 24.559139161204246 32.48158245837926 21.55722489703579 44 18.227565404025757 25.35747433145774 29.751580718139103 26.663379546377403 45 19.60235512500725 23.501943268171008 28.500783108068912 28.39491849875283 46 21.687742908521376 25.053657404721854 30.933493822147458 22.325105864609316 47 16.308950635187657 25.712048262660247 35.4494170195487 22.5295840826034 48 17.390799930390394 24.250246534021695 32.45185335576309 25.907100179824816 49 20.115725970183885 21.581153199141482 35.22898660015082 23.074134230523814 50 18.9968965717269 20.898834039097395 32.62225187075816 27.48201751841754 51 17.202273913800102 20.578339810893905 29.84439352630663 32.37499274899936 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 7170.0 1 4419.0 2 1668.0 3 2301.0 4 2934.0 5 2026.0 6 1118.0 7 1051.5 8 985.0 9 956.5 10 928.0 11 953.0 12 978.0 13 957.5 14 937.0 15 923.0 16 909.0 17 811.0 18 713.0 19 686.5 20 660.0 21 634.5 22 609.0 23 664.0 24 719.0 25 977.0 26 1173.0 27 1111.0 28 1248.0 29 1385.0 30 1486.0 31 1587.0 32 1842.0 33 2097.0 34 2145.5 35 2194.0 36 2379.0 37 2564.0 38 2785.5 39 3007.0 40 3550.0 41 4093.0 42 5281.0 43 6469.0 44 7453.0 45 8437.0 46 11116.0 47 13795.0 48 16307.0 49 18819.0 50 18375.5 51 17932.0 52 14233.0 53 10534.0 54 8504.0 55 6474.0 56 5352.0 57 4230.0 58 3657.0 59 3084.0 60 2803.5 61 2523.0 62 2220.5 63 1918.0 64 1672.0 65 1426.0 66 1184.5 67 943.0 68 773.0 69 603.0 70 517.5 71 432.0 72 362.5 73 293.0 74 225.0 75 137.5 76 118.0 77 99.0 78 80.0 79 56.0 80 32.0 81 17.5 82 3.0 83 5.5 84 8.0 85 4.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 137912.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.904025755554265 #Duplication Level Percentage of deduplicated Percentage of total 1 77.62092076588863 41.06459191368409 2 11.614424144405916 12.288995881431637 3 4.605200038376667 7.30900864319276 4 2.323158947931087 4.916178432623703 5 1.259577034305999 3.3318347932014616 6 0.8100217924644673 2.5712048262660248 7 0.4824495278299365 1.7866465572248973 8 0.2713778594043393 1.148558501073148 9 0.18777154918381053 0.8940483786762573 >10 0.7346390537410397 6.913829108416962 >50 0.041117857485505956 1.4668774290852138 >100 0.03700607173695536 4.843668426242822 >500 0.0054823809980674605 1.9874992748999363 >1k 0.0054823809980674605 4.684146412204885 >5k 0.0013705952495168651 4.792911421776205 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 6610 4.792911421776205 No Hit CCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTGC 2085 1.5118336330413598 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1721 1.2478972098149546 No Hit CTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTGCT 1586 1.1500087012007658 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTGC 1068 0.7744068681478044 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCC 905 0.6562155577469692 No Hit AAAACTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTC 701 0.5082951447299727 No Hit ACTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTGC 616 0.4466616393062243 No Hit GAATCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTC 519 0.3763269331167701 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 454 0.32919542896919773 No Hit CGCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG 420 0.3045420267996984 No Hit TCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTGC 413 0.2994663263530367 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCG 408 0.2958408260339927 No Hit AAAAACTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTT 376 0.2726376239921109 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTC 368 0.26683682348164045 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 360 0.26103602297117 No Hit CGTTCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTC 349 0.25305992226927315 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCG 340 0.24653402169499392 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCT 336 0.24363362143975867 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGC 305 0.22115551946168568 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGC 287 0.20810371831312724 No Hit CGTCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCT 256 0.18562561633505426 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGT 221 0.16024711410174602 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 205 0.14864551308080515 No Hit CGTTTCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTT 176 0.1276176112303498 No Hit AAAAAACTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCT 164 0.11891641046464412 No Hit ACCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG 161 0.11674111027321771 No Hit GCCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCTG 155 0.11239050989036486 No Hit AAAAAAACTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTC 141 0.1022391089970416 No Hit GACCTGTCTCTTATACACATCTGACGCATGCCTGTTCGTATGCCGTCTTCT 141 0.1022391089970416 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.1681362027959858 0.0 2 0.0 0.0 0.0 4.24981147398341 0.0 3 0.0 0.0 0.0 5.2286965601252975 0.0 4 0.0 0.0 0.0 6.384506061836533 0.0 5 0.0 0.0 0.0 9.975201577817739 0.0 6 0.0 0.0 0.0 11.94674865131388 0.0 7 0.0 0.0 0.0 14.025610534253728 0.0 8 0.0 0.0 0.0 16.99271999535936 0.0 9 0.0 0.0 0.0 18.260920006960962 0.0 10 0.0 0.0 0.0 21.222228667556124 0.0 11 0.0 0.0 0.0 25.332095829224432 0.0 12 0.0 0.0 0.0 28.368089796391903 0.0 13 0.0 0.0 0.0 29.472417193572714 0.0 14 0.0 0.0 0.0 29.95388363594176 0.0 15 0.0 0.0 0.0 30.72393990370671 0.0 16 0.0 0.0 0.0 32.25607633853472 0.0 17 0.0 0.0 0.0 33.90495388363594 0.0 18 0.0 0.0 0.0 35.70827774232844 0.0 19 0.0 0.0 0.0 36.85031034282731 0.0 20 0.0 0.0 0.0 37.846597830500606 0.0 21 0.0 0.0 0.0 38.97920413016996 0.0 22 0.0 0.0 0.0 40.1843204362202 0.0 23 0.0 0.0 0.0 41.292998433783865 0.0 24 0.0 0.0 0.0 42.25375601833053 0.0 25 7.251000638088056E-4 0.0 0.0 43.012935785138346 0.0 26 7.251000638088056E-4 0.0 0.0 43.71773304716051 0.0 27 7.251000638088056E-4 0.0 0.0 44.41745460873601 0.0 28 7.251000638088056E-4 0.0 0.0 45.13022797146006 0.0 29 7.251000638088056E-4 0.0 0.0 45.84010093392888 0.0 30 7.251000638088056E-4 0.0 0.0 46.52314519403678 0.0 31 7.251000638088056E-4 0.0 0.0 47.18226115203898 0.0 32 7.251000638088056E-4 0.0 0.0 47.892134114507805 0.0 33 7.251000638088056E-4 0.0 0.0 48.51572016938338 0.0 34 7.251000638088056E-4 0.0 0.0 49.18426242821509 0.0 35 7.251000638088056E-4 0.0 0.0 49.862956087940134 0.0 36 7.251000638088056E-4 0.0 0.0 50.433609838157665 0.0 37 7.251000638088056E-4 0.0 0.0 50.97525958582284 0.0 38 7.251000638088056E-4 0.0 0.0 51.50893323278613 0.0 39 7.251000638088056E-4 0.0 0.0 52.0832124833227 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGATGG 20 7.011686E-4 45.000004 2 AGCGTTG 20 7.011686E-4 45.000004 1 GAAATCT 30 2.1515825E-6 45.000004 9 GGAATGT 20 7.011686E-4 45.000004 26 GGGTGAT 20 7.011686E-4 45.000004 7 CGTATGG 20 7.011686E-4 45.000004 2 GATAAAG 30 2.1515825E-6 45.000004 1 TACCAGG 20 7.011686E-4 45.000004 2 CCGATTG 20 7.011686E-4 45.000004 11 TGGGTAT 20 7.011686E-4 45.000004 6 TAGGGTC 20 7.011686E-4 45.000004 5 TAAGGGA 30 2.1515825E-6 45.000004 4 CGACTGG 20 7.011686E-4 45.000004 2 TGAGCGG 30 2.1515825E-6 45.000004 2 AGGGATT 60 0.0 45.000004 6 TAATGGG 40 6.7393557E-9 45.000004 3 CCTAGGG 25 3.8729137E-5 45.0 3 AGGGTGC 25 3.8729137E-5 45.0 6 TACGGGA 25 3.8729137E-5 45.0 4 TGCGGGA 25 3.8729137E-5 45.0 4 >>END_MODULE