##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552732_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 653800 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.989547262159682 33.0 33.0 33.0 27.0 33.0 2 32.12273631079841 33.0 33.0 33.0 33.0 33.0 3 32.14383909452432 33.0 33.0 33.0 33.0 33.0 4 32.103374120526155 33.0 33.0 33.0 33.0 33.0 5 32.13394004282655 33.0 33.0 33.0 33.0 33.0 6 35.640388498011625 37.0 37.0 37.0 33.0 37.0 7 35.99890180483328 37.0 37.0 37.0 37.0 37.0 8 36.06165035178954 37.0 37.0 37.0 37.0 37.0 9 35.946726827776075 37.0 37.0 37.0 37.0 37.0 10 35.945888650963596 37.0 37.0 37.0 33.0 37.0 11 35.90952584888345 37.0 37.0 37.0 33.0 37.0 12 35.890032119914345 37.0 37.0 37.0 33.0 37.0 13 35.92249311716121 37.0 37.0 37.0 37.0 37.0 14 35.94061027837259 37.0 37.0 37.0 37.0 37.0 15 35.96092230039768 37.0 37.0 37.0 37.0 37.0 16 35.978291526460694 37.0 37.0 37.0 37.0 37.0 17 35.98305750994188 37.0 37.0 37.0 37.0 37.0 18 35.97336035484858 37.0 37.0 37.0 37.0 37.0 19 35.97005659223004 37.0 37.0 37.0 37.0 37.0 20 35.959687977974916 37.0 37.0 37.0 37.0 37.0 21 35.86607372285103 37.0 37.0 37.0 37.0 37.0 22 35.914014989293364 37.0 37.0 37.0 37.0 37.0 23 35.93119914346895 37.0 37.0 37.0 37.0 37.0 24 35.95256806362802 37.0 37.0 37.0 37.0 37.0 25 35.945299785867235 37.0 37.0 37.0 37.0 37.0 26 35.904420312022026 37.0 37.0 37.0 37.0 37.0 27 35.89413276231264 37.0 37.0 37.0 37.0 37.0 28 35.877727133680025 37.0 37.0 37.0 37.0 37.0 29 35.891032425818295 37.0 37.0 37.0 37.0 37.0 30 35.85997705720404 37.0 37.0 37.0 37.0 37.0 31 35.81680483328235 37.0 37.0 37.0 33.0 37.0 32 35.79830223309881 37.0 37.0 37.0 33.0 37.0 33 35.75299785867238 37.0 37.0 37.0 33.0 37.0 34 35.69670847353931 37.0 37.0 37.0 33.0 37.0 35 35.682955032119914 37.0 37.0 37.0 33.0 37.0 36 35.671852248394 37.0 37.0 37.0 33.0 37.0 37 35.665619455490976 37.0 37.0 37.0 33.0 37.0 38 35.65685377791373 37.0 37.0 37.0 33.0 37.0 39 35.64512695013766 37.0 37.0 37.0 33.0 37.0 40 35.62253747323341 37.0 37.0 37.0 33.0 37.0 41 35.60919853166106 37.0 37.0 37.0 33.0 37.0 42 35.614587029672684 37.0 37.0 37.0 33.0 37.0 43 35.61620220250841 37.0 37.0 37.0 33.0 37.0 44 35.57796115019884 37.0 37.0 37.0 33.0 37.0 45 35.53726674824105 37.0 37.0 37.0 33.0 37.0 46 35.54962526766595 37.0 37.0 37.0 33.0 37.0 47 35.53883450596513 37.0 37.0 37.0 33.0 37.0 48 35.5450994187825 37.0 37.0 37.0 33.0 37.0 49 35.53637656775772 37.0 37.0 37.0 33.0 37.0 50 35.518826858366474 37.0 37.0 37.0 33.0 37.0 51 35.1980483328235 37.0 37.0 37.0 33.0 37.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 392.0 15 1500.0 16 1121.0 17 661.0 18 567.0 19 518.0 20 534.0 21 610.0 22 697.0 23 924.0 24 1387.0 25 2035.0 26 2975.0 27 4496.0 28 6508.0 29 7956.0 30 9348.0 31 11675.0 32 14984.0 33 21120.0 34 32525.0 35 68822.0 36 462445.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.266289385133064 19.626797185683696 25.581982257571124 12.524931171612113 2 30.28433771795656 23.880238605078006 26.1408687672071 19.694554909758335 3 30.7089323952279 24.495105536861423 27.432395227898436 17.363566840012236 4 28.244723156928725 26.525390027531355 26.778219639033345 18.45166717650658 5 24.143927806668707 30.700520036708472 26.301315386968493 18.854236769654328 6 25.148516365861116 35.46497399816458 24.512083205873356 14.874426430100948 7 80.16717650657694 6.453808504129703 8.32058733557663 5.058427653716733 8 81.27944325481799 4.7162740899357605 7.90868767207097 6.095594983175283 9 76.12740899357601 6.955490975833587 10.904099112878555 6.013000917711839 10 39.12236157846436 25.163352707249924 19.685377791373508 16.028907922912204 11 28.64698684613031 26.971856836953194 23.937595594983176 20.443560721933313 12 24.542061792597124 23.62878556133374 31.404557968797796 20.424594677271337 13 24.167023554603855 25.676506576934845 32.65478739675742 17.501682471703887 14 21.281431630468035 28.04343836035485 30.218109513612724 20.457020495564393 15 19.50107066381156 26.32119914346895 34.09605383909452 20.08167635362496 16 22.0414499847048 26.092994799632912 30.158458244111348 21.707096971550932 17 21.94249005812175 26.13520954420312 28.119914346895076 23.802386050780054 18 22.917100030590394 24.447996329152648 32.285102477821965 20.349801162434996 19 21.587029672682778 27.336647292750076 29.38895686754359 21.687366167023555 20 22.92673600489446 27.315845824411134 30.07464056286326 19.68277760783114 21 22.29060874885286 28.382991740593454 29.86417864790456 19.46222086264913 22 20.88635668400122 26.291373508718262 27.592382991740593 25.22988681553992 23 19.11777301927195 28.39568675435913 28.33435301315387 24.15218721321505 24 20.958397063322117 25.948914040991127 29.195472621596817 23.897216274089935 25 19.17834200061181 28.08504129703273 28.15769348424595 24.578923218109512 26 19.174059345365553 27.47017436524931 31.026001835423678 22.329764453961456 27 22.805445090241662 26.69302539002753 28.88467421229734 21.616855307433465 28 20.163505659223006 25.99984704802692 30.362496176200672 23.4741511165494 29 21.257877026613645 24.75099418782502 31.066228204343837 22.924900581217496 30 25.688436830835116 25.276690119302543 27.72468644845518 21.310186601407157 31 24.736463750382377 26.562710308962984 26.014377485469563 22.686448455185072 32 23.314622208626492 25.225298256347507 28.5672988681554 22.892780666870603 33 25.16243499541144 24.13475068828388 27.649434077699603 23.05338023860508 34 22.955185071887428 23.318598959926582 30.495258488834505 23.23095747935148 35 22.350871826246557 22.994952584888345 30.50061180789232 24.153563780972775 36 27.61410217191802 23.468491893545426 28.881921076781893 20.035484857754664 37 25.688589782808197 24.322881615172836 29.40838176812481 20.580146833894158 38 23.445396145610278 25.511471397981033 28.462526766595285 22.5806056898134 39 25.28143163046803 22.4585500152952 30.3380238605078 21.92199449372897 40 26.645763230345672 21.325940654634444 28.980575099418783 23.047721015601102 41 22.217344753747323 22.238146222086264 28.06531049250535 27.47919853166106 42 23.027072499235242 21.60828999694096 31.239063933924747 24.12557356989905 43 23.9788926277149 21.35071887427348 32.103395533802384 22.566992964209238 44 23.610125420617926 22.548791679412663 29.677271336800242 24.163811563169165 45 24.8372591006424 21.27745487916794 29.064086876720708 24.82119914346895 46 25.859437136739068 22.52278984398899 29.24013459773631 22.377638421535636 47 21.708473539308656 22.717344753747323 31.983175282961152 23.59100642398287 48 22.50642398286938 21.703273172223923 31.069287243805444 24.721015601101254 49 24.71918017742429 19.56087488528602 32.799938819210766 22.920006118078923 50 23.387427347812785 20.001835423676965 30.418170694401958 26.19256653410829 51 22.457173447537475 19.54359131232793 27.971397981033956 30.027837259100643 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 589.0 1 505.5 2 422.0 3 983.0 4 1544.0 5 1269.0 6 994.0 7 1013.0 8 1032.0 9 1163.0 10 1294.0 11 1366.0 12 1438.0 13 1433.0 14 1428.0 15 1468.5 16 1509.0 17 1431.0 18 1353.0 19 1406.5 20 1460.0 21 1682.0 22 1904.0 23 2035.0 24 2166.0 25 2461.5 26 3226.0 27 3695.0 28 4791.5 29 5888.0 30 7394.0 31 8900.0 32 9932.0 33 10964.0 34 12811.5 35 14659.0 36 16406.0 37 18153.0 38 19823.0 39 21493.0 40 24277.5 41 27062.0 42 29934.0 43 32806.0 44 36344.0 45 39882.0 46 44496.0 47 49110.0 48 56777.5 49 64445.0 50 75279.5 51 86114.0 52 85812.5 53 85511.0 54 70812.0 55 56113.0 56 46376.5 57 36640.0 58 29778.0 59 22916.0 60 19543.5 61 16171.0 62 14024.0 63 11877.0 64 9973.0 65 8069.0 66 6467.5 67 4866.0 68 3990.5 69 3115.0 70 2555.5 71 1996.0 72 1645.5 73 1295.0 74 1103.0 75 781.0 76 651.0 77 514.0 78 377.0 79 247.5 80 118.0 81 97.5 82 77.0 83 54.5 84 32.0 85 17.0 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 653800.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.398956977767995 #Duplication Level Percentage of deduplicated Percentage of total 1 69.60804974697493 26.032684577934496 2 12.431161015704575 9.298249120200841 3 4.77372489127548 5.355969954975356 4 2.410792876441773 3.6064455627342165 5 1.59178961532391 2.9765635670578385 6 1.1282771755812617 2.531783372913672 7 0.8721007915052761 2.2830961987248264 8 0.7405550155877763 2.215678813411004 9 0.6428744365101018 2.1638550053833328 >10 5.690303700881066 36.528663616005325 >50 0.07124678002573231 1.8286858141034046 >100 0.03459381212425011 2.282276282923201 >500 0.0028828176770208424 0.8099939918945279 >1k 0.001647324386869053 2.086054121737875 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 4952 0.757418170694402 No Hit GCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 3787 0.5792291220556746 No Hit CTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGCT 3204 0.4900581217497706 No Hit TCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 1601 0.24487610890180483 No Hit ACTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 968 0.14805750994187825 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCC 885 0.13536249617620066 No Hit ACCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG 754 0.11532578770266136 No Hit CGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG 731 0.11180789232181096 No Hit GCCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG 717 0.10966656469868462 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 696 0.1064545732639951 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5044356072193331 0.0 2 0.0 0.0 0.0 2.2794432548179873 0.0 3 0.0 0.0 0.0 2.982869379014989 0.0 4 0.0 0.0 0.0 3.680789232181095 0.0 5 0.0 0.0 0.0 5.410981951667177 0.0 6 0.0 0.0 0.0 6.3716732945855 0.0 7 0.0 0.0 0.0 7.546344447843377 0.0 8 0.0 0.0 0.0 9.595900887121443 0.0 9 0.0 0.0 0.0 10.357142857142858 0.0 10 0.0 0.0 0.0 12.410981951667177 0.0 11 0.0 0.0 0.0 15.258794738452126 0.0 12 0.0 0.0 0.0 17.373814622208627 0.0 13 0.0 0.0 0.0 18.201437748546955 0.0 14 0.0 0.0 0.0 18.497399816457634 0.0 15 0.0 0.0 0.0 19.06072193331294 0.0 16 0.0 0.0 0.0 20.365096359743042 0.0 17 0.0 0.0 0.0 21.931171612113797 0.0 18 0.0 0.0 0.0 23.751300091771185 0.0 19 0.0 0.0 0.0 24.765218721321506 0.0 20 0.0 0.0 0.0 25.74701743652493 0.0 21 0.0 0.0 0.0 26.90914652799021 0.0 22 0.0 0.0 0.0 28.1009483022331 0.0 23 1.5295197308045274E-4 0.0 0.0 29.353166105842764 0.0 24 1.5295197308045274E-4 0.0 0.0 30.25971245029061 0.0 25 9.177118384827164E-4 0.0 0.0 31.133680024472316 0.0 26 9.177118384827164E-4 0.0 0.0 31.946466809421842 0.0 27 9.177118384827164E-4 0.0 0.0 32.72162740899358 0.0 28 9.177118384827164E-4 0.0 0.0 33.483328234934234 0.0 29 9.177118384827164E-4 0.0 0.0 34.297797491587644 0.0 30 9.177118384827164E-4 0.0 0.0 35.238146222086264 0.0 31 9.177118384827164E-4 0.0 0.0 36.027225451208324 0.0 32 9.177118384827164E-4 0.0 0.0 36.802539002753136 0.0 33 9.177118384827164E-4 0.0 0.0 37.587029672682775 0.0 34 9.177118384827164E-4 0.0 0.0 38.28785561333741 0.0 35 9.177118384827164E-4 0.0 0.0 39.04282655246253 0.0 36 9.177118384827164E-4 0.0 0.0 39.72239216885898 0.0 37 9.177118384827164E-4 0.0 0.0 40.44279596206791 0.0 38 9.177118384827164E-4 0.0 0.0 41.173600489446315 0.0 39 9.177118384827164E-4 0.0 0.0 41.95870296726828 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTCA 35 1.2108467E-7 45.000004 31 TCGCTAG 35 1.2108467E-7 45.000004 1 TCGTTCG 20 7.031052E-4 45.0 45 TAGCGTG 20 7.031052E-4 45.0 1 ACTCGCG 20 7.031052E-4 45.0 10 ACGTCAA 20 7.031052E-4 45.0 32 CACGTAG 20 7.031052E-4 45.0 1 CGTCAAG 20 7.031052E-4 45.0 33 GCGTACG 25 3.8889535E-5 45.0 1 TGCGTAG 85 0.0 42.35294 1 TATACGG 60 3.6379788E-12 41.250004 2 TGTTGCG 50 1.0804797E-9 40.5 1 TGTAGCG 50 1.0804797E-9 40.5 1 TCGAGAG 50 1.0804797E-9 40.5 1 CGGACGG 90 0.0 40.0 2 CGTTTTT 820 0.0 39.786587 1 ACACGTA 40 3.4551704E-7 39.375 1 GCGCGAG 80 0.0 39.375 1 CGCATGG 80 0.0 39.375 2 TAAACGG 40 3.4551704E-7 39.375 2 >>END_MODULE