##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552635_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 804846 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.718880382085516 31.0 31.0 34.0 30.0 34.0 2 31.85774794184229 33.0 31.0 34.0 30.0 34.0 3 31.90465380954866 33.0 31.0 34.0 30.0 34.0 4 35.554800545694455 37.0 35.0 37.0 33.0 37.0 5 35.35902768976922 37.0 35.0 37.0 33.0 37.0 6 35.37098028691203 37.0 35.0 37.0 33.0 37.0 7 35.76580737184505 37.0 35.0 37.0 35.0 37.0 8 35.55700966396056 37.0 35.0 37.0 35.0 37.0 9 37.2731367242926 39.0 37.0 39.0 34.0 39.0 10 36.840400523826915 39.0 37.0 39.0 32.0 39.0 11 36.77362750141021 39.0 37.0 39.0 32.0 39.0 12 36.64631618968101 39.0 35.0 39.0 32.0 39.0 13 36.450335840645295 39.0 35.0 39.0 32.0 39.0 14 37.559074655275666 39.0 36.0 41.0 32.0 41.0 15 37.700724113681375 40.0 36.0 41.0 33.0 41.0 16 37.74629432214361 40.0 36.0 41.0 33.0 41.0 17 37.74548422928113 40.0 36.0 41.0 33.0 41.0 18 37.718431849074236 39.0 36.0 41.0 33.0 41.0 19 37.68512485618367 39.0 36.0 41.0 33.0 41.0 20 37.626937327140844 39.0 36.0 41.0 33.0 41.0 21 37.54257211938681 39.0 36.0 41.0 33.0 41.0 22 37.5706035688815 39.0 36.0 41.0 33.0 41.0 23 37.46882881942633 39.0 35.0 41.0 32.0 41.0 24 37.472878041265034 39.0 35.0 41.0 33.0 41.0 25 37.313044980033446 39.0 35.0 41.0 32.0 41.0 26 37.31601449221342 39.0 35.0 41.0 32.0 41.0 27 37.09473116596219 39.0 35.0 41.0 32.0 41.0 28 37.139821779570255 39.0 35.0 41.0 32.0 41.0 29 37.138227685793304 39.0 35.0 41.0 32.0 41.0 30 36.99049259112923 39.0 35.0 41.0 31.0 41.0 31 36.97926311368883 39.0 35.0 41.0 31.0 41.0 32 36.89231231813291 39.0 35.0 41.0 31.0 41.0 33 36.800022613021625 39.0 35.0 41.0 31.0 41.0 34 36.720075641799795 39.0 35.0 41.0 31.0 41.0 35 36.62492700466922 39.0 35.0 41.0 31.0 41.0 36 36.5807160624517 39.0 35.0 41.0 31.0 41.0 37 36.535143369042025 39.0 35.0 40.0 30.0 41.0 38 36.44377185200647 39.0 35.0 40.0 30.0 41.0 39 36.410341854218075 39.0 35.0 40.0 30.0 41.0 40 36.309414471836845 38.0 35.0 40.0 30.0 41.0 41 36.22854931253929 38.0 35.0 40.0 30.0 41.0 42 36.228139296213186 38.0 35.0 40.0 30.0 41.0 43 36.18537832082162 38.0 35.0 40.0 30.0 41.0 44 36.113994478446806 38.0 35.0 40.0 30.0 41.0 45 36.03234656070851 38.0 35.0 40.0 30.0 41.0 46 35.911578115564964 38.0 35.0 40.0 30.0 41.0 47 35.85727952925156 38.0 35.0 40.0 30.0 41.0 48 35.816066676109465 38.0 35.0 40.0 30.0 41.0 49 35.787310864438666 38.0 35.0 40.0 30.0 41.0 50 35.71973644647547 37.0 35.0 40.0 30.0 41.0 51 35.0087954714318 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 11.0 9 27.0 10 41.0 11 46.0 12 49.0 13 57.0 14 51.0 15 72.0 16 103.0 17 188.0 18 316.0 19 508.0 20 845.0 21 1201.0 22 1930.0 23 2585.0 24 3718.0 25 4911.0 26 6409.0 27 7847.0 28 9514.0 29 11974.0 30 14919.0 31 19595.0 32 25489.0 33 35070.0 34 57831.0 35 73555.0 36 72600.0 37 101160.0 38 156469.0 39 195634.0 40 120.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.313876194949096 20.19044637110702 22.91456999227181 13.581107441672073 2 30.35823002164389 24.69764402134073 26.010317501733248 18.93380845528213 3 31.573493562743682 24.99496798145235 26.199297753856015 17.23224070194795 4 28.992502913600866 26.595149879604296 24.60681919273998 19.805528014054865 5 24.419951145933506 30.780546837531652 24.08771367441722 20.711788342117625 6 24.46517718917656 35.793431289961056 23.881960027135626 15.859431493726749 7 80.92728298332848 6.520874800893588 7.812923217609331 4.738918998168594 8 80.44010903949327 5.825959251832027 7.848457965871732 5.885473742802971 9 75.38088031747688 8.011967506827393 10.104044748933335 6.503107426762386 10 39.29745566232546 26.86886683912202 17.179559816412084 16.654117682140434 11 30.007603939138665 26.383556605860004 22.8933236917373 20.71551576326403 12 27.180354999589984 22.83480317973873 30.04872981912068 19.936112001550608 13 24.202766740469606 25.579054875094116 29.639831719359975 20.5783466650763 14 19.90915032192494 29.466879378166755 27.67026238559923 22.953707914309074 15 19.672210584385088 26.767480983939784 32.68028914848307 20.880019283192063 16 20.73315889002368 25.282476399211774 32.47465974857302 21.509704962191524 17 21.51666281499815 24.929738111390254 27.09586678693812 26.457732286673476 18 23.00315836818472 24.808348429388978 29.43233860887673 22.756154593549574 19 23.630359099753246 27.829547515922297 26.311120388248188 22.22897299607627 20 25.034354398232704 25.575575948690805 26.721633703838993 22.668435949237494 21 23.82132730982076 27.51892908705516 27.025170032527964 21.634573570596114 22 21.56325557932822 25.266199993539136 25.961115542600698 27.20942888453195 23 21.11397708381479 28.461469647609604 26.62969064889432 23.794862619681282 24 21.9235729568141 25.406351028643986 28.980699413303913 23.689376601238003 25 21.27326221413786 27.049522517351143 27.45009604321821 24.22711922529279 26 20.407009539713187 27.66479550125117 27.630378979332693 24.29781597970295 27 21.445220576358707 27.14022309858035 26.604344185098768 24.81021213996218 28 19.067374379695 26.995723405471356 29.520926984789636 24.41597523004401 29 21.90543284056826 24.662357767821423 29.09140382135216 24.340805570258162 30 22.309609540210175 25.736103552729343 27.52302925031621 24.431257656744272 31 23.204811852205268 27.141341324924273 23.746157650034913 25.907689172835546 32 22.63575889052067 27.11847980855965 25.568121106397996 24.677640194521686 33 23.079570501686035 25.30334995763165 25.15748354343564 26.459595997246677 34 20.757635622218412 25.83599843945301 27.395178704994493 26.011187233334077 35 20.775651491092706 24.42367856707991 27.803579815269007 26.99709012655837 36 23.70093160679186 25.778596153798368 26.315593293623873 24.2048789457859 37 21.236733486903084 27.55173039314353 27.11761007695882 24.09392604299456 38 21.12950800525815 27.81004067858944 26.30378979332692 24.756661522825485 39 22.669305680838324 25.542277653116248 28.014303357412473 23.774113308632955 40 23.647753731769804 24.650430020152925 28.716673748766848 22.985142499310427 41 18.969591698287623 25.607507523178345 28.178682629968964 27.244218148565068 42 21.133980910633834 24.257435583950222 27.69225417036303 26.916329335052918 43 21.678308645380607 23.60252768852675 28.77693372396707 25.94222994212557 44 21.736456415264534 23.789644230076313 28.18862241969271 26.28527693496644 45 22.300539482087256 24.15045859704838 28.048595631959405 25.50040628890496 46 23.086279859749567 25.898122125226443 26.519483230332263 24.49611478469173 47 20.23939983549648 24.944772043347424 29.28088106296111 25.534947058194984 48 20.142735380433027 24.004095193366183 29.32250393242931 26.530665493771476 49 21.137211342294055 22.825360379501173 30.55516210554566 25.482266172659116 50 20.6396006192489 24.139649075723803 30.08886172013031 25.131888584896988 51 20.558094343514163 23.456164284844554 27.32820937173074 28.65753199991054 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1874.0 1 2173.5 2 2473.0 3 2777.5 4 3082.0 5 2269.5 6 1457.0 7 1492.0 8 1527.0 9 1647.0 10 1767.0 11 1697.5 12 1628.0 13 1711.0 14 1794.0 15 1871.0 16 1948.0 17 1954.0 18 1960.0 19 1962.0 20 1964.0 21 2301.0 22 2638.0 23 2794.0 24 2950.0 25 3591.0 26 5590.0 27 6948.0 28 7468.0 29 7988.0 30 9832.5 31 11677.0 32 13140.0 33 14603.0 34 15823.5 35 17044.0 36 19874.5 37 22705.0 38 23011.5 39 23318.0 40 27598.0 41 31878.0 42 36360.0 43 40842.0 44 47365.5 45 53889.0 46 60664.0 47 67439.0 48 74042.5 49 80646.0 50 80173.0 51 79700.0 52 70488.5 53 61277.0 54 55728.0 55 50179.0 56 44864.5 57 39550.0 58 38030.5 59 36511.0 60 33805.5 61 31100.0 62 28043.5 63 24987.0 64 22739.0 65 20491.0 66 17959.0 67 15427.0 68 13774.5 69 12122.0 70 9965.5 71 7809.0 72 6920.5 73 6032.0 74 4863.5 75 3227.5 76 2760.0 77 2190.5 78 1621.0 79 1091.5 80 562.0 81 462.0 82 362.0 83 318.5 84 275.0 85 188.5 86 102.0 87 54.0 88 6.0 89 4.0 90 2.0 91 1.0 92 0.0 93 1.0 94 2.0 95 1.5 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 804846.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.920357969667712 #Duplication Level Percentage of deduplicated Percentage of total 1 73.20793932732118 18.24368054258559 2 10.96412402607034 5.464597911070144 3 4.382962824847861 3.276750076888642 4 2.1971173163033146 2.1901180009453696 5 1.2580558380524025 1.5675600915048091 6 0.856048738316902 1.2799824599003757 7 0.5983421924206667 1.0437631136435166 8 0.4282096284908488 0.8536909782440301 9 0.3600057494394393 0.8074324932452396 >10 3.7099124444659486 23.020003492175448 >50 1.749120377435678 30.564069168676415 >100 0.2801010742666204 9.392788629441009 >500 0.00453401019496328 0.8481719392718695 >1k 0.0035264523738603288 1.4473911024075463 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 2950 0.36652974606322203 No Hit CCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 1873 0.2327153269072593 No Hit CTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGCT 1604 0.1992927839611553 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1418 0.17618277285344028 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1298 0.1612730882678177 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1287 0.15990636718080228 No Hit TCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTCTGC 1099 0.13654786132999355 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 970 0.12051995040044927 No Hit ATTCCTCCAGATCTCTACGCATTTCACCGCTACACCTGGAATTCTACCCCC 963 0.11965021879962129 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 817 0.10151010255378047 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.21320848957440305 0.0 2 0.0 0.0 0.0 1.0982225171026507 0.0 3 0.0 0.0 0.0 1.45853989458853 0.0 4 0.0 0.0 0.0 1.8829689157925864 0.0 5 0.0 0.0 0.0 3.183217659030423 0.0 6 0.0 0.0 0.0 4.189994110674589 0.0 7 1.2424737154685493E-4 0.0 0.0 5.083705454211116 0.0 8 1.2424737154685493E-4 0.0 0.0 6.506462105794152 0.0 9 1.2424737154685493E-4 0.0 0.0 7.132544611018754 0.0 10 2.4849474309370987E-4 0.0 0.0 8.399495058682033 0.0 11 2.4849474309370987E-4 0.0 0.0 9.833433973704286 0.0 12 2.4849474309370987E-4 0.0 0.0 11.01602045608725 0.0 13 2.4849474309370987E-4 0.0 0.0 11.459832067252616 0.0 14 2.4849474309370987E-4 0.0 0.0 11.640611992853291 0.0 15 2.4849474309370987E-4 0.0 0.0 11.9463847742301 0.0 16 2.4849474309370987E-4 0.0 0.0 12.637572902145255 0.0 17 2.4849474309370987E-4 0.0 0.0 13.488667397241212 0.0 18 2.4849474309370987E-4 0.0 0.0 14.551727908196103 0.0 19 2.4849474309370987E-4 0.0 0.0 15.033310720311713 0.0 20 2.4849474309370987E-4 0.0 0.0 15.498368632011589 0.0 21 2.4849474309370987E-4 0.0 0.0 16.06642761472381 0.0 22 2.4849474309370987E-4 0.0 0.0 16.629143960459515 0.0 23 2.4849474309370987E-4 0.0 0.0 17.241062265327777 0.0 24 3.727421146405648E-4 0.0 0.0 17.714320503549747 0.0 25 3.727421146405648E-4 0.0 0.0 18.101226818546653 0.0 26 3.727421146405648E-4 0.0 0.0 18.483535980796326 0.0 27 3.727421146405648E-4 0.0 0.0 18.85466287960678 0.0 28 3.727421146405648E-4 0.0 0.0 19.254987910730748 0.0 29 3.727421146405648E-4 0.0 0.0 19.677801716104696 0.0 30 3.727421146405648E-4 0.0 0.0 20.162490712508976 0.0 31 3.727421146405648E-4 0.0 0.0 20.608041786875997 0.0 32 4.969894861874197E-4 0.0 0.0 21.01768537086598 0.0 33 4.969894861874197E-4 0.0 0.0 21.44037492886838 0.0 34 4.969894861874197E-4 0.0 0.0 21.85585813932106 0.0 35 6.212368577342746E-4 0.0 0.0 22.336943961950485 0.0 36 6.212368577342746E-4 0.0 0.0 22.74248738267942 0.0 37 6.212368577342746E-4 0.0 0.0 23.14492461911968 0.0 38 6.212368577342746E-4 0.0 0.0 23.552580245164915 0.0 39 6.212368577342746E-4 0.0 0.0 23.958247913265396 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTC 30 2.1646865E-6 45.000004 15 AAGTAAC 20 7.032024E-4 45.000004 23 TCACCCG 20 7.032024E-4 45.000004 19 GTCGAAC 20 7.032024E-4 45.000004 15 GACCGAA 20 7.032024E-4 45.000004 9 TAAACTA 20 7.032024E-4 45.000004 19 ATTGTCG 20 7.032024E-4 45.000004 14 ATTCGTT 20 7.032024E-4 45.000004 29 CATTCGT 20 7.032024E-4 45.000004 28 ATCGTTA 20 7.032024E-4 45.000004 11 TCTCGAC 30 2.1646865E-6 45.000004 20 CCGAACA 20 7.032024E-4 45.000004 41 TATACGG 40 6.8102963E-9 45.000004 2 GTTGCGT 30 2.1646865E-6 45.000004 27 GATACCC 25 3.889759E-5 45.0 19 TCAATCG 35 1.2113196E-7 45.0 13 TGACACG 25 3.889759E-5 45.0 30 AATTCGC 25 3.889759E-5 45.0 10 TCATCGA 25 3.889759E-5 45.0 16 TTCATCG 25 3.889759E-5 45.0 15 >>END_MODULE