##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552591_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1071668 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.910270718170178 33.0 31.0 34.0 30.0 34.0 2 32.05679837412333 33.0 31.0 34.0 30.0 34.0 3 32.08837905022824 33.0 31.0 34.0 30.0 34.0 4 35.69745294251578 37.0 35.0 37.0 33.0 37.0 5 35.525804633524565 37.0 35.0 37.0 33.0 37.0 6 35.53008581015762 37.0 35.0 37.0 33.0 37.0 7 35.85932770223614 37.0 35.0 37.0 35.0 37.0 8 35.702339717151204 37.0 35.0 37.0 35.0 37.0 9 37.45890891582094 39.0 37.0 39.0 35.0 39.0 10 37.00964757742137 39.0 37.0 39.0 33.0 39.0 11 36.89215130058936 39.0 37.0 39.0 33.0 39.0 12 36.73459970811856 39.0 35.0 39.0 33.0 39.0 13 36.57767144302153 39.0 35.0 39.0 32.0 39.0 14 37.728805003041984 40.0 36.0 41.0 33.0 41.0 15 37.87384152554709 40.0 36.0 41.0 33.0 41.0 16 37.92088687914541 40.0 36.0 41.0 33.0 41.0 17 37.90200509859397 40.0 36.0 41.0 33.0 41.0 18 37.87455443290273 40.0 36.0 41.0 33.0 41.0 19 37.8543550801181 40.0 36.0 41.0 33.0 41.0 20 37.79151938846732 40.0 36.0 41.0 33.0 41.0 21 37.70748683360892 40.0 36.0 41.0 33.0 41.0 22 37.71460377654274 40.0 36.0 41.0 33.0 41.0 23 37.614562532426085 39.0 35.0 41.0 33.0 41.0 24 37.611043718763646 39.0 35.0 41.0 33.0 41.0 25 37.45503178223107 39.0 35.0 41.0 33.0 41.0 26 37.44477767368252 39.0 35.0 41.0 33.0 41.0 27 37.23115367819138 39.0 35.0 41.0 32.0 41.0 28 37.29002265627041 39.0 35.0 41.0 32.0 41.0 29 37.25131290660914 39.0 35.0 41.0 32.0 41.0 30 37.12680326369734 39.0 35.0 41.0 32.0 41.0 31 37.11403158440861 39.0 35.0 41.0 32.0 41.0 32 37.01683263846639 39.0 35.0 41.0 32.0 41.0 33 36.9009096100658 39.0 35.0 41.0 31.0 41.0 34 36.845507190659795 39.0 35.0 41.0 31.0 41.0 35 36.72319785605244 39.0 35.0 41.0 31.0 41.0 36 36.66141006356446 39.0 35.0 41.0 31.0 41.0 37 36.61218399728274 39.0 35.0 41.0 31.0 41.0 38 36.529404629045565 39.0 35.0 41.0 31.0 41.0 39 36.4815353262391 38.0 35.0 40.0 31.0 41.0 40 36.39086638772456 38.0 35.0 40.0 31.0 41.0 41 36.304424504604036 38.0 35.0 40.0 30.0 41.0 42 36.24503017725639 38.0 35.0 40.0 30.0 41.0 43 36.169969617456154 38.0 35.0 40.0 30.0 41.0 44 36.100154152218785 38.0 35.0 40.0 30.0 41.0 45 36.0329318408313 38.0 35.0 40.0 30.0 41.0 46 35.910561853111226 38.0 35.0 40.0 30.0 41.0 47 35.849167839293514 37.0 35.0 40.0 30.0 41.0 48 35.779549263391274 37.0 35.0 40.0 30.0 41.0 49 35.70322245322245 37.0 35.0 40.0 30.0 41.0 50 35.65191551861211 37.0 34.0 40.0 30.0 41.0 51 34.93035249722862 36.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 10.0 9 33.0 10 70.0 11 58.0 12 49.0 13 57.0 14 72.0 15 81.0 16 131.0 17 202.0 18 351.0 19 589.0 20 958.0 21 1433.0 22 2086.0 23 3117.0 24 4283.0 25 5935.0 26 7978.0 27 9888.0 28 12082.0 29 14795.0 30 18820.0 31 23925.0 32 31704.0 33 44966.0 34 77857.0 35 99403.0 36 97737.0 37 138909.0 38 204620.0 39 269319.0 40 148.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.36430312372862 20.232851965347475 24.6265634506209 13.776281460303005 2 29.905997006535607 23.992505141517707 27.076482642012266 19.02501520993442 3 31.760489256000923 24.807869601406406 26.538442875965316 16.89319826662735 4 28.521333099430045 27.41669994811826 25.041897304015798 19.020069648435896 5 25.07418342247786 30.203570508776973 24.146190797896363 20.57605527084881 6 25.787277403076324 34.91277149266377 23.392692512979764 15.907258591280135 7 83.02030106338904 6.018934968665668 6.777285502599685 4.183478465345611 8 84.4936118275436 4.87912301197759 6.076788706950287 4.550476453528518 9 79.55728826464913 6.492215872826286 8.337376874181183 5.6131189883434045 10 44.400597946378916 23.62588040325922 15.696559008946801 16.276962641415064 11 32.24002209639553 25.49017046324048 21.52942889029065 20.740378550073345 12 27.849949797885166 22.018386291276776 29.040617056775048 21.091046854063013 13 24.902675082208294 24.650078195859166 29.58126957229291 20.86597714963963 14 21.484638899360622 26.83461669099012 28.355703445470056 23.325040964179205 15 21.0289007416476 24.780155794518453 32.18506104502514 22.005882418808813 16 22.858571871139198 23.17051549547061 30.80272994994718 23.168182683443007 17 23.246751792532763 23.57530503850073 26.639127043076773 26.538816125889735 18 24.39402874770918 24.157201670666662 28.23924946905198 23.209520112572175 19 24.888678210042663 26.025504167335406 25.909050190917338 23.176767431704594 20 26.354057413303373 24.60706114207012 25.86211401292191 23.176767431704594 21 25.854649014433573 26.016732794111608 25.56948607217907 22.559132119275745 22 24.286999331882637 23.757171064172862 25.075209859770002 26.8806197441745 23 22.843735186643624 26.281740240447597 26.111818212356813 24.762706360551963 24 22.870795806163848 25.196049522799974 27.62711959300828 24.306035078027897 25 22.934154980833615 26.053497911666675 26.354897225633312 24.6574498818664 26 22.1956800053748 25.472814341755097 26.2905116136714 26.040994039198708 27 22.76964507664687 26.51212875629393 26.539189375814153 24.17903679124505 28 21.73098384947577 26.049112225054778 27.933464468473446 24.28643945699601 29 23.250577604258034 24.73788524057824 27.375642456432402 24.635894698731324 30 23.573905351284168 25.676142238081194 26.357136725179814 24.392815685454824 31 25.076609546986568 26.176483761762036 24.63272207437378 24.114184616877615 32 24.86255071533348 26.022144918015655 24.698040811146736 24.417263555504128 33 23.748399690949064 26.76920464173606 23.9282128420369 25.554182825277977 34 22.04078128674179 25.241026138692206 27.339903776169482 25.378288798396518 35 22.717296774747403 24.787714105487893 27.08572057764158 25.40926854212312 36 24.116424116424117 27.500587868630955 24.862364090371273 23.520623924573655 37 23.382521452539407 27.362858646521126 26.822486068446572 22.432133832492898 38 23.712287760761726 26.87483437034604 25.4176666654225 23.995211203469733 39 23.35788695752789 25.93564424803204 26.071693845481995 24.634774948958075 40 23.692785452210945 24.523919721406255 27.98086720887439 23.802427617508407 41 20.9427733215884 25.873591448097734 26.660308976287432 26.523326254026436 42 22.219661313018584 26.013746794716276 26.818660256721298 24.947931635543842 43 22.934901480682452 24.362395816614846 27.77473993811516 24.92796276458754 44 23.409395447097424 24.046906318001472 27.286342412015664 25.257355822885447 45 24.43387317714068 24.06678187647667 25.978008114453356 25.521336831929293 46 22.943672853906246 25.875457697719817 26.883978993494257 24.296890454879684 47 22.255306680800395 25.75060559800237 27.87150498102024 24.122582740176995 48 22.099008274950823 24.668834004561113 27.493216182623726 25.738941537864342 49 22.06709540641318 25.015396559382197 28.334334887297185 24.583173146907438 50 21.84986395040255 24.596983394110865 28.334428199778287 25.218724455708298 51 21.34961573920281 24.915738829562887 26.579313742688964 27.15533168854533 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1255.0 1 1735.5 2 2216.0 3 3025.0 4 3834.0 5 2930.0 6 2026.0 7 1916.0 8 1806.0 9 1913.5 10 2021.0 11 2191.5 12 2362.0 13 2352.0 14 2342.0 15 2206.0 16 2070.0 17 2043.0 18 2016.0 19 2210.5 20 2405.0 21 2694.0 22 2983.0 23 3173.5 24 3364.0 25 4370.5 26 7185.5 27 8994.0 28 9756.5 29 10519.0 30 12411.0 31 14303.0 32 15714.0 33 17125.0 34 21607.0 35 26089.0 36 27854.0 37 29619.0 38 32109.0 39 34599.0 40 37765.5 41 40932.0 42 47582.5 43 54233.0 44 63375.0 45 72517.0 46 81744.5 47 90972.0 48 88603.0 49 86234.0 50 80636.5 51 75039.0 52 68952.0 53 62865.0 54 61837.5 55 60810.0 56 59697.5 57 58585.0 58 56260.0 59 53935.0 60 51671.5 61 49408.0 62 47751.5 63 46095.0 64 42476.5 65 38858.0 66 34326.5 67 29795.0 68 26522.0 69 23249.0 70 20172.5 71 17096.0 72 15532.5 73 13969.0 74 11304.5 75 6938.5 76 5237.0 77 4043.0 78 2849.0 79 2332.5 80 1816.0 81 1290.5 82 765.0 83 516.5 84 268.0 85 158.5 86 49.0 87 45.0 88 41.0 89 60.5 90 80.0 91 42.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1071668.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.702066245026444 #Duplication Level Percentage of deduplicated Percentage of total 1 74.37463916296018 16.884579852274598 2 10.228813201526489 4.644303898181106 3 3.8140448138590877 2.5976009407718563 4 1.8250299405272348 1.657278024360238 5 1.0816796640087107 1.2278181694111845 6 0.7069901849301417 0.9630082807720541 7 0.4873201850176804 0.7744222585966944 8 0.3853877416727398 0.6999278433180541 9 0.2970849747161952 0.6069998498768162 >10 4.262027920847855 25.481505438956276 >50 2.303601364200796 36.09013489701492 >100 0.22634631669482852 6.749321727932219 >500 0.004551754083442622 0.7470124901598815 >1k 0.002482774954605066 0.8760863283741266 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 1917 0.1788800262767947 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1795 0.16749590358207953 No Hit CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 1697 0.1583512804338657 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1657 0.15461878118969682 No Hit CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 1149 0.10721604078875173 No Hit GGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1111 0.10367016650679127 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.11281478965500509 0.0 2 0.0 0.0 0.0 0.607464251988489 0.0 3 0.0 0.0 0.0 0.8184437717651362 0.0 4 0.0 0.0 0.0 1.0700142208221204 0.0 5 0.0 0.0 0.0 1.809888883497501 0.0 6 0.0 0.0 0.0 2.3961712022753314 0.0 7 0.0 0.0 0.0 2.9269325947961495 0.0 8 0.0 0.0 0.0 3.856231594113102 0.0 9 0.0 0.0 0.0 4.246837640015378 0.0 10 0.0 0.0 0.0 5.080024783794982 0.0 11 0.0 0.0 0.0 6.2222628649917695 0.0 12 0.0 0.0 0.0 7.044532448482179 0.0 13 0.0 0.0 0.0 7.370659569941437 0.0 14 0.0 0.0 0.0 7.501483668449557 0.0 15 0.0 0.0 0.0 7.729352747306069 0.0 16 0.0 0.0 0.0 8.221576085130843 0.0 17 0.0 0.0 0.0 8.801046592788065 0.0 18 0.0 0.0 0.0 9.479241705453555 0.0 19 0.0 0.0 0.0 9.848665818145172 9.331248110422257E-5 20 0.0 0.0 0.0 10.188043311921229 9.331248110422257E-5 21 0.0 0.0 0.0 10.624652411007887 9.331248110422257E-5 22 0.0 0.0 0.0 11.07021950828055 9.331248110422257E-5 23 3.732499244168903E-4 0.0 0.0 11.562629471067533 9.331248110422257E-5 24 3.732499244168903E-4 0.0 0.0 11.930094021655961 9.331248110422257E-5 25 4.665624055211129E-4 0.0 0.0 12.239798146440876 9.331248110422257E-5 26 4.665624055211129E-4 0.0 0.0 12.535878648984573 9.331248110422257E-5 27 4.665624055211129E-4 0.0 0.0 12.843156649260779 9.331248110422257E-5 28 4.665624055211129E-4 0.0 0.0 13.145302463076252 9.331248110422257E-5 29 4.665624055211129E-4 0.0 0.0 13.461818398981775 9.331248110422257E-5 30 4.665624055211129E-4 0.0 0.0 13.83497501091756 9.331248110422257E-5 31 4.665624055211129E-4 0.0 0.0 14.173792629806993 9.331248110422257E-5 32 4.665624055211129E-4 0.0 0.0 14.505705125094712 9.331248110422257E-5 33 4.665624055211129E-4 0.0 0.0 14.838550745193475 9.331248110422257E-5 34 4.665624055211129E-4 0.0 0.0 15.16953011567015 9.331248110422257E-5 35 4.665624055211129E-4 0.0 0.0 15.541940227757104 9.331248110422257E-5 36 4.665624055211129E-4 0.0 0.0 15.857243101408272 9.331248110422257E-5 37 4.665624055211129E-4 0.0 0.0 16.181783910688758 9.331248110422257E-5 38 4.665624055211129E-4 0.0 0.0 16.49801990915097 9.331248110422257E-5 39 4.665624055211129E-4 0.0 0.0 16.828719342184332 9.331248110422257E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACAC 20 7.033071E-4 45.000004 39 GACGTAT 20 7.033071E-4 45.000004 30 GTTCACG 20 7.033071E-4 45.000004 1 TTCGGAT 20 7.033071E-4 45.000004 40 TATCGTG 20 7.033071E-4 45.000004 35 TGTAACG 30 2.1653632E-6 45.000004 1 GTATTAC 35 1.211829E-7 45.0 28 GTATACG 35 1.211829E-7 45.0 1 ACGTATA 25 3.890629E-5 45.0 22 ACGCATT 95 0.0 42.63158 17 ACGGGTA 145 0.0 41.89655 5 TATACGG 65 0.0 41.53846 2 AGTACGG 115 0.0 41.086956 2 TTTAGCG 50 1.0822987E-9 40.5 1 TACGCAT 100 0.0 40.5 16 GGTAACG 85 0.0 39.705883 1 AATACGG 85 0.0 39.705883 2 TAGTAAG 85 0.0 39.705883 1 CATACGA 160 0.0 39.375004 18 CGATCTA 40 3.4579352E-7 39.375004 10 >>END_MODULE