##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552536_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 732798 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.204184509237194 33.0 31.0 34.0 30.0 34.0 2 32.42198259274725 34.0 31.0 34.0 30.0 34.0 3 32.223019167628735 34.0 31.0 34.0 30.0 34.0 4 35.857327667379 37.0 35.0 37.0 35.0 37.0 5 35.88581164249902 37.0 35.0 37.0 35.0 37.0 6 35.91492334858992 37.0 35.0 37.0 35.0 37.0 7 36.13038654581481 37.0 35.0 37.0 35.0 37.0 8 36.04182052898616 37.0 35.0 37.0 35.0 37.0 9 37.8566330694134 39.0 38.0 39.0 35.0 39.0 10 37.45221466215792 39.0 37.0 39.0 35.0 39.0 11 37.24945073540048 39.0 37.0 39.0 34.0 39.0 12 37.15299850709199 39.0 37.0 39.0 34.0 39.0 13 37.02295857794372 39.0 37.0 39.0 33.0 39.0 14 38.12803664857164 40.0 37.0 41.0 33.0 41.0 15 38.10953223125609 40.0 37.0 41.0 33.0 41.0 16 38.23726183750502 40.0 37.0 41.0 34.0 41.0 17 38.15881730026556 40.0 37.0 41.0 34.0 41.0 18 38.150749592657185 40.0 37.0 41.0 34.0 41.0 19 38.17721254697747 40.0 37.0 41.0 34.0 41.0 20 38.12177980835101 40.0 37.0 41.0 34.0 41.0 21 38.07300647654606 40.0 37.0 41.0 34.0 41.0 22 37.99997134271655 40.0 37.0 41.0 34.0 41.0 23 37.98621721129152 40.0 37.0 41.0 34.0 41.0 24 37.87337984001048 40.0 36.0 41.0 33.0 41.0 25 37.77022044274138 40.0 36.0 41.0 33.0 41.0 26 37.70871918318554 39.0 36.0 41.0 33.0 41.0 27 37.702286305366556 40.0 36.0 41.0 33.0 41.0 28 37.6971020663266 40.0 36.0 41.0 33.0 41.0 29 37.64389367874912 40.0 36.0 41.0 33.0 41.0 30 37.52630192767993 39.0 36.0 41.0 33.0 41.0 31 37.34618271338077 39.0 36.0 41.0 32.0 41.0 32 37.24505116007413 39.0 36.0 41.0 32.0 41.0 33 37.278207637029574 39.0 36.0 41.0 32.0 41.0 34 37.147170161490614 39.0 35.0 41.0 31.0 41.0 35 37.154716579466644 39.0 35.0 41.0 32.0 41.0 36 37.137934328423384 39.0 35.0 41.0 32.0 41.0 37 37.04172909860562 39.0 35.0 41.0 31.0 41.0 38 37.056147806080254 39.0 35.0 41.0 31.0 41.0 39 36.97774693708225 39.0 35.0 41.0 31.0 41.0 40 36.79973062153554 39.0 35.0 40.0 31.0 41.0 41 36.66755777171881 39.0 35.0 40.0 31.0 41.0 42 36.78738069699972 39.0 35.0 40.0 31.0 41.0 43 36.772186878239296 39.0 35.0 40.0 31.0 41.0 44 36.62865619174725 39.0 35.0 40.0 31.0 41.0 45 36.540438156217675 39.0 35.0 40.0 31.0 41.0 46 36.41187885338115 39.0 35.0 40.0 30.0 41.0 47 36.314665160112334 39.0 35.0 40.0 30.0 41.0 48 36.368236539946885 39.0 35.0 40.0 30.0 41.0 49 36.3225131618809 39.0 35.0 40.0 30.0 41.0 50 36.17180860209771 39.0 35.0 40.0 30.0 41.0 51 33.51820283352302 36.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 4.0 12 12.0 13 11.0 14 25.0 15 28.0 16 72.0 17 113.0 18 228.0 19 400.0 20 588.0 21 922.0 22 1398.0 23 2056.0 24 2707.0 25 3629.0 26 4477.0 27 5656.0 28 6845.0 29 8264.0 30 10908.0 31 14032.0 32 18621.0 33 26712.0 34 46534.0 35 54879.0 36 55527.0 37 89879.0 38 171573.0 39 206670.0 40 25.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.99562225879437 20.5849360942579 22.563789748334464 10.85565189861326 2 30.122762343783688 27.571854726677746 23.126973599818776 19.178409329719788 3 31.79539245467373 26.955859595686672 24.961722057101685 16.287025892537915 4 30.899647651876776 22.885843029047567 27.67529387361865 18.539215445457003 5 26.695897095789018 27.634491360511355 24.117423901266104 21.55218764243352 6 24.82403063327138 34.054132243810706 25.465407929606794 15.656429193311116 7 71.55218764243352 5.6700482261141545 15.42744385219392 7.350320279258405 8 65.34133553857953 8.91992063297116 14.908474095180392 10.830269733268922 9 59.45185439916594 8.564024465132274 17.32646650236491 14.65765463333688 10 36.640929696860525 22.855821113048886 24.620563920753057 15.882685269337527 11 27.682389962854703 23.58125977418061 27.16669532395012 21.56965493901457 12 27.622346130857345 19.359632531748176 33.1339605184512 19.884060818943283 13 22.001424676377393 24.331125357874885 34.37127284736039 19.29617711838733 14 16.446414973839993 29.43990021806828 29.629993531641734 24.48369127644999 15 15.479163425664371 27.361837777941535 37.84207926331677 19.31691953307733 16 16.7930316403702 28.648003951975852 30.121261247983753 24.437703159670196 17 15.771604180142413 29.126171195882083 29.27641723913002 25.825807384845483 18 16.53661718509057 29.57718225213497 32.13818815007683 21.74801241269763 19 19.40807698710968 28.73233824328123 27.11142770586164 24.748157063747446 20 21.225085221302457 29.023823754977496 31.170936601901207 18.580154421818836 21 20.784445372394575 29.865529108976823 29.954776077445626 19.395249441182973 22 16.660116430448774 27.61525004162129 26.6657387165358 29.058894811394136 23 19.451881691816844 27.096689674371383 29.279965283748044 24.17146335006373 24 24.01248365852527 23.015892510623665 27.112519411897956 25.85910441895311 25 18.62955411996212 29.54129241619109 24.540050600574784 27.289102863272007 26 20.37328158646721 27.249801445964643 27.167650566731893 25.209266400836245 27 23.304102904210982 25.771904399302397 24.667097890551013 26.256894805935605 28 16.321824022445476 25.05055963580687 27.967461701587617 30.66015464016004 29 24.750340475820074 21.508519400980898 27.70818151796266 26.032958605236367 30 23.91272901945693 23.70666950510236 25.296739346996034 27.083862128444675 31 21.10335999825327 23.82621131607892 25.9407094451677 29.129719240500112 32 22.96772098177124 23.764802851536167 30.438401851533435 22.829074315159158 33 23.293322307102365 21.043043239746833 29.35078971285402 26.312844740296782 34 20.526393358060474 20.024754434373456 34.67940687611047 24.7694453314556 35 20.93237154031534 18.735313142230194 32.72429782832377 27.608017489130702 36 22.804510929342054 21.28744892862699 31.054260519269977 24.853779622760978 37 17.62627627258808 21.36386835116908 37.316695733339884 23.693159642902955 38 19.357722046184627 22.54836940057151 31.756091037366367 26.3378175158775 39 25.425697122535816 18.63692313570725 36.22266982169711 19.714709920059825 40 24.576486289536817 18.009874481098475 36.98413478202725 20.429504447337465 41 18.695738798413753 22.584532163024463 32.870995826953674 25.84873321160811 42 19.990775083993135 18.879281875769312 35.62864527468689 25.501297765550667 43 24.953670725083857 18.409029500626367 31.446455912816358 25.19084386147342 44 21.317607307880206 19.81514687540086 29.47947456188472 29.38777125483421 45 21.444108744838278 17.272836443330906 29.45682166163117 31.826233150199645 46 24.64772010840641 20.01097164566497 31.813405604272937 23.527902641655682 47 17.43004211256035 18.158892355055553 39.61255352771159 24.798512004672503 48 18.838888752425635 17.106624199301855 34.21488595765818 29.83960109061433 49 20.728904827797017 15.414070453249055 39.08430426938938 24.772720449564545 50 20.293177656052556 15.254817835201514 35.35012377217186 29.101880736574063 51 18.923495970240094 15.430309580539248 30.795116798899556 34.8510776503211 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 344.0 1 683.5 2 1023.0 3 1070.0 4 1117.0 5 952.5 6 788.0 7 791.0 8 794.0 9 861.0 10 928.0 11 969.0 12 1010.0 13 1018.0 14 1026.0 15 1146.5 16 1267.0 17 1323.5 18 1380.0 19 1344.0 20 1308.0 21 1725.0 22 2142.0 23 2200.0 24 2258.0 25 3045.5 26 4396.0 27 4959.0 28 5546.5 29 6134.0 30 8057.5 31 9981.0 32 10648.5 33 11316.0 34 12532.0 35 13748.0 36 14383.5 37 15019.0 38 16258.5 39 17498.0 40 20446.0 41 23394.0 42 27422.5 43 31451.0 44 38474.0 45 45497.0 46 73114.5 47 100732.0 48 107607.0 49 114482.0 50 114334.0 51 114186.0 52 90271.0 53 66356.0 54 53266.0 55 40176.0 56 33406.0 57 26636.0 58 24047.0 59 21458.0 60 20080.0 61 18702.0 62 16341.5 63 13981.0 64 10688.0 65 7395.0 66 5741.0 67 4087.0 68 3154.5 69 2222.0 70 1873.5 71 1525.0 72 1270.0 73 1015.0 74 827.5 75 497.5 76 355.0 77 282.0 78 209.0 79 189.5 80 170.0 81 129.5 82 89.0 83 79.5 84 70.0 85 51.0 86 32.0 87 21.5 88 11.0 89 9.0 90 7.0 91 7.5 92 8.0 93 14.5 94 21.0 95 18.5 96 16.0 97 8.0 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 732798.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.283511424413312 #Duplication Level Percentage of deduplicated Percentage of total 1 60.031931613926744 13.97754165562462 2 13.874643829531466 6.46100856229123 3 7.0729030422286145 4.940460563624929 4 4.181025588110808 3.8939582818616953 5 2.7470592106330223 3.1980592257156895 6 1.8852380966281894 2.633697765634899 7 1.3772582738099115 2.2447186126834584 8 1.0290789871923083 1.9168457883932628 9 0.8111662695193175 1.6998119193106578 >10 6.192374707603887 31.4949686359705 >50 0.6408313807004022 9.567463852035322 >100 0.12852328526581394 5.569879620429143 >500 0.017850456286918604 2.9057470689205265 >1k 0.006545167305203488 2.5872426104744366 >5k 0.0029750760478197674 5.404462341879935 >10k+ 5.950152095639534E-4 1.5041334951497165 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTGC 10857 1.4815815545348106 TruSeq Adapter, Index 20 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTGC 8565 1.1688077751303907 TruSeq Adapter, Index 20 (95% over 21bp) GAATGATACCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCG 8507 1.1608929063671025 No Hit GAATCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTC 7702 1.0510399864628452 No Hit CTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTGCT 7369 1.005597722701208 TruSeq Adapter, Index 22 (95% over 23bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGC 6867 0.9370931689224044 No Hit TCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTGC 3466 0.4729816402337343 TruSeq Adapter, Index 20 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTGC 2419 0.33010461273092995 TruSeq Adapter, Index 22 (95% over 22bp) GCCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTG 1791 0.24440568888015524 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCT 1779 0.24276812982568183 No Hit AGCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTG 1673 0.22830302484450013 TruSeq Adapter, Index 22 (95% over 21bp) GGCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTG 1408 0.19214026239154583 No Hit CGCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTG 1381 0.18845575451898067 TruSeq Adapter, Index 22 (95% over 21bp) ACCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTG 1272 0.17358125977418062 TruSeq Adapter, Index 22 (95% over 21bp) GAATGATCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTC 1252 0.1708519946833916 No Hit GAACTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCT 1151 0.15706920597490714 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 1083 0.14778970466622451 No Hit AAGGCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTC 994 0.13564447501221347 No Hit TGCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTG 965 0.1316870406305694 TruSeq Adapter, Index 22 (95% over 21bp) GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTA 956 0.13045887133971437 No Hit GGCCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCT 909 0.1240450983763602 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCCTGTTTT 814 0.11108108919511243 No Hit GGGCCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTC 801 0.10930706688609956 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCC 782 0.10671426504985002 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 780 0.10644133854077113 No Hit AGGCCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTC 768 0.10480377948629772 No Hit GGGCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCT 760 0.10371207344998214 No Hit AGCCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCT 748 0.10207451439550871 No Hit GTCTGTCTCTTATACACATCTGACGCGCCTGTTTTCGTATGCCGTCTTCTG 738 0.10070988185011422 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3646325453945017E-4 0.0 0.0 1.0600465612624488 0.0 2 1.3646325453945017E-4 0.0 0.0 4.7034789942112285 0.0 3 1.3646325453945017E-4 0.0 0.0 6.293275909595823 0.0 4 1.3646325453945017E-4 0.0 0.0 8.040278494209865 0.0 5 1.3646325453945017E-4 0.0 0.0 13.393868433047034 0.0 6 1.3646325453945017E-4 0.0 0.0 15.29084413439993 0.0 7 1.3646325453945017E-4 0.0 0.0 17.483126318576197 0.0 8 1.3646325453945017E-4 0.0 0.0 20.519570195333504 0.0 9 1.3646325453945017E-4 0.0 0.0 21.48600296398189 0.0 10 1.3646325453945017E-4 0.0 0.0 24.86810826448762 0.0 11 1.3646325453945017E-4 0.0 0.0 28.392544739478 0.0 12 1.3646325453945017E-4 0.0 0.0 31.73016301900387 0.0 13 1.3646325453945017E-4 0.0 0.0 32.791437749557176 0.0 14 1.3646325453945017E-4 0.0 0.0 33.279976200808406 0.0 15 1.3646325453945017E-4 0.0 0.0 34.25732602981995 0.0 16 1.3646325453945017E-4 0.0 0.0 35.85080745307711 0.0 17 1.3646325453945017E-4 0.0 0.0 37.60313210461819 0.0 18 1.3646325453945017E-4 0.0 0.0 39.21189741238377 0.0 19 1.3646325453945017E-4 0.0 0.0 40.545279872488734 0.0 20 1.3646325453945017E-4 0.0 0.0 41.801014740760756 0.0 21 5.458530181578007E-4 0.0 0.0 43.256941203442146 0.0 22 8.18779527236701E-4 0.0 0.0 44.757081760594325 0.0 23 0.0010917060363156014 0.0 0.0 46.075589725954494 0.0 24 0.001637559054473402 0.0 0.0 47.0850084197828 0.0 25 0.0019104855635523022 0.0 0.0 47.96492348505318 0.0 26 0.0019104855635523022 0.0 0.0 48.74644854380061 0.0 27 0.0019104855635523022 0.0 0.0 49.47147781516871 0.0 28 0.0019104855635523022 0.0 0.0 50.271698339788045 0.0 29 0.0019104855635523022 0.0 0.0 51.06454984866225 0.0 30 0.0020469488180917526 0.0 0.0 51.92863517640605 0.0 31 0.0020469488180917526 0.0 0.0 52.81373584534892 0.0 32 0.002319875327170653 0.0 0.0 53.57001520200656 0.0 33 0.002319875327170653 0.0 0.0 54.28235339070248 0.0 34 0.002456338581710103 0.0 0.0 54.952797360254806 0.0 35 0.002456338581710103 0.0 0.0 55.61136902666219 0.0 36 0.002592801836249553 0.0 0.0 56.35454791088404 0.0 37 0.002592801836249553 0.0 0.0 57.058152451289445 0.0 38 0.0027292650907890033 0.0 0.0 57.764213330276554 0.0 39 0.0027292650907890033 0.0 0.0 58.442572168592164 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 20 7.0316094E-4 45.000004 1 CGGGTAT 40 6.8084773E-9 45.000004 6 TCGTTCG 20 7.0316094E-4 45.000004 45 TCGTTAG 20 7.0316094E-4 45.000004 1 TCGCACA 20 7.0316094E-4 45.000004 16 TCGCAAA 20 7.0316094E-4 45.000004 10 TTAATCG 45 3.8380676E-10 45.000004 20 GATCGGC 20 7.0316094E-4 45.000004 10 GGTAACT 45 3.8380676E-10 45.000004 8 GATCGAT 20 7.0316094E-4 45.000004 12 ACGTTAG 20 7.0316094E-4 45.000004 1 TAGACCG 20 7.0316094E-4 45.000004 2 AACCCGA 20 7.0316094E-4 45.000004 36 CCCTACA 20 7.0316094E-4 45.000004 27 TTTCGCG 20 7.0316094E-4 45.000004 1 GACAATT 20 7.0316094E-4 45.000004 35 CGCATAG 20 7.0316094E-4 45.000004 27 CGTTGAT 45 3.8380676E-10 45.000004 25 CTCCCGT 20 7.0316094E-4 45.000004 13 GAATCGT 20 7.0316094E-4 45.000004 18 >>END_MODULE