##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552455_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2123245 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.817523177965803 31.0 31.0 34.0 30.0 34.0 2 31.997046030957332 33.0 31.0 34.0 30.0 34.0 3 32.04019507875916 33.0 31.0 34.0 30.0 34.0 4 35.64327291480729 37.0 35.0 37.0 33.0 37.0 5 35.60053973987929 37.0 35.0 37.0 33.0 37.0 6 35.606572015947286 37.0 35.0 37.0 33.0 37.0 7 35.91046582000664 37.0 35.0 37.0 35.0 37.0 8 35.902594848922284 37.0 35.0 37.0 35.0 37.0 9 37.61874536381812 39.0 37.0 39.0 35.0 39.0 10 37.07480436784262 39.0 37.0 39.0 33.0 39.0 11 36.905202649717765 39.0 37.0 39.0 33.0 39.0 12 36.73449554808795 39.0 35.0 39.0 33.0 39.0 13 36.70677053284006 39.0 35.0 39.0 33.0 39.0 14 37.822573937534294 40.0 37.0 41.0 33.0 41.0 15 37.83580980998425 40.0 37.0 41.0 33.0 41.0 16 37.851421762443806 40.0 37.0 41.0 33.0 41.0 17 37.81466434631896 40.0 36.0 41.0 33.0 41.0 18 37.795221465257185 40.0 36.0 41.0 33.0 41.0 19 37.78772633398407 40.0 36.0 41.0 33.0 41.0 20 37.67945149994466 40.0 36.0 41.0 33.0 41.0 21 37.62058123297123 39.0 36.0 41.0 32.0 41.0 22 37.594730707007436 39.0 36.0 41.0 32.0 41.0 23 37.547183674046096 39.0 36.0 41.0 32.0 41.0 24 37.54108028041983 39.0 36.0 41.0 32.0 41.0 25 37.47251023786704 39.0 36.0 41.0 32.0 41.0 26 37.40308442972902 39.0 36.0 41.0 32.0 41.0 27 37.324219767384356 39.0 35.0 41.0 32.0 41.0 28 37.206941733054826 39.0 35.0 41.0 32.0 41.0 29 37.15940129377439 39.0 35.0 41.0 31.0 41.0 30 37.092044959484184 39.0 35.0 41.0 31.0 41.0 31 36.97764647979861 39.0 35.0 41.0 31.0 41.0 32 36.8673629279711 39.0 35.0 41.0 31.0 41.0 33 36.783871385544295 39.0 35.0 41.0 31.0 41.0 34 36.66113566733938 39.0 35.0 41.0 30.0 41.0 35 36.60498388080509 39.0 35.0 41.0 30.0 41.0 36 36.49928717599712 39.0 35.0 40.0 30.0 41.0 37 36.355344767089996 38.0 35.0 40.0 30.0 41.0 38 36.277096142932166 38.0 35.0 40.0 30.0 41.0 39 36.26416828957563 38.0 35.0 40.0 30.0 41.0 40 36.1659219732061 38.0 35.0 40.0 30.0 41.0 41 36.08903918294874 38.0 35.0 40.0 30.0 41.0 42 36.00930933547471 38.0 35.0 40.0 29.0 41.0 43 35.915031002074656 38.0 35.0 40.0 29.0 41.0 44 35.81032146549268 38.0 34.0 40.0 29.0 41.0 45 35.73605259873448 38.0 34.0 40.0 29.0 41.0 46 35.600224656127764 38.0 34.0 40.0 28.0 41.0 47 35.467825898565636 38.0 34.0 40.0 28.0 41.0 48 35.35599848345339 37.0 34.0 40.0 28.0 41.0 49 35.27345266325836 37.0 34.0 40.0 28.0 41.0 50 35.160724268749014 37.0 34.0 40.0 27.0 41.0 51 33.92968639982668 36.0 32.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 38.0 9 100.0 10 133.0 11 119.0 12 70.0 13 39.0 14 58.0 15 80.0 16 155.0 17 353.0 18 683.0 19 1180.0 20 1948.0 21 3078.0 22 4768.0 23 6855.0 24 9793.0 25 13357.0 26 17517.0 27 22414.0 28 27629.0 29 34432.0 30 42921.0 31 54669.0 32 69439.0 33 94151.0 34 150107.0 35 171775.0 36 190690.0 37 270214.0 38 415860.0 39 518523.0 40 94.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.027111802924296 21.032099451547044 25.23147352283886 10.7093152226898 2 31.41135384753055 24.985953104799492 25.774086363090458 17.8286066845795 3 32.65798341689254 24.67600300483458 25.885425374838984 16.780588203433894 4 29.75478571714522 26.748538204493595 24.77952379494594 18.717152283415246 5 26.236821469025006 30.315154398102905 23.320059625714414 20.127964507157674 6 26.694046141636974 36.25398858822228 22.15048192742712 14.901483342713629 7 83.51155895810423 6.0807396226059645 6.329462685653328 4.078238733636486 8 84.8359468643515 4.992829372022541 5.901108915834018 4.270114847791941 9 78.27269109311455 7.462680943555737 8.521767389067206 5.742860574262509 10 41.73785879632355 26.539047542794165 15.637243935579736 16.085849725302545 11 31.363596758734865 26.615675534382515 21.751517135328235 20.26921057155439 12 27.440074037616952 23.708851310140847 27.962858737451402 20.888215914790802 13 25.405311209963994 23.804412585452926 29.08491483554653 21.705361369036545 14 21.58356666329133 26.559629246742606 28.97183320813189 22.884970881834175 15 22.527923061163456 25.14702730961335 30.53684336946513 21.78820625975806 16 24.604885446568815 25.281350009066312 28.023567699441188 22.09019684492369 17 24.439289860567197 24.9933003492296 26.652694342857274 23.914715447345923 18 25.167043840913315 24.437170463135434 27.52353119870764 22.872254497243606 19 25.43559504437783 25.701461677762104 26.332853721544147 22.53008955631592 20 26.675960616885945 25.743143160586747 26.392667826840523 21.18822839568679 21 25.96026365304051 26.24153124109559 26.09034755762995 21.707857548233953 22 24.35244166358569 25.006676101910045 25.6771121561572 24.963770078347057 23 24.221886781789195 25.832628829927774 26.4435804629235 23.50190392535953 24 23.597936177878672 24.856669861462056 27.289455526799784 24.255938433859495 25 24.020167244006227 26.501651952553757 25.456600627812616 24.0215801756274 26 23.801398331327757 26.71321491396424 25.770930815803165 23.714455938904834 27 24.542057087147267 25.919053147422932 25.977407223377426 23.561482542052378 28 22.253767228934958 26.814098231716077 26.88276670850514 24.049367830843828 29 24.831613874046564 26.05384682408295 25.593937581390747 23.520601720479736 30 26.001709647261624 25.479678510958465 25.40055434017271 23.118057501607208 31 26.021208103633825 26.712131666388007 24.389130788015514 22.877529441962658 32 25.820524715706384 27.39650864596408 24.216988618835792 22.565978019493745 33 25.354021792115372 27.26388146445653 23.816469601953614 23.565627141474486 34 24.444941587051893 26.43726936834892 25.994503695993632 23.123285348605556 35 26.001709647261624 26.705961864975546 24.372411097164953 22.91991739059788 36 25.899884375095667 28.79272057628771 24.198055335112056 21.109339713504564 37 25.281114520462783 28.192931103099266 25.312293211570026 21.213661164867926 38 23.887351671615853 29.322758325110854 24.740197198156597 22.049692805116695 39 25.6146605785013 26.45398905919948 25.20533428784714 22.726016074452076 40 26.088604941963833 25.61164632437613 26.582424543564215 21.717324190095823 41 23.13129196112554 27.065270376240143 25.72684734922254 24.076590313411785 42 23.742620375886908 27.166718866640448 25.74733485772956 23.343325899743082 43 24.483326229427128 25.075391676419816 27.228652369368582 23.21262972478447 44 24.04404578840407 25.463665285918484 26.162077386264894 24.33021153941255 45 25.237407835647797 24.46321550268575 25.489992911793035 24.809383749873426 46 24.719803885090982 26.248172019715106 25.423632223318553 23.608391871875362 47 23.622709578969925 25.851467918210098 27.92122435234747 22.60459815047251 48 23.137603055700122 26.451775466326303 27.29765053020259 23.112970947770982 49 24.273882665448408 25.724351170025127 27.283709604873675 22.718056559652798 50 22.730725846522656 25.01294009876392 27.660350077358004 24.595983977355417 51 22.89759307098333 24.879465158283665 26.131793551851057 26.091148218881948 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 362.0 1 745.0 2 1128.0 3 2846.5 4 4565.0 5 3456.0 6 2347.0 7 2302.5 8 2258.0 9 2384.5 10 2511.0 11 2645.5 12 2780.0 13 2933.0 14 3086.0 15 3206.0 16 3326.0 17 3309.5 18 3293.0 19 3686.0 20 4079.0 21 4945.0 22 5811.0 23 6822.5 24 7834.0 25 9793.5 26 14370.0 27 16987.0 28 20985.0 29 24983.0 30 29381.5 31 33780.0 32 36727.0 33 39674.0 34 45419.0 35 51164.0 36 54397.5 37 57631.0 38 63629.0 39 69627.0 40 76421.5 41 83216.0 42 89158.5 43 95101.0 44 107356.5 45 119612.0 46 135453.0 47 151294.0 48 171839.0 49 192384.0 50 192842.5 51 193301.0 52 175992.5 53 158684.0 54 147196.0 55 135708.0 56 129521.0 57 123334.0 58 115484.0 59 107634.0 60 104826.0 61 102018.0 62 96461.0 63 90904.0 64 79842.5 65 68781.0 66 58845.0 67 48909.0 68 42027.5 69 35146.0 70 30054.0 71 24962.0 72 20654.5 73 16347.0 74 14208.5 75 9277.5 76 6485.0 77 5271.0 78 4057.0 79 3279.5 80 2502.0 81 1686.0 82 870.0 83 697.0 84 524.0 85 371.0 86 218.0 87 172.0 88 126.0 89 84.5 90 43.0 91 31.0 92 19.0 93 15.5 94 12.0 95 8.0 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2123245.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.276952756269843 #Duplication Level Percentage of deduplicated Percentage of total 1 70.46413507755398 16.40190343211641 2 11.06723503305056 5.152230140137048 3 4.326596311088666 3.021299337859867 4 2.166481624620308 2.0171636169445457 5 1.257816531215563 1.4639067986579937 6 0.8344780853315933 1.1654464181043607 7 0.5878005995202833 0.9577544749598507 8 0.49270884796066217 0.9175008461261178 9 0.38224561791523887 0.800776187055377 >10 6.977503752113027 43.209905393099156 >50 1.3597950803082763 19.756210851449836 >100 0.07750738094710255 3.2979642085845304 >500 0.002644598531119944 0.4386258160896518 >1k 0.003051459843599936 1.3993124788152111 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 3878 0.18264496089711738 No Hit CCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC 3319 0.15631733502257159 No Hit CTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGCT 3131 0.14746296352987998 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 2508 0.11812108353016257 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2182 0.10276722658006966 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4129316211741933E-4 0.0 0.0 0.16917501277525673 0.0 2 1.4129316211741933E-4 0.0 0.0 0.6961043120318192 0.0 3 1.4129316211741933E-4 0.0 0.0 0.9641845382892695 0.0 4 1.4129316211741933E-4 0.0 0.0 1.283789670998872 0.0 5 1.4129316211741933E-4 0.0 0.0 2.1539671587593516 0.0 6 1.4129316211741933E-4 0.0 0.0 2.7959561897001994 0.0 7 1.4129316211741933E-4 0.0 0.0 3.4083678520378005 0.0 8 1.4129316211741933E-4 0.0 0.0 4.449839750005299 0.0 9 1.4129316211741933E-4 0.0 0.0 4.867313946341567 0.0 10 1.4129316211741933E-4 0.0 0.0 5.786284672753262 0.0 11 1.4129316211741933E-4 0.0 0.0 7.066306526095669 0.0 12 1.4129316211741933E-4 0.0 0.0 8.0220605723786 0.0 13 1.4129316211741933E-4 0.0 0.0 8.436614710031108 0.0 14 1.4129316211741933E-4 0.0 0.0 8.631881860077382 0.0 15 1.4129316211741933E-4 0.0 0.0 8.938158337827241 0.0 16 1.4129316211741933E-4 0.0 0.0 9.572517538013749 0.0 17 1.4129316211741933E-4 0.0 0.0 10.298057925486695 0.0 18 1.4129316211741933E-4 0.0 0.0 11.07507612169109 0.0 19 1.4129316211741933E-4 0.0 0.0 11.548266921622329 0.0 20 1.8839088282322577E-4 0.0 0.0 12.03261988136084 0.0 21 2.8258632423483867E-4 0.0 0.0 12.632833234035639 0.0 22 3.296840449406451E-4 0.0 0.0 13.24670492571512 0.0 23 3.7678176564645154E-4 0.0 0.0 13.847436353317681 0.0 24 4.709772070580644E-4 0.0 0.0 14.371775277935424 0.0 25 5.180749277638708E-4 0.0 0.0 14.842611191831372 0.0 26 5.180749277638708E-4 0.0 0.0 15.251749091602711 0.0 27 5.180749277638708E-4 0.0 0.0 15.660180525563465 0.0 28 5.180749277638708E-4 0.0 0.0 16.08500196632984 0.0 29 5.180749277638708E-4 0.0 0.0 16.529792840675476 0.0 30 5.180749277638708E-4 0.0 0.0 17.04353477813441 0.0 31 5.180749277638708E-4 0.0 0.0 17.499016835080266 0.0 32 5.180749277638708E-4 0.0 0.0 17.964577804257164 0.0 33 6.122703691754837E-4 0.0 0.0 18.42349799481454 0.0 34 6.122703691754837E-4 0.0 0.0 18.861789383702774 0.0 35 6.122703691754837E-4 0.0 0.0 19.337617655993537 0.0 36 6.593680898812901E-4 0.0 0.0 19.77680390157518 0.0 37 6.593680898812901E-4 0.0 0.0 20.209961638906485 0.0 38 7.064658105870967E-4 0.0 0.0 20.674203871903618 0.0 39 7.064658105870967E-4 0.0 0.0 21.158180049876485 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACA 35 6.2507897E-6 38.571426 40 GCTACGA 265 0.0 38.207546 10 CTACGCG 65 9.094947E-12 38.076927 1 CGTACCG 30 1.14024755E-4 37.500004 44 CTACGAA 265 0.0 37.35849 11 CGACCAA 510 0.0 36.61765 29 TATTACG 50 4.8823495E-8 36.0 1 TACGTTA 25 0.00210751 36.0 45 ACGGGTA 145 0.0 35.689655 5 AACACGT 495 0.0 35.454544 41 CGAATAT 280 0.0 35.357143 14 ACGTATG 70 2.1827873E-11 35.357143 1 GACACGA 525 0.0 35.142857 25 CACGACC 525 0.0 35.142857 27 ATACCGG 65 3.6743586E-10 34.615387 2 CGTGTAC 475 0.0 34.578945 18 TAAGGGA 1360 0.0 34.57721 4 GCGATTA 150 0.0 34.5 9 TACGAAT 290 0.0 34.137928 12 AGGGTAC 475 0.0 34.105263 6 >>END_MODULE