##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552279_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 466930 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 28.03378236566509 30.0 28.0 31.0 16.0 33.0 2 28.53995888034609 31.0 28.0 31.0 16.0 33.0 3 28.27688946951363 31.0 27.0 33.0 16.0 34.0 4 32.60959672756088 35.0 32.0 35.0 28.0 37.0 5 33.418199730152274 35.0 33.0 35.0 28.0 37.0 6 33.23809350437967 35.0 33.0 35.0 28.0 37.0 7 33.99764846979205 35.0 33.0 35.0 30.0 37.0 8 33.95860193176708 35.0 35.0 37.0 30.0 37.0 9 35.30961171910136 37.0 34.0 39.0 30.0 39.0 10 35.29546612982674 37.0 34.0 39.0 30.0 39.0 11 35.579433748099284 37.0 35.0 39.0 30.0 39.0 12 35.571809478936885 37.0 35.0 39.0 30.0 39.0 13 35.5593793502238 37.0 35.0 39.0 30.0 39.0 14 36.74575632321761 38.0 36.0 40.0 31.0 41.0 15 36.76470991369156 38.0 35.0 40.0 31.0 41.0 16 36.60658985286874 38.0 35.0 40.0 31.0 41.0 17 35.68865997044525 38.0 33.0 40.0 29.0 41.0 18 35.39362645364402 37.0 33.0 39.0 28.0 40.0 19 34.91208318163322 37.0 33.0 39.0 27.0 40.0 20 35.44793437988564 37.0 34.0 39.0 29.0 40.0 21 35.930972522647934 38.0 34.0 39.0 30.0 40.0 22 36.38354357184161 38.0 35.0 40.0 31.0 41.0 23 36.58211295054933 38.0 35.0 40.0 31.0 41.0 24 36.55106332855032 38.0 35.0 40.0 31.0 41.0 25 35.816724134238534 38.0 34.0 40.0 29.0 41.0 26 35.98120489152549 38.0 35.0 40.0 30.0 41.0 27 36.27281177050093 38.0 35.0 40.0 30.0 41.0 28 36.22011222238879 38.0 35.0 40.0 30.0 41.0 29 36.24872678988285 38.0 35.0 40.0 30.0 41.0 30 35.684027584434496 38.0 35.0 40.0 29.0 41.0 31 35.93226179512989 38.0 35.0 40.0 30.0 41.0 32 35.83228963656222 38.0 35.0 40.0 29.0 41.0 33 35.44605615402737 38.0 35.0 40.0 27.0 41.0 34 35.528342578116636 38.0 35.0 40.0 27.0 41.0 35 35.242734456984984 38.0 35.0 40.0 25.0 41.0 36 35.11852097744844 38.0 34.0 40.0 25.0 41.0 37 35.03992675561647 38.0 34.0 40.0 24.0 41.0 38 34.787876127042594 38.0 34.0 40.0 23.0 41.0 39 34.731295911592746 38.0 34.0 40.0 24.0 41.0 40 34.434726832715825 38.0 34.0 40.0 23.0 41.0 41 34.40183110958816 38.0 34.0 40.0 23.0 41.0 42 34.46353629023622 38.0 34.0 40.0 23.0 41.0 43 34.321328678816954 37.0 33.0 40.0 23.0 41.0 44 34.24279013984965 37.0 33.0 40.0 23.0 41.0 45 34.1819394770094 37.0 33.0 40.0 23.0 41.0 46 33.90385068425674 37.0 33.0 40.0 22.0 41.0 47 33.77770972094318 37.0 33.0 40.0 21.0 41.0 48 33.771543914505386 36.0 33.0 40.0 21.0 40.0 49 33.74119032831474 36.0 33.0 40.0 21.0 40.0 50 33.593907009616004 36.0 33.0 39.0 20.0 40.0 51 30.764187351423125 34.0 28.0 38.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 7.0 9 23.0 10 42.0 11 32.0 12 15.0 13 28.0 14 62.0 15 96.0 16 162.0 17 369.0 18 566.0 19 873.0 20 1205.0 21 1783.0 22 2545.0 23 3452.0 24 4751.0 25 6715.0 26 8762.0 27 9886.0 28 10765.0 29 11677.0 30 13934.0 31 17718.0 32 23366.0 33 31524.0 34 42064.0 35 48584.0 36 62644.0 37 76753.0 38 69996.0 39 16528.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.43771014927291 18.810528344719764 20.715310646135396 16.036450859871927 2 33.18484569421541 29.425181504722335 21.499368213650868 15.890604587411389 3 29.33523226179513 28.07165956353201 28.0560255284518 14.53708264622106 4 26.586212066048443 21.485875827211785 35.410018632343174 16.51789347439659 5 28.222859957595357 26.135823356820083 26.059152335467843 19.58216435011672 6 22.59010986657529 36.54701989591588 27.18094789368856 13.681922343820274 7 70.61122652217678 5.619043539716874 19.470584455914164 4.299145482192192 8 69.73079476581073 10.710384854260809 14.532799348938813 5.026021030989656 9 64.62638939455593 6.432441693615745 14.942925063714046 13.998243848114278 10 39.18060522990598 21.649497783393656 23.037286102841968 16.132610883858394 11 30.157197010258496 22.965326708500204 27.09121281562547 19.786263465615832 12 25.4605615402737 20.60030411410704 32.71346882830402 21.225665517315228 13 21.62294134024372 22.892296489837875 37.34542650932688 18.139335660591524 14 21.09673826911957 26.554943995888035 30.687255048936674 21.661062686055725 15 19.639132203970615 22.745593557920888 38.885057717430875 18.73021652067762 16 21.631293769944104 23.759235859764846 30.1400638211295 24.469406549161548 17 21.43918788683529 22.28599575953569 33.24309853725398 23.031717816375046 18 22.656929304178355 23.258090077741848 31.804338980146916 22.28064163793288 19 22.747092711969675 24.988542179769986 29.39091512646435 22.873449981795986 20 23.714689568029467 24.250315893174566 33.37930739082946 18.655687147966503 21 23.69884136808515 27.249694815068644 30.05289872143576 18.99856509541045 22 21.697470712954832 21.44218619493286 30.475445998329516 26.384897093782794 23 21.84053284218191 27.069582164350116 31.03591544771165 20.053969545756324 24 24.11003790718095 22.216606343563274 29.179962735313648 24.493393013942132 25 21.09695243398368 29.328164821279422 28.481356948579016 21.093525796157884 26 21.825755466558157 22.427558734713983 30.583385089842157 25.1633007088857 27 23.959694172574046 25.423082689054034 28.028184096117194 22.589039042254726 28 20.870151842888657 23.78879061101236 33.1276636754974 22.21339387060159 29 27.509690960101086 22.97946158953162 26.986272032210394 22.524575418156896 30 22.149572741096097 28.272117876341206 30.021844816139463 19.55646456642323 31 27.90289765061144 23.242670207525755 26.652389009059174 22.20204313280363 32 27.4321632792924 26.271175550939112 26.199644486325575 20.097016683442913 33 21.387359989720085 27.22742166920095 25.965348124986615 25.41987021609235 34 25.853554065919944 23.587903968474933 29.91497654894738 20.643565416657744 35 21.779281691045767 26.55965562289851 25.86126400102799 25.799798685027735 36 26.958002270147556 28.773263658364208 24.52166277600497 19.747071295483263 37 24.584841410918123 27.34178570663697 28.23035572783929 19.843017154605615 38 23.920287837577366 28.615638318377485 24.212194547362557 23.25187929668259 39 26.433940847664534 24.002312980532416 28.952519649626286 20.61122652217677 40 22.330113721542844 25.348767481207034 29.070952819480432 23.250165977769687 41 20.242006296447006 28.59100935900456 28.156040519992292 23.010943824556144 42 21.296125757608205 24.023729466943653 30.453387017325937 24.226757758122204 43 24.861328250487226 25.20163621956182 25.786734628316875 24.15030090163408 44 23.733964405799586 23.296853918146187 28.940954746964216 24.028226929090014 45 21.96046516608485 22.428629559034544 28.16032381727454 27.450581457606066 46 26.074358040819824 25.766817295954425 26.23755166727347 21.921272995952286 47 20.414409012057483 23.418927890690252 35.298010408412395 20.86865268883987 48 23.16899749427109 25.248538324802432 26.958644764739898 24.623819416186578 49 21.07018182596963 23.067269183817704 32.892296489837875 22.970252500374787 50 22.60595806651961 22.68648405542587 30.67676097059516 24.03079690745936 51 22.94519521127364 22.270147559591376 26.59949028762341 28.185166941511575 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 133.0 1 423.0 2 713.0 3 5089.0 4 9465.0 5 6708.5 6 3952.0 7 3560.0 8 3168.0 9 3014.5 10 2861.0 11 2831.0 12 2801.0 13 2620.5 14 2440.0 15 2259.0 16 2078.0 17 1917.5 18 1757.0 19 1633.0 20 1509.0 21 1511.0 22 1513.0 23 1609.5 24 1706.0 25 2103.5 26 2839.5 27 3178.0 28 3631.5 29 4085.0 30 4914.5 31 5744.0 32 6415.0 33 7086.0 34 7849.0 35 8612.0 36 9653.0 37 10694.0 38 11610.0 39 12526.0 40 14027.0 41 15528.0 42 17395.0 43 19262.0 44 21957.5 45 24653.0 46 45037.5 47 65422.0 48 51417.5 49 37413.0 50 36782.0 51 36151.0 52 33133.5 53 30116.0 54 27993.5 55 25871.0 56 24795.5 57 23720.0 58 22400.0 59 21080.0 60 20154.0 61 19228.0 62 17996.0 63 16764.0 64 15188.0 65 13612.0 66 11722.5 67 9833.0 68 8525.5 69 7218.0 70 6011.0 71 4804.0 72 3930.0 73 3056.0 74 2522.0 75 1626.5 76 1265.0 77 957.0 78 649.0 79 494.0 80 339.0 81 265.5 82 192.0 83 150.0 84 108.0 85 85.5 86 63.0 87 45.0 88 27.0 89 22.5 90 18.0 91 14.5 92 11.0 93 11.5 94 12.0 95 7.5 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 466930.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.69816158590429 #Duplication Level Percentage of deduplicated Percentage of total 1 74.85460259730586 25.224624937726638 2 7.080820779768611 4.772212855949428 3 2.878621726186431 2.910127802211752 4 1.933356618460727 2.6060225492826836 5 1.5339983852313865 2.5846462729021757 6 1.286544521758608 2.601251110900892 7 1.1587915976234586 2.733440255077244 8 1.1033687177421336 2.9745197871445153 9 0.9471124541318752 2.872435366742246 >10 7.118702103214888 37.51097007894646 >50 0.06723212330375865 1.5262294497791946 >100 0.030383748031506317 2.0316322935542064 >500 6.464627240746025E-4 0.11502271616948541 >1k 0.003232313620373012 1.8702083680208943 >5k 0.0019393881722238075 5.437001799541698 >10k+ 6.464627240746025E-4 2.229654356050536 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCG 10235 2.19197738419035 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTC 9855 2.11059473582764 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGC 9607 2.0574818495277665 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5496 1.1770500931617158 No Hit GCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTGC 3058 0.6549161544557 No Hit GAATGACTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCT 1714 0.36707857708864283 No Hit GAACTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCT 1411 0.30218662326258755 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTC 1378 0.29511918274687854 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAGGATCATCGTA 1024 0.21930482085109115 No Hit CTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTGCT 528 0.11307904825134389 No Hit CCTGTCTCTTATACACATCTGACGCGAGGATCATCGTATGCCGTCTTCTGC 495 0.10601160773563488 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.14241963463474183 0.0 2 0.0 0.0 0.0 1.1841175336774248 0.0 3 0.0 0.0 0.0 1.425695500396205 0.0 4 0.0 0.0 0.0 1.9928040605658235 0.0 5 0.0 0.0 0.0 5.1131861306834 0.0 6 0.0 0.0 0.0 5.607478637054805 0.0 7 0.0 0.0 0.0 6.394962842396077 0.0 8 0.0 0.0 0.0 7.26854132311053 0.0 9 0.0 0.0 0.0 7.501766860128927 0.0 10 0.0 0.0 0.0 10.422547276893752 0.0 11 0.0 0.0 0.0 11.033987963934637 0.0 12 0.0 0.0 0.0 13.905938791681837 0.0 13 0.0 0.0 0.0 14.218619493285932 0.0 14 0.0 0.0 0.0 14.383954768380699 0.0 15 0.0 0.0 0.0 14.819137772257083 0.0 16 0.0 0.0 0.0 15.227764332983531 0.0 17 0.0 0.0 0.0 15.629751782922494 0.0 18 0.0 0.0 0.0 16.070717238129912 0.0 19 0.0 0.0 0.0 16.36283811277922 0.0 20 0.0 0.0 0.0 16.624975906452786 0.0 21 0.0 0.0 0.0 16.920095089199666 0.0 22 0.0 0.0 0.0 17.25140813398154 0.0 23 0.0 0.0 0.0 17.561518857216285 0.0 24 0.0 0.0 0.0 17.84014734542651 0.0 25 0.0 0.0 0.0 18.07380121217313 0.0 26 0.0 0.0 0.0 18.27682950335168 0.0 27 0.0 0.0 0.0 18.513481678195877 0.0 28 0.0 0.0 0.0 18.73214400445463 0.0 29 0.0 0.0 0.0 18.967297025250037 0.0 30 0.0 0.0 0.0 19.253207118840084 0.0 31 0.0 0.0 0.0 19.490501788276614 0.0 32 0.0 0.0 0.0 19.72072901719744 0.0 33 0.0 0.0 0.0 19.964448632557342 0.0 34 0.0 0.0 0.0 20.21095239115071 0.0 35 0.0 0.0 0.0 20.469235217270256 0.0 36 0.0 0.0 0.0 20.70781487589146 0.0 37 0.0 0.0 0.0 20.94211123723042 0.0 38 0.0 0.0 0.0 21.17747842288994 0.0 39 0.0 0.0 0.0 21.429122138222002 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGGTAC 20 7.0289784E-4 45.0 25 ACGATTG 25 3.8872357E-5 45.0 1 TGATTCG 20 7.0289784E-4 45.0 15 TACGGCT 1135 0.0 43.414097 7 ACGGCTG 1150 0.0 42.847824 8 CGTTTTT 2885 0.0 42.114388 1 CTACGAA 70 0.0 41.785713 11 CGAATAT 65 0.0 41.53846 14 CGAATGG 55 6.002665E-11 40.909092 2 GAATCTG 1390 0.0 40.791367 1 GATACCT 1250 0.0 40.5 5 ATGATAC 3150 0.0 40.5 3 CCTCGAT 50 1.0786607E-9 40.5 15 TGATACC 1260 0.0 40.357143 4 TATGCGG 45 1.924127E-8 40.000004 2 AATGATA 3185 0.0 39.91366 2 ATACGGC 1885 0.0 39.867374 6 GAATGAT 3265 0.0 39.62481 1 CGGACGG 40 3.4523327E-7 39.375 2 AATGACT 250 0.0 38.7 2 >>END_MODULE