##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552263_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 367465 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 24.356776835889132 28.0 16.0 30.0 16.0 31.0 2 25.029926659681873 28.0 16.0 31.0 16.0 33.0 3 26.014583701849155 30.0 19.0 31.0 16.0 33.0 4 27.037437579089165 28.0 19.0 35.0 19.0 35.0 5 29.728725184711468 32.0 28.0 35.0 19.0 35.0 6 29.3887662770604 33.0 28.0 35.0 15.0 35.0 7 30.74225844638265 32.0 28.0 35.0 23.0 35.0 8 31.855227028424476 35.0 32.0 35.0 25.0 37.0 9 32.8849495870355 35.0 32.0 37.0 25.0 39.0 10 32.20052249874138 35.0 29.0 37.0 17.0 39.0 11 33.02853060835726 35.0 31.0 39.0 23.0 39.0 12 33.04056168614698 35.0 31.0 39.0 25.0 39.0 13 33.355729117058765 35.0 32.0 38.0 26.0 39.0 14 33.246861605867224 36.0 31.0 39.0 22.0 41.0 15 33.81331283251466 36.0 32.0 39.0 25.0 41.0 16 33.79414093859279 36.0 32.0 39.0 23.0 41.0 17 31.94769297756249 34.0 27.0 38.0 18.0 41.0 18 32.54655817560856 35.0 30.0 39.0 18.0 39.0 19 32.39725960295539 35.0 30.0 37.0 18.0 39.0 20 32.359816581170996 34.0 30.0 37.0 24.0 39.0 21 33.25204305171921 35.0 32.0 37.0 25.0 39.0 22 33.86806634645477 35.0 32.0 38.0 26.0 39.0 23 34.76066836297334 36.0 33.0 39.0 28.0 40.0 24 32.87046929639558 35.0 31.0 37.0 24.0 39.0 25 32.19364837467514 35.0 30.0 38.0 20.0 39.0 26 31.84569142639435 34.0 28.0 37.0 21.0 39.0 27 33.22942048902617 35.0 31.0 38.0 24.0 39.0 28 33.493138121998015 35.0 32.0 38.0 24.0 40.0 29 33.60557331990802 35.0 32.0 39.0 24.0 40.0 30 32.42238580545086 35.0 30.0 38.0 20.0 40.0 31 32.43819411372512 35.0 30.0 38.0 21.0 40.0 32 32.40945940429701 35.0 30.0 38.0 21.0 40.0 33 32.549157062577386 35.0 31.0 38.0 18.0 40.0 34 31.83549181554706 35.0 30.0 38.0 15.0 40.0 35 31.54346128202686 35.0 30.0 38.0 12.0 40.0 36 31.11004313335964 35.0 30.0 38.0 10.0 40.0 37 31.348920305335202 35.0 30.0 38.0 10.0 40.0 38 31.018363653681302 35.0 29.0 38.0 10.0 40.0 39 30.651332779992654 35.0 29.0 38.0 10.0 40.0 40 30.35337787272257 35.0 27.0 38.0 10.0 40.0 41 30.011165689249317 34.0 25.0 38.0 9.0 40.0 42 30.93029540228321 35.0 29.0 38.0 10.0 40.0 43 31.063301266787313 35.0 29.0 38.0 10.0 40.0 44 31.270912876056222 35.0 30.0 38.0 10.0 40.0 45 31.539520770685645 35.0 30.0 39.0 10.0 40.0 46 31.334655001156573 35.0 30.0 39.0 10.0 40.0 47 31.29160600329283 35.0 30.0 39.0 10.0 40.0 48 31.21686963384268 35.0 30.0 38.0 10.0 40.0 49 31.329261290190903 35.0 30.0 38.0 10.0 40.0 50 31.3934469949519 35.0 30.0 39.0 10.0 40.0 51 29.925010545221994 34.0 27.0 37.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 26.0 10 23.0 11 40.0 12 33.0 13 47.0 14 59.0 15 114.0 16 219.0 17 515.0 18 865.0 19 1418.0 20 2372.0 21 3441.0 22 5090.0 23 7090.0 24 9979.0 25 13162.0 26 15327.0 27 15672.0 28 16156.0 29 18460.0 30 22358.0 31 28429.0 32 35924.0 33 45620.0 34 52012.0 35 44474.0 36 22285.0 37 5736.0 38 504.0 39 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.00480317853401 10.741703291469936 13.456247533778729 36.79724599621733 2 39.13216224674459 25.482699032560923 19.05324316601581 16.331895554678677 3 23.011443266705673 24.471174125426913 38.213163158396036 14.304219449471379 4 20.375001700842258 17.958989291497147 47.20966622671547 14.456342780945125 5 26.0871103370389 19.85413576803233 38.304600438136966 15.754153456791803 6 18.249357081626822 27.638822745023333 39.63234593770835 14.47947423564149 7 51.90480726055543 4.434980202196128 38.771583688242416 4.888628849006028 8 49.63084919652212 12.70297851496061 29.640101778400663 8.02607051011661 9 45.35860558148395 4.939790184099166 31.307199325105795 18.394404909311092 10 28.86506197869185 18.32256133237179 37.14748343379641 15.664893255139944 11 23.06042752370974 18.434952988720013 41.21834732559563 17.28627216197461 12 19.955369899174073 14.312383492305388 45.51671587770264 20.215530730817903 13 19.253534350210224 16.50225191514838 49.63792470031159 14.6062890343298 14 16.78636060577198 21.547358251806294 41.395779189854814 20.27050195256691 15 13.273917243819138 18.646129563359775 51.23399507436083 16.84595811846026 16 14.447362333827712 19.535738097505885 40.79218428966024 25.224715279006166 17 14.921965357244908 19.153933027635283 45.52297497720871 20.401126637911094 18 15.1543684432531 18.535098580817223 44.77732573170234 21.53320724422734 19 15.662444042289742 21.544909038956092 41.27304641258351 21.519600506170654 20 16.965697413359095 19.845699590437185 47.23551902902317 15.953083967180548 21 17.690392282258173 23.71463948947519 41.260800348332495 17.334167879934142 22 14.823724708475638 17.97967153334331 43.85805450859265 23.338549249588397 23 15.974582613310112 23.705659042357777 42.02087273617895 18.298885608153157 24 18.439307144898155 18.26405235872804 40.04109234893119 23.255548147442614 25 14.581524771066631 24.818690215394664 38.89377219599145 21.706012817547247 26 15.645571687099451 17.831358088525437 42.66583212006586 23.857238104309253 27 18.38107030601554 20.42643517069653 40.259344427360425 20.933150095927502 28 15.796606479528663 19.184139986121128 43.833290245329486 21.185963289020723 29 18.269495053950717 16.69329051746425 39.32782713999973 25.709387288585305 30 16.804593634767937 19.68214659899582 43.649327146803095 19.863932619433143 31 21.356319649490427 17.50697345325405 37.66018532377233 23.47652157348319 32 18.424884002558066 23.131726831126773 35.83661028941532 22.606778876899842 33 16.4192508130026 19.65139537098771 36.008599458451826 27.920754357557865 34 19.524852707060536 20.988121317676516 36.669614793245614 22.817411182017334 35 15.270842121018328 24.08855265127291 35.11681384621665 25.523791381492117 36 20.77231845209748 23.248472643653137 32.57425877294436 23.40495013130502 37 16.801600152395466 22.51207598002531 38.528839481311145 22.15748438626808 38 21.087722640251453 24.08392636033364 30.05810077150205 24.770250227912864 39 19.74718680690678 20.607949056372714 35.86654511314003 23.778319023580476 40 18.55632509218565 23.84961833099751 35.10483991672677 22.48921666009008 41 17.53609187269536 26.956853033622252 35.08442980964174 20.422625284040656 42 18.214251697440574 25.35914985100622 35.9462805981522 20.480317853401004 43 20.895051229368782 24.068142544187882 31.29957955179405 23.737226674649285 44 20.20137972323895 20.895867633652184 35.2738356033908 23.62891703971807 45 18.900847699780932 19.515327990420854 33.973575714693915 27.6102485951043 46 22.55616181132897 22.475882056794525 33.638577823738316 21.32937830813819 47 15.81620018233029 20.346427550923217 42.22442953750697 21.61294272923952 48 19.293810294858012 22.35178860571755 33.533261671179574 24.82113942824487 49 17.026655599853047 19.95673057297974 40.29444981154668 22.722164015620535 50 19.606765270161784 18.856217598955002 36.24372389207136 25.29329323881186 51 18.365286489869785 18.763147510647272 34.15889948702598 28.71266651245697 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 71.0 1 334.0 2 597.0 3 11596.0 4 22595.0 5 15750.0 6 8905.0 7 8320.5 8 7736.0 9 7331.0 10 6926.0 11 6567.0 12 6208.0 13 5797.0 14 5386.0 15 4904.5 16 4423.0 17 4097.0 18 3771.0 19 3426.5 20 3082.0 21 2914.0 22 2746.0 23 2608.0 24 2470.0 25 2488.5 26 2508.0 27 2509.0 28 2792.0 29 3075.0 30 3406.0 31 3737.0 32 3959.5 33 4182.0 34 4824.5 35 5467.0 36 5786.0 37 6105.0 38 6413.0 39 6721.0 40 7454.5 41 8188.0 42 9649.0 43 11110.0 44 13725.5 45 16341.0 46 37525.5 47 58710.0 48 45589.5 49 32469.0 50 31428.5 51 30388.0 52 24815.5 53 19243.0 54 16943.0 55 14643.0 56 13409.0 57 12175.0 58 11512.0 59 10849.0 60 10286.5 61 9724.0 62 9116.5 63 8509.0 64 7627.0 65 6745.0 66 5814.0 67 4883.0 68 4265.5 69 3648.0 70 3315.5 71 2983.0 72 2769.5 73 2556.0 74 2283.5 75 1640.5 76 1270.0 77 1014.0 78 758.0 79 626.5 80 495.0 81 394.0 82 293.0 83 219.5 84 146.0 85 103.0 86 60.0 87 41.5 88 23.0 89 18.0 90 13.0 91 10.5 92 8.0 93 5.5 94 3.0 95 2.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 367465.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.61580448252677 #Duplication Level Percentage of deduplicated Percentage of total 1 80.8380411066185 41.72520524509683 2 8.70268186893117 8.983918516407641 3 3.8643334053619887 5.983820325193839 4 2.2470706186008087 4.639374308325193 5 1.4175463262328125 3.6583897009878483 6 0.9241954932988702 2.862185633144812 7 0.5901553028708602 2.1322938509116085 8 0.36886329830244347 1.5231340708767096 9 0.2458934132429025 1.1422787707338133 >10 0.7243680481458706 6.192569325307389 >50 0.04030653062607094 1.378370126225624 >100 0.027945861234075824 2.985312799042092 >500 0.003224522450085672 1.2987580863329375 >1k 0.003224522450085672 3.991975143190368 >5k 0.001074840816695224 4.827485471262732 >10k+ 0.001074840816695224 6.674928626960589 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13500 3.673819275305131 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCG 10563 2.8745594818554148 No Hit GAATCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTC 8798 2.3942416284544104 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGC 8605 2.3417196195556036 No Hit GCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCTGC 4384 1.1930387928101998 No Hit GAACTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCT 3081 0.8384471990529709 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGCCTAATCGTA 2158 0.5872668145265536 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGCCTAAT 1984 0.5399153660892875 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTC 1393 0.3790837222592628 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCT 1391 0.37853945273699535 No Hit CCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCTGC 970 0.26397071829970203 No Hit CTGAATGATACCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGC 927 0.2522689235709523 No Hit CTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCTGCT 860 0.23403589457499352 No Hit CTGAATCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCT 705 0.19185500659926796 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCC 660 0.17960894234825084 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTGCCTAATCGT 560 0.1523954662348795 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTAT 490 0.13334603295551958 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTT 485 0.13198535914985102 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATG 482 0.13116895486644986 No Hit GAATCTTTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTC 415 0.11293592587049107 No Hit GAACTGTCCCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCT 414 0.11266379110935737 No Hit TCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCTGC 411 0.11184738682595621 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCTGCCTAA 375 0.10205053542514254 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.25254105833208607 0.0 2 0.0 0.0 0.0 1.9895772386485788 0.0 3 0.0 0.0 0.0 2.3204931081871742 0.0 4 0.0 0.0 0.0 3.6934129781067586 0.0 5 0.0 0.0 0.0 7.119589620780211 0.0 6 0.0 0.0 0.0 7.952594124610507 0.0 7 0.0 0.0 0.0 9.280339624181895 0.0 8 0.0 0.0 0.0 10.683194317826187 0.0 9 0.0 0.0 0.0 11.215217775842596 0.0 10 0.0 0.0 0.0 15.168519450832052 0.0 11 0.0 0.0 0.0 16.331895554678677 0.0 12 0.0 0.0 0.0 20.23376375981386 0.0 13 0.0 0.0 0.0 20.859945845182533 0.0 14 0.0 0.0 0.0 21.247737879798077 0.0 15 0.0 0.0 0.0 22.20374729566081 0.0 16 0.0 0.0 0.0 22.893064645612508 0.0 17 0.0 0.0 0.0 23.669192984365857 0.0 18 0.0 0.0 0.0 24.482331650633395 0.0 19 0.0 0.0 0.0 25.555086879022493 0.0 20 2.721347611337134E-4 0.0 0.0 26.120855047419482 0.0 21 2.721347611337134E-4 0.0 0.0 26.66975086062618 0.0 22 2.721347611337134E-4 0.0 0.0 27.29402800266692 0.0 23 2.721347611337134E-4 0.0 0.0 27.739240471881676 0.0 24 2.721347611337134E-4 0.0 0.0 28.126216102213817 0.0 25 2.721347611337134E-4 0.0 0.0 28.43862680799532 0.0 26 2.721347611337134E-4 0.0 0.0 28.74777189664322 0.0 27 2.721347611337134E-4 0.0 0.0 29.105356972772917 0.0 28 2.721347611337134E-4 0.0 0.0 29.391914876246716 0.0 29 2.721347611337134E-4 0.0 0.0 29.71085681629543 0.0 30 2.721347611337134E-4 0.0 0.0 30.071979644319867 0.0 31 2.721347611337134E-4 0.0 0.0 30.405344726708666 0.0 32 2.721347611337134E-4 0.0 0.0 30.742519695753337 0.0 33 2.721347611337134E-4 0.0 0.0 31.059556692474114 0.0 34 2.721347611337134E-4 0.0 0.0 31.400269413413522 0.0 35 2.721347611337134E-4 0.0 0.0 31.723021240118108 0.0 36 2.721347611337134E-4 0.0 0.0 32.03733688922755 0.0 37 2.721347611337134E-4 0.0 0.0 32.3590001768876 0.0 38 2.721347611337134E-4 0.0 0.0 32.6471908889282 0.0 39 2.721347611337134E-4 0.0 0.0 32.96858204182711 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCCG 25 3.885609E-5 45.0 4 ACAACTA 25 3.885609E-5 45.0 15 TACGGTG 20 7.027015E-4 45.0 7 CTAACGG 20 7.027015E-4 45.0 2 CGTTTTC 25 3.885609E-5 45.0 1 TGCGTTG 20 7.027015E-4 45.0 1 GTGCCTC 30 2.1614578E-6 44.999996 21 CGTTTTT 6985 0.0 44.291336 1 GTTGATC 105 0.0 40.714287 16 CGAAAGG 45 1.9221261E-8 40.000004 2 ACGGGCT 90 0.0 40.000004 5 TACCTGG 125 0.0 39.600002 10 ACGGGAA 80 0.0 39.375 5 CGTCTTT 120 0.0 39.374996 1 GTTTTTT 8000 0.0 39.009377 2 TAGCATA 105 0.0 38.57143 30 TAGGGTA 105 0.0 38.57143 5 AGTAGCA 105 0.0 38.57143 28 TCGTTCA 35 6.2366944E-6 38.571426 16 CATATTA 70 0.0 38.571426 28 >>END_MODULE