##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552262_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 413668 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.276294032895944 28.0 16.0 30.0 16.0 33.0 2 26.364231702718122 30.0 25.0 31.0 16.0 33.0 3 27.06245829989267 30.0 25.0 31.0 16.0 33.0 4 27.972412659427366 30.0 19.0 35.0 19.0 35.0 5 29.996359399325062 32.0 28.0 35.0 19.0 35.0 6 30.95702350677355 33.0 30.0 35.0 17.0 35.0 7 32.06635030991036 33.0 32.0 35.0 28.0 35.0 8 32.81128827948983 35.0 32.0 35.0 28.0 37.0 9 33.76936335418742 35.0 32.0 37.0 27.0 39.0 10 34.18616861831227 35.0 32.0 39.0 27.0 39.0 11 34.82274916116306 37.0 34.0 39.0 28.0 39.0 12 32.91872226036338 35.0 30.0 37.0 25.0 39.0 13 33.84548720229749 35.0 32.0 37.0 27.0 39.0 14 35.15580127058414 37.0 33.0 39.0 27.0 41.0 15 35.10785219064564 37.0 33.0 39.0 27.0 41.0 16 35.63182068712107 37.0 34.0 40.0 28.0 41.0 17 33.95265043464808 36.0 31.0 39.0 24.0 41.0 18 33.92296479302242 36.0 31.0 39.0 25.0 40.0 19 33.7003007242523 36.0 32.0 38.0 25.0 40.0 20 33.85471199125869 35.0 32.0 38.0 27.0 40.0 21 34.86153872187358 36.0 34.0 39.0 29.0 40.0 22 35.53253575330942 37.0 34.0 39.0 30.0 40.0 23 35.84989411798834 37.0 35.0 39.0 30.0 40.0 24 35.64359824787027 37.0 35.0 39.0 30.0 40.0 25 34.661984973456974 36.0 33.0 39.0 27.0 40.0 26 34.78704178229885 36.0 33.0 39.0 27.0 40.0 27 35.52094433216976 37.0 34.0 39.0 30.0 40.0 28 35.318487289323805 37.0 34.0 40.0 29.0 40.0 29 35.43995909763385 37.0 34.0 40.0 29.0 40.0 30 35.14708413510351 37.0 34.0 40.0 27.0 41.0 31 34.817399460436874 37.0 34.0 40.0 26.0 40.0 32 34.35914066352727 37.0 33.0 39.0 24.0 40.0 33 34.00240289314136 37.0 33.0 40.0 21.0 40.0 34 32.61947745535067 36.0 31.0 39.0 16.0 40.0 35 32.44223145130878 36.0 31.0 39.0 15.0 40.0 36 32.407744858195464 36.0 31.0 39.0 12.0 40.0 37 32.353650753744546 36.0 31.0 39.0 10.0 40.0 38 32.36354516182059 36.0 31.0 39.0 10.0 40.0 39 31.888207451386137 36.0 31.0 39.0 10.0 40.0 40 31.631458077492095 35.0 30.0 39.0 10.0 40.0 41 31.301947455447365 35.0 30.0 39.0 10.0 40.0 42 31.55072666969647 35.0 30.0 39.0 10.0 40.0 43 31.785576839397777 36.0 30.0 39.0 10.0 40.0 44 31.540602608855412 35.0 30.0 39.0 10.0 40.0 45 31.69048125549958 36.0 30.0 39.0 10.0 40.0 46 31.381840026301283 35.0 30.0 39.0 10.0 40.0 47 31.444948606128587 35.0 30.0 39.0 10.0 40.0 48 31.511267489871106 35.0 30.0 39.0 10.0 40.0 49 31.231618109208352 35.0 29.0 38.0 10.0 40.0 50 31.274524497906533 35.0 29.0 38.0 10.0 40.0 51 28.155786766198982 32.0 23.0 36.0 8.0 38.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 10.0 9 7.0 10 17.0 11 15.0 12 19.0 13 32.0 14 65.0 15 94.0 16 177.0 17 421.0 18 845.0 19 1371.0 20 1998.0 21 2721.0 22 3940.0 23 5669.0 24 8502.0 25 12015.0 26 15146.0 27 15583.0 28 14550.0 29 14785.0 30 17289.0 31 21804.0 32 28633.0 33 38155.0 34 51789.0 35 64700.0 36 55018.0 37 30062.0 38 7866.0 39 368.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.77553013527756 10.49779049866076 13.031706585957822 34.69497278010385 2 36.85491747004844 31.01690244350542 18.445951826102092 13.682228260344045 3 22.04666544185192 29.81231325604108 36.27450032393127 11.866520978175735 4 19.830878869044742 17.262635736871115 49.01249311041705 13.893992283667094 5 26.91361188199232 19.401065588829688 36.649922159799644 17.035400369378344 6 17.460378854540355 31.109730508523743 39.55224963013818 11.877641006797722 7 52.30063722598799 4.577825695968748 37.942504617229275 5.179032460813986 8 47.90024850846572 14.028157846388892 30.34486593113318 7.7267277140122035 9 44.20646508794492 5.235841302687179 30.59675875339644 19.960934855971455 10 27.911513580939307 18.012028970091958 37.528404420936596 16.548053028032143 11 22.083651624007658 17.9982498041908 41.048135219548044 18.8699633522535 12 20.46544571975594 14.122678089675777 45.81766053936974 19.594215651198546 13 17.65884719146755 16.46078497732481 51.46494290107042 14.41542493013721 14 16.867632981037932 22.917170291151358 39.757970159644934 20.457226568165776 15 12.800603382422619 18.374396859317134 53.52432385391184 15.300675904348415 16 14.075055358403358 21.22209114555634 39.165466025895164 25.53738747014514 17 14.289720258758232 18.817505825928038 45.60251215950956 21.29026175580417 18 14.714457004167594 20.221530309330188 43.992525406848 21.071487279654217 19 15.197936509471363 22.614270381078548 39.89721225717242 22.29058085227767 20 15.906717464246691 21.635707862343715 46.52982585068219 15.927748822727406 21 16.49656246071729 25.52578396201785 41.037740410184014 16.939913167080846 22 14.070945782608273 18.16142413723082 41.623717570612186 26.143912509548723 23 15.058210932438573 25.35414873763501 42.08858311496176 17.499057214964658 24 19.671572372047148 17.66609938404711 37.83928174284692 24.82304650105882 25 13.953702002572111 28.548256089424367 37.09665722270033 20.40138468530319 26 15.550876548343116 17.578347853834476 41.20985911407216 25.660916483750253 27 19.828944951023526 21.04900548265759 37.56901669938211 21.553032866936768 28 15.40389877873077 18.226935610199483 43.46770840384076 22.901457207228987 29 19.16391889147819 16.371824748348917 36.607617703085566 27.856638657087323 30 16.63145324269704 20.306380962511 43.694218552075576 19.367947242716383 31 23.057621087442104 17.084231799414024 35.66918398329095 24.188963129852926 32 19.1010665557887 22.616446038852413 34.22019590589555 24.06229149946334 33 16.03097169710976 18.903806917624763 34.766769486641465 30.29845189862402 34 19.777937863213978 19.612104392894786 36.69730315131942 23.912654592571823 35 14.888751365829602 24.807091677383795 34.21028457603682 26.093872380749776 36 20.98349400968893 24.26777028921744 31.520446348279297 23.228289352814336 37 16.13105195470764 21.572613786901574 39.459421565119854 22.836912693270932 38 20.42942649661081 23.63223647949563 28.444307995784058 27.494029028109495 39 20.487927516752567 19.665045398725546 35.894243693009855 23.952783391512035 40 17.65691327344634 23.87325101288956 35.45814517922585 23.011690534438245 41 16.341123799762126 29.01771468907433 33.86580542850788 20.775356082655655 42 17.970691472388488 24.61152421748842 37.59609155167912 19.82169275844397 43 21.722734173298395 24.032799249639808 30.190877708693932 24.05358886836787 44 20.57954688300763 19.877776381059206 34.50448185501417 25.038194880918997 45 18.182455495711537 18.28519489058859 33.72293723469062 29.809412379009252 46 24.460678611833643 22.721844571008635 32.233336878849705 20.584139938308017 47 15.18464082307551 19.347882843246275 44.18857634624868 21.278899987429533 48 20.046994207915528 22.052467195915565 32.06847036754112 25.832068228627787 49 16.747971803475252 18.351431582815206 41.75522399605481 23.14537261765474 50 19.727414254909732 17.53386773934653 36.64266996722009 26.096048038523644 51 18.807352756316657 17.64047497026601 32.737122523376236 30.815049750041094 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 95.0 1 350.5 2 606.0 3 11764.0 4 22922.0 5 15971.5 6 9021.0 7 8377.0 8 7733.0 9 7668.0 10 7603.0 11 7166.5 12 6730.0 13 6272.0 14 5814.0 15 5432.0 16 5050.0 17 4646.5 18 4243.0 19 3912.5 20 3582.0 21 3338.0 22 3094.0 23 2965.0 24 2836.0 25 2809.0 26 2814.0 27 2846.0 28 3202.5 29 3559.0 30 3803.5 31 4048.0 32 4341.0 33 4634.0 34 5329.0 35 6024.0 36 6306.5 37 6589.0 38 7237.0 39 7885.0 40 8643.5 41 9402.0 42 11081.0 43 12760.0 44 16036.5 45 19313.0 46 50873.5 47 82434.0 48 58220.0 49 34006.0 50 33232.5 51 32459.0 52 26287.0 53 20115.0 54 17648.0 55 15181.0 56 14188.0 57 13195.0 58 12320.5 59 11446.0 60 10825.0 61 10204.0 62 9460.5 63 8717.0 64 7887.5 65 7058.0 66 6022.5 67 4987.0 68 4390.5 69 3794.0 70 3463.5 71 3133.0 72 2893.5 73 2654.0 74 2302.5 75 1622.5 76 1294.0 77 1022.0 78 750.0 79 628.5 80 507.0 81 400.5 82 294.0 83 231.0 84 168.0 85 121.0 86 74.0 87 55.0 88 36.0 89 27.5 90 19.0 91 15.5 92 12.0 93 10.0 94 8.0 95 4.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 413668.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.19238637857428 #Duplication Level Percentage of deduplicated Percentage of total 1 79.66481799340914 37.595728715237605 2 8.537532532567809 8.058130679931756 3 3.931668523937587 5.566344602824242 4 2.392657482603887 4.516608655625179 5 1.6838118693769468 3.973155016423316 6 1.1507031075685297 3.25826553956401 7 0.7385834790142857 2.4398861840131643 8 0.5099557751277914 1.9252823980652853 9 0.36142859148188305 1.5351009963729214 >10 0.9408921768237065 6.988123514813352 >50 0.05412213420829372 1.763593299755718 >100 0.023938636284437473 1.9870816583099082 >500 0.004683646229563854 1.6007660670947943 >1k 0.00260202568309103 3.2882259699803935 >5k 5.204051366182059E-4 1.2338522125014189 >10k+ 0.0020816205464728238 14.26985448948695 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTC 16093 3.8903178394267863 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCG 15796 3.818521132889177 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14604 3.53036734772813 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGC 11611 2.8068402680410376 No Hit GCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCTGC 5024 1.2145005173230705 No Hit GAACTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCT 4420 1.0684897067213321 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCT 2853 0.6896835143158282 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTC 2550 0.616436369262307 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTGCCTAATCGTA 2193 0.530135277565584 No Hit CTGAATGATACCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGC 1373 0.33190868039103827 No Hit CTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCTGCT 970 0.23448756007232854 No Hit CCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCTGC 968 0.2340040805670248 No Hit CTGAATCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCT 874 0.21128054381774758 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTT 836 0.20209443321697593 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCC 644 0.155680400707814 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTGCCTAATCGT 601 0.14528559134378294 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTAT 590 0.14262645406461222 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATG 526 0.12715510989489157 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTGCCTAAT 509 0.1230455340998095 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2719572217333707 0.0 2 0.0 0.0 0.0 2.0061982072579942 0.0 3 0.0 0.0 0.0 2.3637313014301324 0.0 4 0.0 0.0 0.0 3.929479679356392 0.0 5 0.0 0.0 0.0 9.233733332044055 0.0 6 0.0 0.0 0.0 10.179177504665578 0.0 7 0.0 0.0 0.0 11.883684500614018 0.0 8 0.0 0.0 0.0 13.654428188789078 0.0 9 0.0 0.0 0.0 14.194716535966041 0.0 10 0.0 0.0 0.0 19.255779997485906 0.0 11 0.0 0.0 0.0 20.4475569780597 0.0 12 2.4173975265188508E-4 0.0 0.0 25.008702631095467 0.0 13 2.4173975265188508E-4 0.0 0.0 25.627798137636944 0.0 14 2.4173975265188508E-4 0.0 0.0 26.068489706721333 0.0 15 2.4173975265188508E-4 0.0 0.0 26.968003326338998 0.0 16 2.4173975265188508E-4 0.0 0.0 27.686937350725703 0.0 17 2.4173975265188508E-4 0.0 0.0 28.449868010095052 0.0 18 2.4173975265188508E-4 0.0 0.0 29.30731891275129 0.0 19 2.4173975265188508E-4 0.0 0.0 29.903449142790837 0.0 20 2.4173975265188508E-4 0.0 0.0 30.387412127599912 0.0 21 2.4173975265188508E-4 0.0 0.0 30.893615169652957 0.0 22 2.4173975265188508E-4 0.0 0.0 31.46170358838489 0.0 23 2.4173975265188508E-4 0.0 0.0 31.89901080093215 0.0 24 2.4173975265188508E-4 0.0 0.0 32.28772832319638 0.0 25 2.4173975265188508E-4 0.0 0.0 32.58676039722676 0.0 26 2.4173975265188508E-4 0.0 0.0 32.88071593645145 0.0 27 2.4173975265188508E-4 0.0 0.0 33.20682286277885 0.0 28 2.4173975265188508E-4 0.0 0.0 33.51504104741 0.0 29 2.4173975265188508E-4 0.0 0.0 33.83728013769496 0.0 30 2.4173975265188508E-4 0.0 0.0 34.229382016496324 0.0 31 2.4173975265188508E-4 0.0 0.0 34.5595985186188 0.0 32 2.4173975265188508E-4 0.0 0.0 34.89610025431022 0.0 33 2.4173975265188508E-4 0.0 0.0 35.2147132483054 0.0 34 2.4173975265188508E-4 0.0 0.0 35.512053144067224 0.0 35 2.4173975265188508E-4 0.0 0.0 35.82462264424611 0.0 36 2.4173975265188508E-4 0.0 0.0 36.117852964212844 0.0 37 2.4173975265188508E-4 0.0 0.0 36.42462071032809 0.0 38 2.4173975265188508E-4 0.0 0.0 36.73114671669068 0.0 39 2.4173975265188508E-4 0.0 0.0 37.0541110262336 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGGT 20 7.0280454E-4 45.0 28 CCTCAAG 20 7.0280454E-4 45.0 24 ATGCGAG 25 3.8864622E-5 45.0 1 CGGTCTA 20 7.0280454E-4 45.0 31 ATAACGC 20 7.0280454E-4 45.0 11 ACCCGTC 20 7.0280454E-4 45.0 17 CGTTTTT 7675 0.0 43.97394 1 ACAACGA 55 6.002665E-11 40.909092 13 CCTAGGG 55 6.002665E-11 40.909092 3 CACTAGG 45 1.9232175E-8 40.0 2 TACGGCT 1630 0.0 39.478527 7 CGTATTT 80 0.0 39.375 1 CTACTGG 40 3.4510776E-7 39.375 2 GTTTTTT 8655 0.0 39.33276 2 GAATCTG 1985 0.0 39.332497 1 ACGGCTG 1675 0.0 38.686565 8 CCCGTCT 70 0.0 38.571426 18 CGAATAG 35 6.2385952E-6 38.571426 26 TCGTAAC 35 6.2385952E-6 38.571426 34 GAATGAC 505 0.0 38.316833 1 >>END_MODULE