##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3552131_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 335115 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 25.655219849902274 28.0 16.0 31.0 16.0 33.0 2 26.63556391089626 30.0 25.0 31.0 16.0 33.0 3 26.856046431821913 30.0 25.0 33.0 16.0 33.0 4 29.59344702564791 32.0 28.0 35.0 19.0 37.0 5 32.143311997374035 33.0 32.0 35.0 28.0 37.0 6 30.885758620175164 35.0 30.0 35.0 17.0 37.0 7 33.07805977052654 35.0 32.0 35.0 28.0 37.0 8 33.24087253629351 35.0 33.0 37.0 28.0 37.0 9 35.12249526282022 37.0 34.0 39.0 30.0 39.0 10 35.17906987153663 37.0 34.0 39.0 30.0 39.0 11 35.369586559837664 37.0 34.0 39.0 30.0 39.0 12 35.25086015248497 37.0 34.0 39.0 28.0 39.0 13 35.41464273458365 37.0 34.0 39.0 30.0 39.0 14 35.7532071080077 38.0 34.0 40.0 27.0 41.0 15 36.33898810855975 38.0 34.0 40.0 30.0 41.0 16 36.091070229622666 38.0 34.0 40.0 29.0 41.0 17 35.630804350745265 37.0 34.0 40.0 27.0 41.0 18 35.468483953269775 38.0 34.0 39.0 27.0 40.0 19 34.758420243796905 37.0 33.0 39.0 27.0 40.0 20 34.78381749548662 35.0 34.0 39.0 29.0 40.0 21 35.29642958387419 36.0 34.0 39.0 30.0 40.0 22 35.86342897214389 37.0 34.0 39.0 31.0 40.0 23 36.27773450904913 37.0 35.0 40.0 31.0 41.0 24 36.219035256553724 37.0 35.0 40.0 31.0 41.0 25 34.609701147367325 35.0 33.0 39.0 26.0 40.0 26 35.060961162585976 36.0 33.0 39.0 28.0 40.0 27 35.599230115035134 37.0 35.0 39.0 30.0 40.0 28 35.51789385733256 37.0 35.0 40.0 30.0 41.0 29 35.63005237008191 37.0 35.0 40.0 30.0 41.0 30 34.703653969532844 36.0 34.0 40.0 25.0 41.0 31 34.742446622801125 36.0 34.0 39.0 27.0 41.0 32 34.29872730256778 37.0 33.0 40.0 23.0 40.0 33 34.001915760261404 37.0 33.0 40.0 20.0 41.0 34 33.73374214821778 38.0 33.0 40.0 15.0 41.0 35 33.352410366590576 37.0 33.0 40.0 14.0 41.0 36 33.113543112066004 37.0 33.0 40.0 11.0 41.0 37 33.10742282500037 38.0 33.0 40.0 10.0 41.0 38 32.919588797875356 37.0 33.0 40.0 10.0 41.0 39 32.76177730032974 37.0 33.0 40.0 10.0 41.0 40 32.532470942810676 36.0 31.0 40.0 10.0 41.0 41 32.208588096623544 36.0 31.0 40.0 10.0 41.0 42 32.519663399131645 37.0 32.0 40.0 10.0 41.0 43 32.54835205824866 37.0 32.0 40.0 10.0 41.0 44 32.67070408665682 37.0 33.0 40.0 10.0 41.0 45 32.705918863673666 37.0 33.0 40.0 10.0 41.0 46 32.51718066932247 37.0 32.0 40.0 10.0 41.0 47 32.37319726064187 36.0 31.0 40.0 10.0 41.0 48 32.43022246094624 36.0 32.0 40.0 10.0 41.0 49 32.49457947271832 36.0 32.0 40.0 10.0 41.0 50 32.39959416916581 36.0 32.0 40.0 10.0 41.0 51 31.381457111737763 35.0 29.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 14.0 10 14.0 11 12.0 12 10.0 13 14.0 14 25.0 15 35.0 16 82.0 17 148.0 18 360.0 19 662.0 20 1258.0 21 2038.0 22 2857.0 23 4038.0 24 5508.0 25 8715.0 26 11160.0 27 11615.0 28 11075.0 29 10767.0 30 11889.0 31 14789.0 32 18891.0 33 23958.0 34 28559.0 35 43048.0 36 49469.0 37 47924.0 38 23965.0 39 2212.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.53857630962505 12.088089163421511 16.13595332945407 30.237381197499364 2 40.6191904271668 26.190412246542234 18.051116780806588 15.139280545484384 3 22.4505020664548 25.862763528937826 38.065141816988195 13.621592587619174 4 20.429404831177354 17.337630365695357 47.902958685824274 14.330006117303014 5 26.16474941438014 20.5472748161079 37.418498127508464 15.86947764200349 6 18.34922340092207 30.64112319651463 38.269549259209526 12.740104143353776 7 56.78946033451203 4.091729704728228 35.59822747415066 3.5205824866090745 8 55.18284767915491 11.301791922175969 27.972188651656893 5.543171747012219 9 50.88820255733106 5.042149709801113 28.264327171269564 15.805320561598258 10 31.99588201065306 18.929621174820586 34.796711576622954 14.277785237903407 11 26.680990107873413 17.83089387225281 39.681601838174956 15.80651418169882 12 20.730793906569385 16.22756367217224 43.45373976097757 19.587902660280797 13 20.035211792966592 18.011428912462886 47.9545827551736 13.998776539396923 14 16.729480924458766 23.880160541903525 41.44517553675604 17.945182996881666 15 14.506960297211405 18.623457619026304 50.101308506035245 16.76827357772705 16 16.882264297330767 20.035510197991734 41.3860913417782 21.696134162899302 17 16.95984960386733 20.46461662414395 43.74796711576623 18.82756665622249 18 18.363546842128823 18.519612670277365 43.48208823836593 19.634752249227876 19 16.753651731495157 21.666293660385243 40.102054518598095 21.478000089521508 20 19.816182504513378 20.77585306536562 44.92845739522254 14.479507034898468 21 18.599286811989916 24.913537143965506 41.15661787744506 15.330558166599525 22 16.30425376363338 17.9806931948734 44.17349268161676 21.54156035987646 23 17.528311176760216 23.276188771018905 42.53435387851931 16.661146173701567 24 19.574474434149472 19.442281008012174 40.59710845530638 20.386136102531964 25 15.32906614147382 25.33190098921266 39.45242677886696 19.886606090446563 26 15.576742312340539 18.394282559718306 43.95535860823897 22.073616519702192 27 18.849648628082896 21.186756784984258 39.62013040299598 20.343464183936856 28 13.645763394655566 21.77192903928502 45.18538412186861 19.3969234441908 29 17.878340271250167 18.74222281903227 41.77371946943587 21.605717440281694 30 16.01778493949838 24.40415976605046 42.1610491920684 17.417006102382764 31 18.829357086373335 18.921564239141787 41.71015919908091 20.538919475403965 32 20.076391686435997 21.954254509645942 39.83140116079555 18.13795264312251 33 18.14720319890187 20.044462348745952 36.534324038016806 25.27401041433538 34 17.823732151649434 20.319293376900465 40.17068767438043 21.686286797069663 35 17.279142980767794 24.485027527863572 34.43146382585083 23.804365665517807 36 19.94867433567581 24.470107276606537 34.88802351431598 20.69319487340167 37 17.94577980693195 24.884591856526864 38.45306834967101 18.71655998687018 38 18.63479700998165 23.79093743938648 33.70126672933172 23.87299882130015 39 20.97518762215956 21.31656297092043 37.54502185816809 20.163227548751923 40 19.4240783014786 20.757053548781762 34.857287796726496 24.961580353013144 41 20.079972546737686 23.631589155961386 34.269131492174324 22.019306805126597 42 19.089267863270816 21.36371096489265 36.601763573698584 22.945257598137953 43 23.38898587052206 20.84388941109768 32.02124643779001 23.745878280590247 44 20.003282455276548 21.81430255285499 34.715545409784696 23.466869582083763 45 18.532444086358417 20.288259254285844 35.086462856034494 26.09283380332125 46 22.624770601136923 23.346313951926952 33.56967011324471 20.45924533369142 47 16.614296584754488 21.749250257374335 40.83046118496635 20.805991972904824 48 19.591185115557348 21.99125673276338 35.01424883995046 23.40330931172881 49 19.187443116542084 19.195201647195738 39.4637661698223 22.15358906643988 50 19.403786759769034 19.386180863285738 36.733658594810734 24.47637378213449 51 18.173462841114244 19.877952344717485 34.30464169016606 27.643943124002206 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 89.0 1 387.5 2 686.0 3 11459.0 4 22232.0 5 14320.0 6 6408.0 7 5952.0 8 5496.0 9 5361.0 10 5226.0 11 5020.0 12 4814.0 13 4628.5 14 4443.0 15 4179.5 16 3916.0 17 3601.5 18 3287.0 19 3093.0 20 2899.0 21 2757.5 22 2616.0 23 2540.0 24 2464.0 25 2500.5 26 2687.5 27 2838.0 28 3199.0 29 3560.0 30 3792.5 31 4025.0 32 4533.0 33 5041.0 34 5483.5 35 5926.0 36 6588.0 37 7250.0 38 7798.0 39 8346.0 40 8827.5 41 9309.0 42 10930.0 43 12551.0 44 14127.5 45 15704.0 46 32454.5 47 49205.0 48 37944.0 49 26683.0 50 26364.5 51 26046.0 52 22561.0 53 19076.0 54 17532.0 55 15988.0 56 14817.0 57 13646.0 58 12466.0 59 11286.0 60 10449.5 61 9613.0 62 8434.0 63 7255.0 64 6424.0 65 5593.0 66 4717.0 67 3841.0 68 2984.5 69 2128.0 70 1765.0 71 1402.0 72 1135.5 73 869.0 74 665.5 75 335.5 76 209.0 77 146.5 78 84.0 79 55.5 80 27.0 81 21.5 82 16.0 83 12.0 84 8.0 85 7.5 86 7.0 87 5.5 88 4.0 89 2.5 90 1.0 91 1.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 335115.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.190043156776085 #Duplication Level Percentage of deduplicated Percentage of total 1 78.49159957370253 34.685471726063014 2 8.17337134672501 7.223632650962706 3 3.354540590613154 4.447118804110571 4 2.087194983345746 3.6893294556262015 5 1.6206911398247301 3.580920570632972 6 1.25554127960037 3.3289453998392524 7 0.9456449927029589 2.9251665126973068 8 0.810769699542605 2.8662358410395274 9 0.644464250831804 2.563101275153111 >10 2.5263698111348574 16.749549492744034 >50 0.055792509257945586 1.5845176555474696 >100 0.02585506526587722 2.102267067853493 >500 0.00136079290873038 0.4419812056270931 >1k 0.00408237872619114 3.1314518752422957 >5k 0.00204118936309557 6.734049702333336 >10k+ 6.8039645436519E-4 3.946260764527617 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13125 3.916565954970682 No Hit GAATCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTC 8029 2.395893946854065 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCG 8004 2.38843382122555 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGC 6364 1.899049579994927 No Hit GCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 2782 0.8301627799412141 No Hit GAACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCT 1788 0.5335481849514345 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCATTCTCGT 1739 0.518926338719544 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTA 1686 0.503110872387091 No Hit GAATGACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCT 1222 0.36465094072184173 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTC 1198 0.3574892201184668 No Hit GAATGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTT 874 0.2608059919729048 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCC 596 0.17784939498381153 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATG 482 0.14383122211778046 No Hit CTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGCT 426 0.12712054070990556 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCATTCTCGTCGT 421 0.12562851558420243 No Hit CCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 415 0.1238380854333587 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCATTCTCG 371 0.11070826432717128 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13338704623785866 0.0 2 0.0 0.0 0.0 1.2327111588559152 0.0 3 0.0 0.0 0.0 1.4359249809766796 0.0 4 0.0 0.0 0.0 2.2550467749876906 0.0 5 0.0 0.0 0.0 5.45723109977172 0.0 6 0.0 0.0 0.0 6.15132118824881 0.0 7 0.0 0.0 0.0 6.98416961341629 0.0 8 2.984050251406234E-4 0.0 0.0 7.996061053668144 0.0 9 2.984050251406234E-4 0.0 0.0 8.275964967250049 0.0 10 2.984050251406234E-4 0.0 0.0 11.453381674947407 0.0 11 2.984050251406234E-4 0.0 0.0 12.430658132282948 0.0 12 2.984050251406234E-4 0.0 0.0 15.220148307297494 0.0 13 2.984050251406234E-4 0.0 0.0 15.726541634961134 0.0 14 2.984050251406234E-4 0.0 0.0 15.949151783716038 0.0 15 2.984050251406234E-4 0.0 0.0 16.750966086268892 0.0 16 2.984050251406234E-4 0.0 0.0 17.32330692448861 0.0 17 2.984050251406234E-4 0.0 0.0 17.938916491353716 0.0 18 2.984050251406234E-4 0.0 0.0 18.63986989540904 0.0 19 2.984050251406234E-4 0.0 0.0 19.595661190934454 0.0 20 2.984050251406234E-4 0.0 0.0 20.108321024126045 0.0 21 2.984050251406234E-4 0.0 0.0 20.56965519299345 0.0 22 2.984050251406234E-4 0.0 0.0 21.080823001059336 0.0 23 2.984050251406234E-4 0.0 0.0 21.53678587947421 0.0 24 2.984050251406234E-4 0.0 0.0 21.90173522522119 0.0 25 2.984050251406234E-4 0.0 0.0 22.22460946242335 0.0 26 2.984050251406234E-4 0.0 0.0 22.604479059427362 0.0 27 2.984050251406234E-4 0.0 0.0 22.980767796129687 0.0 28 2.984050251406234E-4 0.0 0.0 23.31169896901064 0.0 29 2.984050251406234E-4 0.0 0.0 23.6375572564642 0.0 30 2.984050251406234E-4 0.0 0.0 24.00161138713576 0.0 31 2.984050251406234E-4 0.0 0.0 24.36059263237993 0.0 32 2.984050251406234E-4 0.0 0.0 24.718678662548676 0.0 33 2.984050251406234E-4 0.0 0.0 25.101830714829237 0.0 34 2.984050251406234E-4 0.0 0.0 25.459021529922563 0.0 35 2.984050251406234E-4 0.0 0.0 25.808453814362235 0.0 36 2.984050251406234E-4 0.0 0.0 26.15579726362592 0.0 37 2.984050251406234E-4 0.0 0.0 26.485236411381166 0.0 38 2.984050251406234E-4 0.0 0.0 26.868090058636586 0.0 39 2.984050251406234E-4 0.0 0.0 27.254524566193695 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTTC 30 2.160883E-6 45.000004 6 GGGTGCG 20 7.026127E-4 45.0 7 AGCCGGA 20 7.026127E-4 45.0 21 ACAGTCC 20 7.026127E-4 45.0 39 TACGGGT 20 7.026127E-4 45.0 4 TCGATAG 20 7.026127E-4 45.0 1 AGCGGGT 35 1.208482E-7 45.0 4 CTACGAA 25 3.884871E-5 45.0 11 TACAAGG 20 7.026127E-4 45.0 2 CGTTTTT 6685 0.0 43.95662 1 CGATGAA 440 0.0 42.954544 19 CCGATGA 490 0.0 41.785713 18 ACGGGCG 60 3.6379788E-12 41.250004 5 GGCGAAC 60 3.6379788E-12 41.250004 32 TACGGCT 710 0.0 41.197186 7 GCGAACA 50 1.0768417E-9 40.5 33 CGACAGG 50 1.0768417E-9 40.5 2 CACAACG 150 0.0 40.5 12 ACGGCTG 720 0.0 40.3125 8 CGGCGAT 45 1.9212166E-8 40.0 31 >>END_MODULE