SRR3551979_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551979_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	390585
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7798	1.9964924408259408	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCG	7391	1.8922897704724964	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGC	7039	1.8021685420587068	No Hit
GAATCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTC	5989	1.5333410141198458	No Hit
GCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGC	2157	0.5522485502515457	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACAGTCAGT	1684	0.431148149570516	No Hit
GAATGACTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCT	1460	0.37379827694355905	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACAGTCAGTCGTA	1405	0.3597168350039044	No Hit
GAACTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCT	1141	0.2921259136935622	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTC	1036	0.26524316089967614	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCC	729	0.18664311225469488	No Hit
CTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGCT	633	0.16206459541457044	No Hit
CCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATGCCGTCTTCTGC	581	0.14875123212616972	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCACAGTCAGTCGTATG	462	0.1182841122930988	No Hit
CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA	444	0.11367564038557548	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAAGTTA	20	7.02756E-4	45.000004	42
TAGGTCG	20	7.02756E-4	45.000004	2
AACTTCG	20	7.02756E-4	45.000004	11
TTAGACG	20	7.02756E-4	45.000004	1
CGTCTCA	20	7.02756E-4	45.000004	31
CCCGTCG	35	1.2091732E-7	45.000004	40
ATATCAG	20	7.02756E-4	45.000004	1
CGTGTCG	20	7.02756E-4	45.000004	29
CGTCGAA	20	7.02756E-4	45.000004	42
CAAGACG	20	7.02756E-4	45.000004	38
CGATGCG	20	7.02756E-4	45.000004	10
CCTGCGT	20	7.02756E-4	45.000004	45
GCGTCGC	20	7.02756E-4	45.000004	26
TGGCTAG	20	7.02756E-4	45.000004	1
AGTCGAT	20	7.02756E-4	45.000004	20
AAGTCGA	20	7.02756E-4	45.000004	19
CATGCGG	25	3.8860606E-5	45.0	2
ATAGCGG	25	3.8860606E-5	45.0	2
CCGTCGA	25	3.8860606E-5	45.0	41
ACCTATG	25	3.8860606E-5	45.0	34