##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551975_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 640738 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27603170094485 33.0 31.0 34.0 30.0 34.0 2 32.39061987895208 34.0 31.0 34.0 30.0 34.0 3 32.35227659355306 34.0 31.0 34.0 30.0 34.0 4 35.94016431052942 37.0 35.0 37.0 35.0 37.0 5 35.994720150826076 37.0 35.0 37.0 35.0 37.0 6 35.97232097987009 37.0 35.0 37.0 35.0 37.0 7 36.13435912962865 37.0 36.0 37.0 35.0 37.0 8 35.94402860451542 37.0 35.0 37.0 35.0 37.0 9 37.85049583449085 39.0 38.0 39.0 35.0 39.0 10 37.6100496614841 39.0 37.0 39.0 35.0 39.0 11 37.58913003442905 39.0 37.0 39.0 35.0 39.0 12 37.54012248376091 39.0 37.0 39.0 35.0 39.0 13 37.51894534115348 39.0 37.0 39.0 35.0 39.0 14 38.84143596914807 40.0 38.0 41.0 35.0 41.0 15 38.85302416900512 40.0 38.0 41.0 35.0 41.0 16 38.857671934550474 40.0 38.0 41.0 35.0 41.0 17 38.786844232744116 40.0 38.0 41.0 35.0 41.0 18 38.59264941364489 40.0 38.0 41.0 35.0 41.0 19 38.41673663806423 40.0 37.0 41.0 35.0 41.0 20 38.19077064260275 40.0 36.0 41.0 34.0 41.0 21 38.11708217711451 40.0 36.0 41.0 34.0 41.0 22 38.1318417200166 40.0 36.0 41.0 34.0 41.0 23 38.09386207779155 40.0 36.0 41.0 34.0 41.0 24 38.01895938745634 40.0 35.0 41.0 34.0 41.0 25 37.855786608566994 40.0 35.0 41.0 34.0 41.0 26 37.85275572855051 40.0 35.0 41.0 34.0 41.0 27 37.841941636050926 40.0 35.0 41.0 34.0 41.0 28 37.738471887105185 40.0 35.0 41.0 34.0 41.0 29 37.645408887876165 40.0 35.0 41.0 33.0 41.0 30 37.44956128714077 40.0 35.0 41.0 33.0 41.0 31 37.34236146443632 40.0 35.0 41.0 33.0 41.0 32 37.05396277417603 40.0 35.0 41.0 32.0 41.0 33 36.77620962078104 40.0 35.0 41.0 31.0 41.0 34 36.50135624857586 40.0 35.0 41.0 30.0 41.0 35 36.32626752276281 40.0 35.0 41.0 30.0 41.0 36 36.21030124637527 40.0 35.0 41.0 29.0 41.0 37 36.16197103964491 39.0 35.0 41.0 29.0 41.0 38 36.06241864849596 39.0 35.0 41.0 28.0 41.0 39 35.96959287571519 39.0 35.0 41.0 28.0 41.0 40 35.89746042844345 39.0 35.0 41.0 27.0 41.0 41 35.757851102946915 39.0 35.0 41.0 26.0 41.0 42 35.66333665242267 39.0 35.0 41.0 26.0 41.0 43 35.550596343591295 39.0 35.0 41.0 25.0 41.0 44 35.583558334295766 39.0 35.0 41.0 26.0 41.0 45 35.550001716770346 39.0 35.0 41.0 26.0 41.0 46 35.49581732314925 39.0 35.0 41.0 26.0 41.0 47 35.427363446525725 38.0 35.0 41.0 26.0 41.0 48 35.38308637851977 38.0 35.0 41.0 26.0 41.0 49 35.34639119265597 38.0 35.0 41.0 26.0 41.0 50 35.24878655550319 38.0 35.0 40.0 26.0 41.0 51 34.4763475866891 37.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 7.0 10 9.0 11 8.0 12 12.0 13 12.0 14 25.0 15 25.0 16 57.0 17 110.0 18 205.0 19 386.0 20 657.0 21 1094.0 22 1595.0 23 2347.0 24 3786.0 25 5887.0 26 9132.0 27 11495.0 28 11385.0 29 10102.0 30 10018.0 31 11152.0 32 13302.0 33 17716.0 34 30850.0 35 45331.0 36 48111.0 37 65395.0 38 114317.0 39 225953.0 40 253.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.002778046565055 18.317627485805428 21.352877463175275 20.32671700445424 2 37.61240944036408 25.071714179586664 21.47398780780912 15.841888572240133 3 29.155910840312266 24.44509300213192 30.945253754264613 15.453742403291205 4 26.309037391258205 22.37482403103921 33.75279755531903 17.563341022383565 5 25.171286859839746 26.224759574116096 29.533444247102558 19.070509318941596 6 23.515695963092558 33.305656914370616 28.89340104691777 14.285246075619051 7 70.79836064038656 5.850753350043232 18.69828229323062 4.652603716339596 8 70.5929724786106 7.464829618346344 16.69481129572462 5.247386607318436 9 64.20424572914358 7.647431555487579 18.5545417939938 9.59378092137504 10 35.64342991987365 23.47402526461674 24.765660847335415 16.1168839681742 11 27.680268690166653 21.801890944504617 30.68321217096536 19.834628194363376 12 23.644609809313636 19.561817778873735 35.545417939938005 21.24815447187462 13 22.39839060583265 20.17860654432857 38.10231327001052 19.320689579828258 14 19.841339205728396 24.277785928101657 35.01758909257762 20.863285773592327 15 18.957046405863238 22.76671588075001 38.068602143153676 20.207635570233077 16 20.90776573263955 22.567258380180355 34.802992798928734 21.72198308825136 17 20.87280604552875 23.417683983156923 33.362466405925666 22.34704356538866 18 21.3274380480009 23.049826918334794 33.30924652510075 22.313488508563562 19 22.075793850216467 24.31477452562514 31.58451660429068 22.024915019867716 20 22.959150229891158 23.96564586461237 32.574000605551724 20.501203299944752 21 22.45691686773689 25.25540860695011 32.27621898498294 20.011455540330054 22 21.238322059874708 22.394957065134268 32.55027796072654 23.81644291426449 23 21.74211612234642 24.205993713499122 32.52421426542519 21.527675898729278 24 21.88101845059915 23.79428096975675 31.892910987018098 22.431789592626004 25 21.762093086409735 25.55615555812204 30.830230140868807 21.851521214599416 26 20.743267919180695 24.333815069497984 31.964859271652372 22.958057739668945 27 23.153145279349747 22.903901438653556 31.56688069070353 22.376072591293163 28 20.84393308965599 24.23658343972107 32.425421935330824 22.49406153529212 29 22.018828288629674 24.3887517206721 30.698350964044586 22.89406902665364 30 20.81708904419591 24.708539215716876 32.03587113609619 22.438500603991024 31 22.20860944723116 23.678789146265714 28.916343341584234 25.19625806491889 32 22.084845912057656 24.66265462638395 29.0221588231071 24.23034063845129 33 20.735464417593462 24.35878627457713 28.64134794565017 26.264401362179235 34 20.055155149218557 26.145944208085055 28.360109748446323 25.43879089425007 35 20.93991615917895 24.672487038383863 28.6973770870465 25.69021971539069 36 20.641042048387952 26.51957586408173 28.363543289144705 24.475838798385613 37 20.3919542777235 26.02358530319725 29.616473503990708 23.967986915088538 38 20.162063120963637 25.52494155177311 27.76111296661038 26.551882360652872 39 21.67531814875971 24.795470223398645 28.902765248822455 24.626446379019193 40 21.053847282352535 23.97438578639007 30.95789542683593 24.013871504421463 41 19.355337126875572 26.03404199532414 30.31332619573055 24.29729468206974 42 20.320005993089218 25.37168078059987 30.708183376044502 23.60012985026641 43 21.94422681345573 23.155018119730684 30.695541703473182 24.2052133633404 44 22.104822876120974 23.710159222646386 29.59134622887982 24.59367167235282 45 21.447299832380786 23.06683855179496 29.546241989705617 25.93961962611863 46 22.925439103034314 24.36050304492632 29.32118900392984 23.392868848109526 47 20.820210444830806 24.339745730704283 31.96189394104923 22.878149883415684 48 20.631521776451528 24.14855994181709 30.364361096111047 24.85555718562033 49 20.51899528356364 23.361654841760597 32.39732932961679 23.722020545058978 50 20.10603397956731 22.634212423798807 32.63190258732899 24.627851009304898 51 20.60826734172158 22.87799381338394 30.472829768173575 26.040909076720908 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 377.0 1 760.0 2 1143.0 3 11531.0 4 21919.0 5 13883.5 6 5848.0 7 5629.5 8 5411.0 9 5278.5 10 5146.0 11 4967.0 12 4788.0 13 4677.5 14 4567.0 15 4238.0 16 3909.0 17 3633.5 18 3358.0 19 3223.5 20 3089.0 21 3103.0 22 3117.0 23 3024.0 24 2931.0 25 3585.5 26 4818.5 27 5397.0 28 6248.0 29 7099.0 30 7976.5 31 8854.0 32 9582.0 33 10310.0 34 11005.5 35 11701.0 36 12982.5 37 14264.0 38 15049.5 39 15835.0 40 18320.0 41 20805.0 42 22759.5 43 24714.0 44 28701.5 45 32689.0 46 46903.5 47 61118.0 48 57898.5 49 54679.0 50 53394.0 51 52109.0 52 46315.0 53 40521.0 54 37102.5 55 33684.0 56 32927.0 57 32170.0 58 30832.0 59 29494.0 60 28414.5 61 27335.0 62 25257.0 63 23179.0 64 21492.0 65 19805.0 66 17027.0 67 14249.0 68 12199.5 69 10150.0 70 8872.5 71 7595.0 72 6343.5 73 5092.0 74 4314.5 75 2760.0 76 1983.0 77 1631.5 78 1280.0 79 993.5 80 707.0 81 529.0 82 351.0 83 236.5 84 122.0 85 85.0 86 48.0 87 28.5 88 9.0 89 7.5 90 6.0 91 4.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 640738.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.26545586509523 #Duplication Level Percentage of deduplicated Percentage of total 1 70.65090970661225 24.91536538087362 2 7.979570157663899 5.628063584350543 3 3.845403695647811 4.068297429370258 4 2.7143307904674208 3.8288845077799145 5 2.235265389002241 3.9413826461316726 6 1.8956017688755897 4.0109556310847125 7 1.692826885068218 4.1788818261833915 8 1.5086811632043264 4.256346318038616 9 1.2897894194948312 4.093651066361558 >10 6.075436955109188 30.03513054882148 >50 0.06143413296718927 1.5010095910246217 >100 0.03962056398200819 2.5434427746814663 >500 0.007567972895439765 1.82410108011999 >1k 0.002671049257214035 1.9481255102167965 >5k 4.4517487620233915E-4 0.855925560617453 >10k+ 4.4517487620233915E-4 2.3704365443438964 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15099 2.3565014093123864 No Hit GAATCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTC 5452 0.8508938130718016 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCG 3808 0.5943146808836062 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGC 2810 0.4385567892024509 No Hit GCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGC 1865 0.29107060920376193 No Hit GAACTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCT 1654 0.25813983250564193 No Hit CGTTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTT 1213 0.18931294850625374 No Hit CGTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTC 1059 0.1652781636175785 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCC 978 0.15263649104626228 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 930 0.14514512952251934 No Hit GAATGACTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCT 924 0.1442087093320515 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCT 799 0.12469995536397094 No Hit CCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGC 732 0.11424326323707976 No Hit CTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGCT 706 0.11018544241171899 No Hit GAATGATCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTC 701 0.10940509225299576 No Hit CGCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTG 642 0.10019696038006175 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.6821009523393336E-4 0.0 0.0 0.11533575345929226 0.0 2 4.6821009523393336E-4 0.0 0.0 0.6122627345342402 0.0 3 4.6821009523393336E-4 0.0 0.0 0.9184721368172326 0.0 4 4.6821009523393336E-4 0.0 0.0 1.5564864265893392 0.0 5 4.6821009523393336E-4 0.0 0.0 3.429170737493328 0.0 6 6.242801269785778E-4 0.0 0.0 4.7791765120845024 0.0 7 6.242801269785778E-4 0.0 0.0 5.7990941695357545 0.0 8 6.242801269785778E-4 0.0 0.0 7.098377183809919 0.0 9 6.242801269785778E-4 0.0 0.0 7.832218473073238 0.0 10 6.242801269785778E-4 0.0 0.0 9.416329295281379 0.0 11 6.242801269785778E-4 0.0 0.0 10.406593646701149 0.0 12 6.242801269785778E-4 0.0 0.0 11.623315614182395 0.0 13 6.242801269785778E-4 0.0 0.0 12.027224856337536 0.0 14 6.242801269785778E-4 0.0 0.0 12.229179477415105 0.0 15 6.242801269785778E-4 0.0 0.0 12.539602770555204 0.0 16 6.242801269785778E-4 0.0 0.0 12.911049446107457 0.0 17 6.242801269785778E-4 0.0 0.0 13.334779582294168 0.0 18 6.242801269785778E-4 0.0 0.0 13.819220960829544 0.0 19 6.242801269785778E-4 0.0 0.0 14.175840983366056 0.0 20 6.242801269785778E-4 0.0 0.0 14.485639996379176 0.0 21 6.242801269785778E-4 0.0 0.0 14.806988191741398 0.0 22 6.242801269785778E-4 0.0 0.0 15.167509965071527 0.0 23 6.242801269785778E-4 0.0 0.0 15.508991194528809 0.0 24 7.803501587232222E-4 0.0 0.0 15.793350792367551 0.0 25 7.803501587232222E-4 0.0 0.0 16.065224787666722 0.0 26 7.803501587232222E-4 0.0 0.0 16.321023569696194 0.0 27 7.803501587232222E-4 0.0 0.0 16.603978537249233 0.0 28 7.803501587232222E-4 0.0 0.0 16.87132650162781 0.0 29 7.803501587232222E-4 0.0 0.0 17.152720768863404 0.0 30 7.803501587232222E-4 0.0 0.0 17.49061238759056 0.0 31 7.803501587232222E-4 0.0 0.0 17.788862218254575 0.0 32 7.803501587232222E-4 0.0 0.0 18.071505045744125 0.0 33 7.803501587232222E-4 0.0 0.0 18.338540870059212 0.0 34 7.803501587232222E-4 0.0 0.0 18.599333893104514 0.0 35 7.803501587232222E-4 0.0 0.0 18.895398743324105 0.0 36 7.803501587232222E-4 0.0 0.0 19.18662542255961 0.0 37 9.364201904678667E-4 0.0 0.0 19.478788521985585 0.0 38 9.364201904678667E-4 0.0 0.0 19.767049870617942 0.0 39 9.364201904678667E-4 0.0 0.0 20.061554020520088 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCTACGA 40 6.8066583E-9 45.000004 10 TGTAACG 20 7.030946E-4 45.000004 1 TTAACGG 25 3.8888662E-5 45.0 2 CGTTTTT 6100 0.0 43.30328 1 CATACGA 90 0.0 40.0 18 TATACGG 65 9.094947E-12 38.076927 2 ATAGGGA 375 0.0 37.8 4 GTTTTTT 7160 0.0 37.64665 2 ATGTGCG 30 1.13935814E-4 37.499996 1 ATCGAGG 60 1.546141E-10 37.499996 2 TCGGCGT 115 0.0 37.173912 4 TACGGGT 55 2.744855E-9 36.818184 4 GGTATGC 55 2.744855E-9 36.818184 8 CAAGCGG 55 2.744855E-9 36.818184 2 CCGATGA 350 0.0 36.642857 18 CGATGAA 350 0.0 36.642857 19 CCTCGAT 160 0.0 36.562504 15 TACGGCT 365 0.0 36.369865 7 TCACGAC 25 0.0021064142 36.0 25 CAATGCG 25 0.0021064142 36.0 1 >>END_MODULE