##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551957_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 629598 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32394162624405 33.0 31.0 34.0 30.0 34.0 2 32.44331144635148 34.0 31.0 34.0 31.0 34.0 3 32.398862448737134 34.0 31.0 34.0 30.0 34.0 4 35.96956152973802 37.0 35.0 37.0 35.0 37.0 5 36.01562743210747 37.0 35.0 37.0 35.0 37.0 6 35.999374203857066 37.0 35.0 37.0 35.0 37.0 7 36.15218917467972 37.0 36.0 37.0 35.0 37.0 8 35.99476491348448 37.0 36.0 37.0 35.0 37.0 9 37.89045708531476 39.0 38.0 39.0 35.0 39.0 10 37.628362860110734 39.0 37.0 39.0 35.0 39.0 11 37.5791981550132 39.0 37.0 39.0 35.0 39.0 12 37.511405690615284 39.0 37.0 39.0 35.0 39.0 13 37.50440280941172 39.0 37.0 39.0 35.0 39.0 14 38.82399721727197 40.0 38.0 41.0 35.0 41.0 15 38.866413171579325 40.0 38.0 41.0 35.0 41.0 16 38.87248371182882 40.0 38.0 41.0 35.0 41.0 17 38.802340541107185 40.0 38.0 41.0 35.0 41.0 18 38.622627454343885 40.0 38.0 41.0 35.0 41.0 19 38.442293336382896 40.0 37.0 41.0 35.0 41.0 20 38.2258997010791 40.0 36.0 41.0 34.0 41.0 21 38.138264416341855 40.0 36.0 41.0 34.0 41.0 22 38.15278002789081 40.0 36.0 41.0 34.0 41.0 23 38.09818963846772 40.0 36.0 41.0 34.0 41.0 24 38.02849913754491 40.0 35.0 41.0 34.0 41.0 25 37.858395357037345 40.0 35.0 41.0 34.0 41.0 26 37.854654875015484 40.0 35.0 41.0 34.0 41.0 27 37.83379076807741 40.0 35.0 41.0 34.0 41.0 28 37.72323450836883 40.0 35.0 41.0 33.0 41.0 29 37.63485906880263 40.0 35.0 41.0 33.0 41.0 30 37.44592581297908 40.0 35.0 41.0 33.0 41.0 31 37.31409089609561 40.0 35.0 41.0 33.0 41.0 32 37.0439312068971 40.0 35.0 41.0 32.0 41.0 33 36.77585062214302 40.0 35.0 41.0 31.0 41.0 34 36.532590637200244 40.0 35.0 41.0 31.0 41.0 35 36.32137967401421 39.0 35.0 41.0 30.0 41.0 36 36.19996886902436 39.0 35.0 41.0 29.0 41.0 37 36.107241446129116 39.0 35.0 41.0 29.0 41.0 38 35.98047801930756 39.0 35.0 41.0 28.0 41.0 39 35.90904196010788 39.0 35.0 41.0 28.0 41.0 40 35.8081283612718 39.0 35.0 41.0 27.0 41.0 41 35.70042789208352 39.0 35.0 41.0 27.0 41.0 42 35.580411627737064 39.0 35.0 41.0 26.0 41.0 43 35.46303990800479 39.0 35.0 41.0 26.0 41.0 44 35.47353390576209 39.0 35.0 41.0 26.0 41.0 45 35.438495675018025 38.0 35.0 41.0 26.0 41.0 46 35.3648185032354 38.0 35.0 41.0 26.0 41.0 47 35.30063786733757 38.0 35.0 41.0 26.0 41.0 48 35.24506907582298 38.0 35.0 40.0 26.0 41.0 49 35.18760860104384 38.0 35.0 40.0 26.0 41.0 50 35.07926327593162 37.0 35.0 40.0 26.0 41.0 51 34.29736593826537 36.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 6.0 10 6.0 11 13.0 12 22.0 13 27.0 14 30.0 15 33.0 16 63.0 17 115.0 18 188.0 19 359.0 20 647.0 21 1114.0 22 1776.0 23 2585.0 24 3778.0 25 5701.0 26 8802.0 27 10791.0 28 10606.0 29 9831.0 30 10052.0 31 10732.0 32 12959.0 33 17263.0 34 31571.0 35 46071.0 36 48540.0 37 66792.0 38 114343.0 39 214502.0 40 275.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.600030495649605 19.023249756193636 21.86125114755765 19.51546860059911 2 37.46533502330058 24.554874697823056 21.86966921750069 16.110121061375672 3 30.01963157443321 23.932731679579668 30.38748534779335 15.660151398193767 4 26.672575198777633 23.646676133024567 32.0147141509344 17.666034517263395 5 25.440360356926167 27.479915755767966 28.66098685192774 18.41873703537813 6 24.27183694992678 33.689592406583245 27.91431993113066 14.124250712359315 7 72.59616453673614 6.205388200089581 16.798655650113247 4.399791613061033 8 73.76643509032748 7.287983761066585 14.56040203431396 4.385179114291977 9 67.9649554159956 7.68077408123914 16.419207176642875 7.935063326122382 10 38.29189419280239 23.952109123599502 22.693687082868752 15.062309600729353 11 28.73246103068943 23.06455865488772 29.2168971311853 18.98608318323756 12 24.93861162201913 20.779926238647516 33.33714528953396 20.944316849799396 13 24.27596656914412 20.73084730256449 35.37606536234232 19.617120765949068 14 20.83599376109835 24.53263828665275 33.17847261268302 21.45289533956588 15 19.906988268704794 22.81741682788065 36.09779573632699 21.17779916708757 16 22.353469991963127 21.860139326999136 33.704363736860664 22.082026944177077 17 21.754834036956915 23.147468702251278 32.40988694373235 22.687810317059455 18 22.076626672892864 22.75785501224591 32.93514274187656 22.230375572984666 19 23.583302361189205 23.384286481214996 31.062519258320386 21.96989189927541 20 24.413514655383274 23.298517466700975 31.80489772839177 20.483070149523982 21 23.74118088049835 24.638896565745128 31.32586189918011 20.294060654576413 22 23.163669516103926 21.714173170816935 31.309502253819105 23.812655059260035 23 23.30820618871089 23.62872817257996 31.186407834840647 21.8766578038685 24 22.132376532326976 24.212910460325475 31.34460401716651 22.310108990181035 25 22.769608543864496 25.547253962051975 30.13605507006058 21.54708242402295 26 21.78802982220401 24.582352548769215 31.13113446993161 22.49848315909517 27 23.648740942633236 23.806142967417305 30.63446834329207 21.910647746657393 28 21.73974504366278 25.11809122646514 31.806486043475363 21.335677686396718 29 22.602676628578873 24.63810240820333 30.265185086356688 22.49403587686111 30 22.28247230772652 26.034866692715035 29.86207071814078 21.82059028141767 31 23.179552666939855 25.713232888287447 27.843004583877327 23.264209860895367 32 23.204965708277346 26.309486370668267 28.32712302135649 22.158424899697906 33 22.807092779837294 26.172414778954188 26.831247875628577 24.189244565579944 34 21.553435684357318 26.822194479652094 27.72340445808278 23.900965377907806 35 22.87396084485656 25.433689433575076 27.548848630395906 24.14350109117246 36 22.907474293120373 28.737225975940202 25.780577447831792 22.574722283107633 37 22.40969634592232 27.593639115753227 27.12810396475211 22.868560573572346 38 21.686059993837336 27.62699373250868 26.958630745332734 23.728315528321247 39 23.082506615332324 25.467997039380684 27.471338854316564 23.97815749097043 40 22.162554518915243 25.094266500211248 29.20720840917538 23.53597057169813 41 21.60585008211589 25.727051229514707 28.16813268148882 24.498966006880583 42 21.877769624427014 26.28089669916359 28.5510754481431 23.290258228266293 43 23.275645729497235 24.782480249301937 28.39176744525872 23.55010657594211 44 22.84251220620142 24.98912004167739 28.803141051909314 23.36522670021188 45 22.27055994459957 24.316150940759023 28.739290785548878 24.67399832909253 46 22.72545338454061 25.735469299457748 28.47737762826438 23.061699687737256 47 21.862680631132882 25.39398155648525 30.38812067382679 22.355217138555076 48 21.824878732143368 25.50103399311942 28.722454645662786 23.951632629074425 49 21.664617740208833 25.133656714284353 30.292186442777773 22.909539102729042 50 21.538029028046466 24.49023027392082 30.147173275645727 23.824567422386984 51 21.74927493416434 24.78359206986045 28.69958290845905 24.76755008751616 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 444.0 1 986.0 2 1528.0 3 11243.0 4 20958.0 5 13171.0 6 5384.0 7 5206.5 8 5029.0 9 4884.0 10 4739.0 11 4570.0 12 4401.0 13 4233.0 14 4065.0 15 3874.0 16 3683.0 17 3432.0 18 3181.0 19 2949.0 20 2717.0 21 2745.0 22 2773.0 23 2840.5 24 2908.0 25 3559.0 26 4831.5 27 5453.0 28 6461.0 29 7469.0 30 8179.0 31 8889.0 32 9682.5 33 10476.0 34 11304.0 35 12132.0 36 13497.5 37 14863.0 38 16069.0 39 17275.0 40 19384.0 41 21493.0 42 23202.5 43 24912.0 44 27947.5 45 30983.0 46 40034.0 47 49085.0 48 48827.5 49 48570.0 50 46754.5 51 44939.0 52 41926.5 53 38914.0 54 36441.0 55 33968.0 56 32504.0 57 31040.0 58 31003.5 59 30967.0 60 30114.5 61 29262.0 62 27606.5 63 25951.0 64 23807.0 65 21663.0 66 18586.5 67 15510.0 68 13603.5 69 11697.0 70 10575.0 71 9453.0 72 8261.0 73 7069.0 74 5942.0 75 3941.5 76 3068.0 77 2474.5 78 1881.0 79 1438.5 80 996.0 81 759.0 82 522.0 83 330.0 84 138.0 85 105.0 86 72.0 87 46.5 88 21.0 89 22.0 90 23.0 91 12.0 92 1.0 93 4.5 94 8.0 95 4.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 629598.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.328510472316516 #Duplication Level Percentage of deduplicated Percentage of total 1 70.94146626291571 22.934319350021592 2 7.405038124625593 4.78787705119723 3 3.347686546872667 3.2467715876581837 4 2.3091849402177465 2.9861003808938005 5 1.8284014631135912 2.9554747923933284 6 1.5737797299194642 3.052677268789251 7 1.4959839036435794 3.3854051906750877 8 1.315293676473991 3.4017188315248887 9 1.2612913870758864 3.669810463415288 >10 8.422036929811387 41.015885951952455 >50 0.05930912989951092 1.4215743944417631 >100 0.0326200214443591 2.350542982630231 >500 0.005436670240726516 1.076286964244255 >1k 0.0019769709966278243 1.3725215295216968 >5k 0.0 0.0 >10k+ 4.942427491569561E-4 2.343033260640997 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14664 2.3291052385808086 No Hit GAATCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTC 2691 0.42741558899488247 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCG 2636 0.4186798560351208 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGC 2169 0.3445055416313267 No Hit GCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC 1094 0.1737616701450767 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCC 858 0.13627743417228136 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 750 0.1191236312694767 No Hit GAACTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCT 701 0.1113408873598709 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.1766301671860457E-4 0.0 0.0 0.08815148713941277 0.0 2 3.1766301671860457E-4 0.0 0.0 0.38802537492177547 0.0 3 3.1766301671860457E-4 0.0 0.0 0.590059053554808 0.0 4 3.1766301671860457E-4 0.0 0.0 0.9197932649087195 0.0 5 3.1766301671860457E-4 0.0 0.0 1.9305969841073192 0.0 6 3.1766301671860457E-4 0.0 0.0 2.648674233399725 0.0 7 3.1766301671860457E-4 0.0 0.0 3.2090317948913434 0.0 8 3.1766301671860457E-4 0.0 0.0 4.003665831212933 0.0 9 3.1766301671860457E-4 0.0 0.0 4.423298676298209 0.0 10 3.1766301671860457E-4 0.0 0.0 5.494140705656625 0.0 11 3.1766301671860457E-4 0.0 0.0 6.263838195165804 0.0 12 3.1766301671860457E-4 0.0 0.0 7.178866514823745 0.0 13 3.1766301671860457E-4 0.0 0.0 7.470957658696501 0.0 14 3.1766301671860457E-4 0.0 0.0 7.622482917671276 0.0 15 3.1766301671860457E-4 0.0 0.0 7.857871213059762 0.0 16 3.1766301671860457E-4 0.0 0.0 8.169180969443994 0.0 17 3.1766301671860457E-4 0.0 0.0 8.519086782359537 0.0 18 3.1766301671860457E-4 0.0 0.0 8.91695971079959 0.0 19 3.1766301671860457E-4 0.0 0.0 9.220804386290935 0.0 20 3.1766301671860457E-4 0.0 0.0 9.459369311846606 0.0 21 4.764945250779069E-4 0.0 0.0 9.728112223990546 0.0 22 4.764945250779069E-4 0.0 0.0 10.022268177471974 0.0 23 4.764945250779069E-4 0.0 0.0 10.307847229502 0.0 24 4.764945250779069E-4 0.0 0.0 10.548635796174702 0.0 25 4.764945250779069E-4 0.0 0.0 10.770841076369367 0.0 26 4.764945250779069E-4 0.0 0.0 10.980657498912004 0.0 27 4.764945250779069E-4 0.0 0.0 11.196033024247217 0.0 28 4.764945250779069E-4 0.0 0.0 11.419985451033835 0.0 29 4.764945250779069E-4 0.0 0.0 11.64187306821178 0.0 30 4.764945250779069E-4 0.0 0.0 11.907598181696892 0.0 31 4.764945250779069E-4 0.0 0.0 12.124085527590621 0.0 32 4.764945250779069E-4 0.0 0.0 12.371227354597696 0.0 33 4.764945250779069E-4 0.0 0.0 12.590097173116813 0.0 34 4.764945250779069E-4 0.0 0.0 12.813890768395071 0.0 35 4.764945250779069E-4 0.0 0.0 13.060079606351989 0.0 36 4.764945250779069E-4 0.0 0.0 13.282920212580091 0.0 37 4.764945250779069E-4 0.0 0.0 13.514178888751236 0.0 38 4.764945250779069E-4 0.0 0.0 13.738766641571289 0.0 39 4.764945250779069E-4 0.0 0.0 13.961924910816109 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTAAG 20 7.030852E-4 45.000004 1 TAAGACG 20 7.030852E-4 45.000004 1 CGTTTTT 5515 0.0 42.633728 1 CCGTCGA 65 0.0 41.538464 41 CGGTCTA 60 3.6379788E-12 41.250004 31 GTCGAAT 55 6.002665E-11 40.909092 43 AACGGGA 205 0.0 39.512196 4 TACGAAT 40 3.4548975E-7 39.375004 12 CGAATAT 40 3.4548975E-7 39.375004 14 CATACGA 110 0.0 38.86364 18 GCAAACG 35 6.2437866E-6 38.57143 1 TTAAACG 35 6.2437866E-6 38.57143 1 ATGCGAG 35 6.2437866E-6 38.57143 1 CGATGAA 440 0.0 38.352276 19 TATTAGT 100 0.0 38.250004 30 GTACGAG 65 9.094947E-12 38.076927 1 CGGCGAA 95 0.0 37.894737 31 CGCATCG 30 1.1393352E-4 37.500004 21 GTTAGCG 30 1.1393352E-4 37.500004 1 CGTTCGG 60 1.546141E-10 37.500004 45 >>END_MODULE