##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551951_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 391756 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.970956411643982 33.0 31.0 34.0 30.0 34.0 2 32.07444174435108 33.0 31.0 34.0 30.0 34.0 3 32.086655979742496 33.0 31.0 34.0 30.0 34.0 4 35.7485220392285 37.0 35.0 37.0 35.0 37.0 5 35.750497758809054 37.0 35.0 37.0 35.0 37.0 6 35.638239108016215 37.0 35.0 37.0 35.0 37.0 7 35.81747056841503 37.0 35.0 37.0 35.0 37.0 8 35.07814813302157 37.0 35.0 37.0 32.0 37.0 9 36.72751406487712 39.0 37.0 39.0 32.0 39.0 10 36.56735570099756 38.0 35.0 39.0 32.0 39.0 11 36.995060701048615 39.0 37.0 39.0 34.0 39.0 12 37.06224027200604 39.0 37.0 39.0 34.0 39.0 13 37.09269545329236 39.0 37.0 39.0 33.0 39.0 14 38.22332268044395 40.0 38.0 41.0 33.0 41.0 15 38.13023667793218 40.0 37.0 41.0 33.0 41.0 16 38.389124863435406 40.0 38.0 41.0 34.0 41.0 17 38.13086206720509 40.0 37.0 41.0 33.0 41.0 18 38.052619487640264 40.0 37.0 41.0 34.0 41.0 19 37.96345939819684 40.0 37.0 41.0 34.0 41.0 20 37.638741972043825 40.0 36.0 41.0 32.0 41.0 21 37.84257548065633 40.0 36.0 41.0 33.0 41.0 22 37.8490616608297 40.0 36.0 41.0 33.0 41.0 23 37.71189975392846 40.0 36.0 41.0 33.0 41.0 24 37.68676165776657 40.0 36.0 41.0 33.0 41.0 25 37.65619416167206 39.0 36.0 41.0 33.0 41.0 26 37.625042118053074 40.0 36.0 41.0 33.0 41.0 27 37.50001021043711 40.0 36.0 41.0 33.0 41.0 28 37.322088238597495 40.0 35.0 41.0 32.0 41.0 29 37.42253596626472 40.0 36.0 41.0 32.0 41.0 30 37.128263510960906 40.0 35.0 41.0 32.0 41.0 31 37.07303270403006 39.0 35.0 41.0 31.0 41.0 32 36.68648597596463 40.0 35.0 41.0 30.0 41.0 33 36.48693829832855 40.0 35.0 41.0 30.0 41.0 34 36.33560940993884 40.0 35.0 41.0 30.0 41.0 35 36.02988084419894 40.0 35.0 41.0 26.0 41.0 36 35.9701931814701 39.0 35.0 41.0 27.0 41.0 37 35.88566607786479 40.0 35.0 41.0 26.0 41.0 38 35.702618466596554 39.0 35.0 41.0 24.0 41.0 39 35.65527266972299 39.0 35.0 41.0 24.0 41.0 40 35.48722163795832 39.0 35.0 41.0 24.0 41.0 41 35.332957248899824 39.0 35.0 41.0 24.0 41.0 42 35.37071034010966 39.0 35.0 41.0 23.0 41.0 43 35.41905165460133 39.0 35.0 41.0 24.0 41.0 44 35.666156995680986 39.0 35.0 41.0 25.0 41.0 45 35.69484321873819 39.0 35.0 41.0 26.0 41.0 46 35.57721132541684 39.0 35.0 41.0 25.0 41.0 47 35.40359560542787 39.0 35.0 41.0 24.0 41.0 48 35.3707613922952 39.0 35.0 41.0 24.0 41.0 49 35.33761320822144 39.0 35.0 41.0 24.0 41.0 50 35.24691900060242 39.0 35.0 41.0 24.0 41.0 51 34.41849263316963 37.0 34.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 4.0 12 2.0 13 6.0 14 9.0 15 13.0 16 20.0 17 36.0 18 99.0 19 335.0 20 919.0 21 1964.0 22 2991.0 23 3877.0 24 4334.0 25 5075.0 26 5870.0 27 5927.0 28 5346.0 29 4989.0 30 5293.0 31 6717.0 32 8487.0 33 11788.0 34 19564.0 35 25733.0 36 27599.0 37 43114.0 38 81848.0 39 119762.0 40 33.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.78572376683446 15.600782119482535 19.822542603048838 15.790951510634171 2 27.505641266502618 38.23145018838257 20.76241333891504 13.500495206199778 3 23.679024699047364 37.82022483382514 26.623459500301205 11.87729096682629 4 21.960608133634203 20.11660319178264 43.757083490744236 14.16570518383892 5 35.214010761800715 22.552047703162174 25.22794800845424 17.005993526582873 6 19.72758553793688 43.8055830670111 25.104912241293047 11.361919153758974 7 66.00588121177468 3.5562952449994385 26.55019961404548 3.8876239291804082 8 62.91722398635886 17.11013998509276 13.966346399289353 6.006289629259029 9 58.40267921869735 5.065397849681945 14.268064815854768 22.263858115765935 10 41.035236218462515 17.671203504222017 23.102645524254896 18.19091475306058 11 30.643819111896182 18.6950550853082 28.63006565311061 22.031060149685008 12 21.29871654805542 15.450178172127549 34.08575746127692 29.16534781854011 13 24.28705622887716 17.624490754449198 40.76797802713934 17.3204749895343 14 18.89237178243601 28.635936654448173 30.586130142231386 21.88556142088443 15 14.5687621887093 19.981825421946315 41.514360979793544 23.93505140955084 16 16.386730515933387 21.480207067664566 29.693482677993444 32.439579738408604 17 17.73272138780261 26.334759391049527 33.33095089800794 22.601568323139915 18 17.462910587202238 21.66986593696076 32.539131500219526 28.328091975617475 19 18.0630290282727 23.24533638285055 28.900642236494146 29.790992352382606 20 23.68846935337302 22.777187841411493 35.224221198909525 18.310121606305966 21 21.318882161345325 31.208201023085795 29.111998284646567 18.36091853092231 22 18.738194182092936 19.263265910413622 35.619620375948294 26.378919531545147 23 22.99390436904604 25.88932907217758 30.21472549239833 20.902041066378054 24 22.108404210784265 24.41009199603835 27.418597290149993 26.062906503027396 25 17.37586661084961 34.02832375253985 25.607265747046632 22.98854388956391 26 18.105402342274274 20.70676645667201 33.26356201308978 27.924269187963937 27 24.997957912578237 25.100317544594088 25.919194600720857 23.982529942106822 28 17.15659747393786 25.728004165858344 32.40001429461195 24.71538406559185 29 20.33331971941719 19.131296010782222 30.588682751508596 29.946701518291995 30 19.070288649057066 33.00268534495962 28.041944475643003 19.885081530340315 31 26.53360765374366 20.992913956646483 23.257333646453404 29.216144743156452 32 25.54293999326111 26.6699169891463 24.03051899651824 23.756624021074344 33 24.077487007218778 25.562850345623296 23.531739143752745 26.82792350340518 34 27.489559828056237 20.573264991474286 24.61991647862445 27.317258701845027 35 22.53341365543859 24.6280848283115 27.59804572233737 25.240455793912535 36 23.251207384188117 30.079692461634284 22.488232471232095 24.180867682945507 37 20.18705520783345 26.256904808094834 28.837337526419503 24.71870245765221 38 22.961996753081 26.257925851805712 23.52178396757165 27.258293427541634 39 25.2562819714312 24.72304189342346 24.13645228152217 25.884223853623173 40 20.043088044599187 25.716262163183206 30.05467689071769 24.185972901499913 41 23.559307323946538 27.305261438242173 23.411766507724195 25.723664730087094 42 21.231327663137257 21.479186023953687 33.92009311918643 23.369393193722622 43 22.85708451178795 27.388221239751275 24.30339292825126 25.451301320209517 44 22.84968194488406 22.28300268534496 29.283788889002338 25.583526480768644 45 21.706112988697047 19.54252136533965 28.088912486343542 30.662453159619762 46 28.148388282502374 25.083725584292267 24.34627676410827 22.42160936909709 47 17.801386577359377 24.70211049735039 35.92516770642951 21.571335218860717 48 23.637672428756677 24.591071993792056 25.827811188596982 25.943444388854285 49 20.720040024913466 19.68699905042935 35.837102686366 23.75585823829118 50 23.017388374396308 21.262724757246858 29.788184482177684 25.93170238617915 51 20.856859882171555 20.18705520783345 27.115347308018258 31.84073760197674 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 28.0 1 99.0 2 170.0 3 3066.0 4 5962.0 5 4055.0 6 2148.0 7 2161.0 8 2174.0 9 2125.5 10 2077.0 11 1992.5 12 1908.0 13 1779.0 14 1650.0 15 1507.0 16 1364.0 17 1316.0 18 1268.0 19 1202.5 20 1137.0 21 1113.0 22 1089.0 23 1241.0 24 1393.0 25 1445.0 26 1835.5 27 2174.0 28 2505.0 29 2836.0 30 3186.5 31 3537.0 32 4439.5 33 5342.0 34 5991.5 35 6641.0 36 7324.0 37 8007.0 38 8385.5 39 8764.0 40 9971.0 41 11178.0 42 12258.5 43 13339.0 44 16122.0 45 18905.0 46 46832.5 47 74760.0 48 56017.5 49 37275.0 50 37313.0 51 37351.0 52 32497.5 53 27644.0 54 25318.0 55 22992.0 56 21292.0 57 19592.0 58 17453.0 59 15314.0 60 14103.0 61 12892.0 62 11898.0 63 10904.0 64 10038.5 65 9173.0 66 7975.5 67 6778.0 68 5798.0 69 4818.0 70 3918.0 71 3018.0 72 2576.5 73 2135.0 74 1776.0 75 997.0 76 577.0 77 423.0 78 269.0 79 203.5 80 138.0 81 106.5 82 75.0 83 45.5 84 16.0 85 21.0 86 26.0 87 15.0 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 391756.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.47371191380788 #Duplication Level Percentage of deduplicated Percentage of total 1 73.93890933348573 25.48948659583748 2 9.137035791392009 6.299750792371994 3 3.461161919729782 3.5795729672342023 4 2.0384880199802224 2.810969949621873 5 1.5851469728941496 2.7322950042298775 6 1.279941197851159 2.6474594472801014 7 1.125141304150588 2.7151458027129425 8 0.9519241696916009 2.625308767179121 9 0.8605768383923043 2.6700550205788707 >10 5.531170094753649 29.521348765161793 >50 0.05637976379992259 1.3597665961884957 >100 0.02151333092365467 1.2416149754551715 >500 0.005192872981571817 1.279208672961229 >1k 0.005192872981571817 5.307872052641007 >5k 0.0 0.0 >10k+ 0.002225516992102207 9.720144590545862 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGC 13933 3.5565505059271585 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTC 12585 3.212458775360173 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCG 11490 2.9329480595064275 No Hit GCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCTGC 3792 0.9679494379154372 TruSeq Adapter, Index 15 (95% over 23bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAGCAGTAT 3555 0.9074525980457224 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3379 0.8625266747669468 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCT 2623 0.6695494134103881 No Hit GAACTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCT 2580 0.6585731935184146 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAGCAGTATCGTA 2479 0.6327918398186626 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTC 2347 0.599097397359581 No Hit GAATGCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTT 998 0.2547504058648751 No Hit CCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCTGC 843 0.21518496206822615 TruSeq Adapter, Index 15 (95% over 23bp) CTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCTGCT 795 0.20293243753765097 TruSeq Adapter, Index 14 (95% over 22bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATG 771 0.1968061752723634 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCAGCAGTA 544 0.13886194467985175 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCAGCAGTATCGT 543 0.13860668375213142 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTAT 508 0.12967255128192037 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.105218554406314E-4 0.0 0.0 0.21365339650190424 0.0 2 5.105218554406314E-4 0.0 0.0 1.6112069757706327 0.0 3 5.105218554406314E-4 0.0 0.0 1.9527460970604151 0.0 4 5.105218554406314E-4 0.0 0.0 2.9906370291712188 0.0 5 5.105218554406314E-4 0.0 0.0 7.207037033255394 0.0 6 5.105218554406314E-4 0.0 0.0 8.179325906942076 0.0 7 5.105218554406314E-4 0.0 0.0 9.498259120472948 0.0 8 5.105218554406314E-4 0.0 0.0 11.161539325498525 0.0 9 5.105218554406314E-4 0.0 0.0 11.527072973994017 0.0 10 5.105218554406314E-4 0.0 0.0 15.301105790338884 0.0 11 5.105218554406314E-4 0.0 0.0 16.54320546462594 0.0 12 5.105218554406314E-4 0.0 0.0 21.200951612738542 0.0 13 5.105218554406314E-4 0.0 0.0 21.794943791543716 0.0 14 5.105218554406314E-4 0.0 0.0 22.083899161723114 0.0 15 5.105218554406314E-4 0.0 0.0 23.007943720070656 0.0 16 5.105218554406314E-4 0.0 0.0 23.761473978701027 0.0 17 5.105218554406314E-4 0.0 0.0 24.5451250268024 0.0 18 5.105218554406314E-4 0.0 0.0 25.25960036349156 0.0 19 5.105218554406314E-4 0.0 0.0 26.74547422375152 0.0 20 5.105218554406314E-4 0.0 0.0 27.367034582750488 0.0 21 5.105218554406314E-4 0.0 0.0 27.9929343775207 0.0 22 5.105218554406314E-4 0.0 0.0 28.673460010823064 0.0 23 5.105218554406314E-4 0.0 0.0 29.289659890339905 0.0 24 5.105218554406314E-4 0.0 0.0 29.798394919286494 0.0 25 5.105218554406314E-4 0.0 0.0 30.21498075332605 0.0 26 5.105218554406314E-4 0.0 0.0 30.650455896016908 0.0 27 5.105218554406314E-4 0.0 0.0 31.091802040045334 0.0 28 5.105218554406314E-4 0.0 0.0 31.49230643563851 0.0 29 5.105218554406314E-4 0.0 0.0 31.894597657725726 0.0 30 5.105218554406314E-4 0.0 0.0 32.3290517567057 0.0 31 5.105218554406314E-4 0.0 0.0 32.751763853010544 0.0 32 5.105218554406314E-4 0.0 0.0 33.1808574725084 0.0 33 5.105218554406314E-4 0.0 0.0 33.616332615199255 0.0 34 5.105218554406314E-4 0.0 0.0 34.04823410490203 0.0 35 5.105218554406314E-4 0.0 0.0 34.46533046079703 0.0 36 5.105218554406314E-4 0.0 0.0 34.86660063917336 0.0 37 5.105218554406314E-4 0.0 0.0 35.289823257333644 0.0 38 5.105218554406314E-4 0.0 0.0 35.69645391519211 0.0 39 5.105218554406314E-4 0.0 0.0 36.0946609624358 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCGA 30 2.1618253E-6 45.000004 41 CGATCGA 115 0.0 45.000004 41 GCATAAG 20 7.0275884E-4 45.0 1 TCGCAGG 45 3.8380676E-10 45.0 2 CGAGTGG 20 7.0275884E-4 45.0 29 ACCGCAG 25 3.8860824E-5 45.0 23 CTCCATA 20 7.0275884E-4 45.0 11 CACGATC 20 7.0275884E-4 45.0 39 TGACGCG 20 7.0275884E-4 45.0 1 TAGCACG 20 7.0275884E-4 45.0 1 ACGATCG 50 2.1827873E-11 45.0 40 TGCGATG 20 7.0275884E-4 45.0 1 TACGACC 20 7.0275884E-4 45.0 6 AACGCGA 20 7.0275884E-4 45.0 25 CGTAAGC 45 3.8380676E-10 45.0 43 CACCGTA 25 3.8860824E-5 45.0 40 TAGCTAG 20 7.0275884E-4 45.0 1 GCACTAC 20 7.0275884E-4 45.0 9 AAATGCG 20 7.0275884E-4 45.0 1 CCGACTT 55 1.8189894E-12 44.999996 44 >>END_MODULE