SRR3551926_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551926_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	273995
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGC	6879	2.5106297560174453	No Hit
GAATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC	5848	2.1343455172539647	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCG	5616	2.0496724392780887	No Hit
GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	2729	0.9960035767076042	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2014	0.7350499096698845	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTTAACAT	1513	0.5521998576616362	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT	1283	0.4682567200131389	No Hit
GAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT	1081	0.39453274694793694	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTC	966	0.35256117812368837	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTA	926	0.33796237157612363	No Hit
CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	920	0.33577255059398897	No Hit
CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT	563	0.20547820215697365	No Hit
GAATGATACGGCCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATG	343	0.1251847661453676	No Hit
TCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC	336	0.12262997499954378	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACGTAA	30	2.1594296E-6	45.000004	24
CGATGTT	30	2.1594296E-6	45.000004	10
ATTTAGG	25	3.8830032E-5	45.0	2
CGTATTC	20	7.023872E-4	45.0	28
CGTATGG	25	3.8830032E-5	45.0	2
CCGCTTA	25	3.8830032E-5	45.0	41
AGACGCA	20	7.023872E-4	45.0	13
GCGATCC	20	7.023872E-4	45.0	33
ATTGGCG	25	3.8830032E-5	45.0	12
ATTGGAT	20	7.023872E-4	45.0	22
CGTAAGC	40	6.7830115E-9	45.0	43
ATTGCGG	25	3.8830032E-5	45.0	2
TCGGTTG	20	7.023872E-4	45.0	1
GCGTAAG	20	7.023872E-4	45.0	1
CCCGCTT	25	3.8830032E-5	45.0	40
ATCTGCG	20	7.023872E-4	45.0	44
CGCTTAT	20	7.023872E-4	45.0	35
CGTTTTT	1305	0.0	44.137928	1
TACGGCT	685	0.0	43.68613	7
ACGGCTG	720	0.0	41.562504	8