##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551926_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 273995 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01653679811675 33.0 31.0 34.0 30.0 34.0 2 32.117899961678134 33.0 31.0 34.0 30.0 34.0 3 32.1137320024088 33.0 31.0 34.0 30.0 34.0 4 35.74467052318473 37.0 35.0 37.0 35.0 37.0 5 35.78185003375974 37.0 35.0 37.0 35.0 37.0 6 35.68284822715743 37.0 35.0 37.0 35.0 37.0 7 35.79612766656326 37.0 35.0 37.0 35.0 37.0 8 35.133378346320185 37.0 35.0 37.0 32.0 37.0 9 36.86827131881969 39.0 37.0 39.0 32.0 39.0 10 36.69001624117229 38.0 35.0 39.0 32.0 39.0 11 37.007193561926314 39.0 37.0 39.0 34.0 39.0 12 36.99170057847771 39.0 37.0 39.0 33.0 39.0 13 37.06803773791493 39.0 37.0 39.0 33.0 39.0 14 38.11074654646983 40.0 37.0 41.0 33.0 41.0 15 38.09064398985383 40.0 37.0 41.0 33.0 41.0 16 38.307921677402874 40.0 37.0 41.0 34.0 41.0 17 38.18664209200898 40.0 37.0 41.0 34.0 41.0 18 38.049146882242376 40.0 37.0 41.0 34.0 41.0 19 37.952542929615504 40.0 37.0 41.0 34.0 41.0 20 37.89849814777642 40.0 36.0 41.0 34.0 41.0 21 37.911699118597056 40.0 36.0 41.0 34.0 41.0 22 37.99775543349331 40.0 36.0 41.0 34.0 41.0 23 38.017533166663625 40.0 36.0 41.0 34.0 41.0 24 37.85037683169401 40.0 35.0 41.0 33.0 41.0 25 37.6454387853793 39.0 35.0 41.0 33.0 41.0 26 37.745834778006895 40.0 35.0 41.0 33.0 41.0 27 37.7428274238581 40.0 35.0 41.0 33.0 41.0 28 37.56838263471961 40.0 35.0 41.0 33.0 41.0 29 37.67066552309349 40.0 36.0 41.0 33.0 41.0 30 37.31608241026296 40.0 35.0 41.0 33.0 41.0 31 37.221281410244714 39.0 35.0 41.0 32.0 41.0 32 37.148812934542605 40.0 35.0 41.0 32.0 41.0 33 36.98678078067118 40.0 35.0 41.0 31.0 41.0 34 36.82539462398949 40.0 35.0 41.0 31.0 41.0 35 36.73904268326064 40.0 35.0 41.0 31.0 41.0 36 36.62836913082356 40.0 35.0 41.0 31.0 41.0 37 36.65362871585248 40.0 35.0 41.0 31.0 41.0 38 36.403821237613826 39.0 35.0 41.0 30.0 41.0 39 36.35523275972189 39.0 35.0 41.0 30.0 41.0 40 36.20193069216592 39.0 35.0 41.0 30.0 41.0 41 36.012584171244 39.0 35.0 41.0 29.0 41.0 42 36.25509589591051 39.0 35.0 41.0 30.0 41.0 43 36.18835380207668 39.0 35.0 41.0 30.0 41.0 44 36.27269110750196 39.0 35.0 41.0 30.0 41.0 45 36.22712093286374 39.0 35.0 41.0 30.0 41.0 46 36.1442325589883 39.0 35.0 41.0 30.0 41.0 47 35.993240752568475 39.0 35.0 41.0 29.0 41.0 48 36.00573003156992 39.0 35.0 41.0 30.0 41.0 49 36.01297103961751 39.0 35.0 41.0 30.0 41.0 50 35.89984853738207 39.0 35.0 41.0 29.0 41.0 51 35.04676362707349 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 0.0 9 2.0 10 3.0 11 5.0 12 7.0 13 5.0 14 16.0 15 18.0 16 20.0 17 34.0 18 74.0 19 169.0 20 300.0 21 631.0 22 946.0 23 1413.0 24 1806.0 25 2402.0 26 3211.0 27 3597.0 28 3664.0 29 3543.0 30 3885.0 31 4663.0 32 6064.0 33 8674.0 34 16097.0 35 21449.0 36 19518.0 37 30485.0 38 56440.0 39 84829.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.73590758955456 15.539334659391596 17.489005273818865 19.235752477234985 2 30.36989726089892 31.005675286045363 20.441613898063835 18.18281355499188 3 27.60159856931696 31.014799540137595 25.797916020365335 15.585685870180113 4 26.32931257869669 20.686508877899232 34.638588295406855 18.345590247997226 5 30.07244657749229 23.732184893884924 25.424186572747676 20.771181955875107 6 23.275607219109837 35.95649555648826 25.870545082939472 14.897352141462436 7 65.01578495957956 6.2596032774320705 21.885435865617985 6.8391758973703904 8 62.463548604901554 13.56192631252395 15.336776218544134 8.637748864030366 9 58.05288417671856 7.76656508330444 16.2871585247906 17.893392215186406 10 40.69599810215515 18.428803445318344 24.0081023376339 16.867096114892608 11 31.532327232248765 21.61900764612493 27.181882881074472 19.666782240551836 12 26.35011587802697 18.664574171061517 30.70019525903757 24.28511469187394 13 24.893519954743702 22.59639774448439 34.88530812606069 17.624774174711217 14 20.46752677968576 27.663643497144108 29.087027135531667 22.78180258763846 15 16.740086497928793 22.799321155495537 39.0908593222504 21.36973302432526 16 19.518969324257743 23.471961167174584 29.989963320498546 27.019106188069124 17 19.954743699702547 24.72855344075622 31.545831128305263 23.77087173123597 18 20.33504261026661 23.162466468366212 31.853865946458875 24.6486249749083 19 20.966805963612476 25.17673680176646 28.21584335480574 25.640613879815326 20 22.607346849395064 24.51285607401595 34.10317706527491 18.776620011314073 21 22.50114053176153 28.508549426084418 29.268052336721475 19.72225770543258 22 20.200368619865326 22.344203361375207 32.026496833883826 25.428931184875637 23 21.230679391959708 26.369094326538807 30.479388310005657 21.92083797149583 24 22.671581598204344 22.3511377944853 29.787404879651085 25.18987572765926 25 18.859468238471504 30.62647128597237 27.810361502947135 22.70369897260899 26 19.977736820014965 23.84970528659282 31.39765324184748 24.774904651544734 27 22.949688862935457 25.684775269621706 27.96875855398821 23.396777313454624 28 17.591926859979196 24.58293034544426 34.32215916348839 23.50298363108816 29 23.812843300060223 21.2576871840727 30.58668953813026 24.34277997773682 30 19.8087556342269 26.824942060986512 30.06076753225424 23.305534772532347 31 22.644938776255042 23.704447161444552 28.704173433821783 24.946440628478623 32 23.96649573897334 25.868355261957337 28.757459077720398 21.40768992134893 33 20.477745944269056 26.38040840161317 26.040986149382288 27.100859504735485 34 23.459187211445464 25.60557674410117 27.789923173780544 23.14531287067282 35 19.757659811310425 23.937298125878208 26.13916312341466 30.165878939396706 36 23.367579700359496 27.987737002500047 26.93479808025694 21.70988521688352 37 18.686107410719174 23.654081278855454 32.796218909104184 24.863592401321192 38 18.73793317396303 27.335535319987592 28.289932298034635 25.636599208014744 39 21.37046296465264 27.689191408602348 29.900545630394713 21.039799996350297 40 20.797459807660722 26.227485903027425 27.86985163962846 25.105202649683388 41 19.25436595558313 30.232303509188124 24.857752878702165 25.655577656526578 42 19.99927005967262 23.103706272012264 30.62428146499024 26.272742203324878 43 23.09202722677421 26.44683297140459 26.513622511359696 23.947517290461505 44 21.106954506469098 23.298235369258563 30.23777806164346 25.357032062628882 45 20.32263362470118 21.66061424478549 28.80490519899998 29.211846931513346 46 25.964342415007575 25.072355334951368 27.609627912918118 21.35367433712294 47 18.37807259256556 23.72160075913794 35.113414478366394 22.78691216993011 48 21.039799996350297 25.184766145367615 27.851968101607692 25.92346575667439 49 20.021898209821348 20.647092100220807 34.81085421266811 24.52015547728973 50 21.497472581616453 21.95441522655523 30.677567108888848 25.870545082939472 51 20.264238398510923 21.47703425244986 27.715104290224275 30.54362305881494 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 57.0 1 178.0 2 299.0 3 2089.5 4 3880.0 5 2689.5 6 1499.0 7 1448.0 8 1397.0 9 1403.0 10 1409.0 11 1369.0 12 1329.0 13 1250.5 14 1172.0 15 1124.5 16 1077.0 17 1034.5 18 992.0 19 901.0 20 810.0 21 870.5 22 931.0 23 926.5 24 922.0 25 1006.5 26 1275.5 27 1460.0 28 1851.0 29 2242.0 30 2558.0 31 2874.0 32 3376.5 33 3879.0 34 4411.5 35 4944.0 36 5145.0 37 5346.0 38 6425.5 39 7505.0 40 8604.0 41 9703.0 42 12146.0 43 14589.0 44 28416.0 45 42243.0 46 34401.0 47 26559.0 48 27054.0 49 27549.0 50 23580.0 51 19611.0 52 18061.0 53 16511.0 54 14680.0 55 12849.0 56 11918.5 57 10988.0 58 10358.5 59 9729.0 60 9086.5 61 8444.0 62 7412.0 63 6380.0 64 5859.5 65 5339.0 66 5108.0 67 4877.0 68 4406.0 69 3935.0 70 3345.0 71 2755.0 72 2620.0 73 2485.0 74 2071.0 75 1405.5 76 1154.0 77 925.0 78 696.0 79 552.0 80 408.0 81 302.5 82 197.0 83 157.5 84 118.0 85 88.5 86 59.0 87 50.5 88 42.0 89 22.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 273995.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.16449205277468 #Duplication Level Percentage of deduplicated Percentage of total 1 74.19372068924997 25.34790780853665 2 10.06099840827271 6.874578003248234 3 3.6182418357209243 3.7084618332451322 4 1.7669241205439647 2.4146426029672075 5 1.134506297471397 1.9379915691892187 6 0.8663696866754266 1.7759448165112501 7 0.7584740783471675 1.8139017135349182 8 0.5811407022829002 1.5883501523750434 9 0.532000128192802 1.6357962736546285 >10 6.394684271811471 38.784284384751544 >50 0.05127712078966766 1.1784886585521634 >100 0.028843380444188056 1.8671873574335296 >500 0.004273093399138971 1.2317743024507748 >1k 0.005341366748923715 3.146042811000201 >5k 0.0032048200493542288 6.694647712549499 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGC 6879 2.5106297560174453 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 5848 2.1343455172539647 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCG 5616 2.0496724392780887 No Hit GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 2729 0.9960035767076042 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2014 0.7350499096698845 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTTAACAT 1513 0.5521998576616362 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT 1283 0.4682567200131389 No Hit GAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT 1081 0.39453274694793694 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTC 966 0.35256117812368837 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTA 926 0.33796237157612363 No Hit CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 920 0.33577255059398897 No Hit CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT 563 0.20547820215697365 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATG 343 0.1251847661453676 No Hit TCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 336 0.12262997499954378 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.21460245624920163 0.0 2 0.0 0.0 0.0 1.8044124892790014 0.0 3 0.0 0.0 0.0 2.196755415244804 0.0 4 0.0 0.0 0.0 3.06757422580704 0.0 5 0.0 0.0 0.0 6.531871019544152 0.0 6 0.0 0.0 0.0 7.428967681892005 0.0 7 0.0 0.0 0.0 8.776072556068542 0.0 8 0.0 0.0 0.0 10.223179255095896 0.0 9 0.0 0.0 0.0 10.643259913502071 0.0 10 0.0 0.0 0.0 13.635650285589152 0.0 11 0.0 0.0 0.0 15.134217777696673 0.0 12 0.0 0.0 0.0 18.945966167265826 0.0 13 0.0 0.0 0.0 19.577364550448 0.0 14 0.0 0.0 0.0 19.874085293527255 0.0 15 0.0 0.0 0.0 20.65767623496779 0.0 16 0.0 0.0 0.0 21.54382379240497 0.0 17 0.0 0.0 0.0 22.500045621270463 0.0 18 0.0 0.0 0.0 23.372324312487454 0.0 19 3.649701636891184E-4 0.0 0.0 24.546798299239036 0.0 20 3.649701636891184E-4 0.0 0.0 25.223088012554975 0.0 21 3.649701636891184E-4 0.0 0.0 25.93587474223982 0.0 22 3.649701636891184E-4 0.0 0.0 26.67311447289184 0.0 23 3.649701636891184E-4 0.0 0.0 27.353418858008357 0.0 24 3.649701636891184E-4 0.0 0.0 27.91510793992591 0.0 25 3.649701636891184E-4 0.0 0.0 28.442124856293 0.0 26 3.649701636891184E-4 0.0 0.0 28.909651635978758 0.0 27 3.649701636891184E-4 0.0 0.0 29.435573641854777 0.0 28 3.649701636891184E-4 0.0 0.0 29.89799083924889 0.0 29 3.649701636891184E-4 0.0 0.0 30.39982481432143 0.0 30 3.649701636891184E-4 0.0 0.0 30.90968813299513 0.0 31 3.649701636891184E-4 0.0 0.0 31.404952645121263 0.0 32 3.649701636891184E-4 0.0 0.0 31.894742604792057 0.0 33 3.649701636891184E-4 0.0 0.0 32.36993375791529 0.0 34 3.649701636891184E-4 0.0 0.0 32.828336283508825 0.0 35 3.649701636891184E-4 0.0 0.0 33.303162466468365 0.0 36 3.649701636891184E-4 0.0 0.0 33.75901020091607 0.0 37 3.649701636891184E-4 0.0 0.0 34.197704337670395 0.0 38 3.649701636891184E-4 0.0 0.0 34.6334787131152 0.0 39 3.649701636891184E-4 0.0 0.0 35.04005547546488 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACGTAA 30 2.1594296E-6 45.000004 24 CGATGTT 30 2.1594296E-6 45.000004 10 ATTTAGG 25 3.8830032E-5 45.0 2 CGTATTC 20 7.023872E-4 45.0 28 CGTATGG 25 3.8830032E-5 45.0 2 CCGCTTA 25 3.8830032E-5 45.0 41 AGACGCA 20 7.023872E-4 45.0 13 GCGATCC 20 7.023872E-4 45.0 33 ATTGGCG 25 3.8830032E-5 45.0 12 ATTGGAT 20 7.023872E-4 45.0 22 CGTAAGC 40 6.7830115E-9 45.0 43 ATTGCGG 25 3.8830032E-5 45.0 2 TCGGTTG 20 7.023872E-4 45.0 1 GCGTAAG 20 7.023872E-4 45.0 1 CCCGCTT 25 3.8830032E-5 45.0 40 ATCTGCG 20 7.023872E-4 45.0 44 CGCTTAT 20 7.023872E-4 45.0 35 CGTTTTT 1305 0.0 44.137928 1 TACGGCT 685 0.0 43.68613 7 ACGGCTG 720 0.0 41.562504 8 >>END_MODULE