SRR3551925_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551925_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	307951
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGC	6497	2.109751226656189	No Hit
GAATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC	5683	1.8454234602258153	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG	5157	1.674617065702011	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3615	1.17388805361892	No Hit
GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	2304	0.7481709752525564	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTATGCTCAT	1584	0.5143675454861325	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCT	1209	0.39259492581612015	No Hit
CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	1075	0.34908150972070234	No Hit
GAACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT	1015	0.3295978905735003	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTATGCTCATCGTA	968	0.31433572224152545	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTC	888	0.2883575633785895	No Hit
CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT	625	0.20295436611668738	No Hit
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	338	0.10975772119590453	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	323	0.10488681640910405	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAACAC	55	1.8189894E-12	45.000004	34
GCATAAG	20	7.025236E-4	45.0	1
TCCGATG	20	7.025236E-4	45.0	27
TAGCGAG	20	7.025236E-4	45.0	1
AATATCG	20	7.025236E-4	45.0	38
ATCCGAA	20	7.025236E-4	45.0	32
ATATCGG	20	7.025236E-4	45.0	39
GACGGGT	40	6.7866495E-9	45.0	4
CCAGTCG	20	7.025236E-4	45.0	10
CAATACG	20	7.025236E-4	45.0	1
GCCAATC	20	7.025236E-4	45.0	15
AGTCGAG	20	7.025236E-4	45.0	12
TATTGCG	30	2.1603082E-6	44.999996	1
CGTTTTT	1570	0.0	43.56688	1
GAATGAC	135	0.0	43.333332	1
TACGGCT	660	0.0	43.295452	7
TTACGGG	75	0.0	42.0	3
ACGGCTG	685	0.0	41.71533	8
GATGAAT	335	0.0	41.641792	20
TGAATGA	330	0.0	41.590908	22