##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551925_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 307951 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.11965215245282 33.0 31.0 34.0 30.0 34.0 2 32.212498092228955 33.0 31.0 34.0 30.0 34.0 3 32.20732194407552 33.0 31.0 34.0 30.0 34.0 4 35.80314075940653 37.0 35.0 37.0 35.0 37.0 5 35.841568950904524 37.0 35.0 37.0 35.0 37.0 6 35.74571928650987 37.0 35.0 37.0 35.0 37.0 7 35.88896610174995 37.0 35.0 37.0 35.0 37.0 8 35.24510068160194 37.0 35.0 37.0 32.0 37.0 9 37.04478959314956 39.0 37.0 39.0 33.0 39.0 10 36.84456293371348 39.0 35.0 39.0 33.0 39.0 11 37.145016577312624 39.0 37.0 39.0 34.0 39.0 12 37.11023182259515 39.0 37.0 39.0 34.0 39.0 13 37.20700371162945 39.0 37.0 39.0 34.0 39.0 14 38.297774645966406 40.0 38.0 41.0 34.0 41.0 15 38.26323018921841 40.0 38.0 41.0 34.0 41.0 16 38.434877626635405 40.0 38.0 41.0 34.0 41.0 17 38.30741579017441 40.0 37.0 41.0 34.0 41.0 18 38.178765452945434 40.0 37.0 41.0 34.0 41.0 19 38.095063825089056 40.0 37.0 41.0 34.0 41.0 20 38.041996941071794 40.0 36.0 41.0 34.0 41.0 21 38.03662270945702 40.0 36.0 41.0 34.0 41.0 22 38.10639354962316 40.0 36.0 41.0 34.0 41.0 23 38.13648924666587 40.0 36.0 41.0 34.0 41.0 24 37.9801851593273 40.0 36.0 41.0 34.0 41.0 25 37.80018899110573 40.0 35.0 41.0 34.0 41.0 26 37.88105899964605 40.0 36.0 41.0 34.0 41.0 27 37.913729781686044 40.0 36.0 41.0 34.0 41.0 28 37.76821961935503 40.0 35.0 41.0 34.0 41.0 29 37.83330789638612 40.0 36.0 41.0 34.0 41.0 30 37.50207338180425 40.0 35.0 41.0 33.0 41.0 31 37.39497842189179 40.0 35.0 41.0 33.0 41.0 32 37.33747901451854 40.0 35.0 41.0 33.0 41.0 33 37.18565940685369 40.0 35.0 41.0 33.0 41.0 34 37.03437884598524 40.0 35.0 41.0 32.0 41.0 35 36.94207844754523 40.0 35.0 41.0 32.0 41.0 36 36.8017866478758 40.0 35.0 41.0 31.0 41.0 37 36.75083048926615 40.0 35.0 41.0 31.0 41.0 38 36.5787251867992 40.0 35.0 41.0 31.0 41.0 39 36.51545538088852 40.0 35.0 41.0 31.0 41.0 40 36.43631291991258 39.0 35.0 41.0 30.0 41.0 41 36.22566577150261 39.0 35.0 41.0 30.0 41.0 42 36.422333423174464 39.0 35.0 41.0 31.0 41.0 43 36.345759552656105 39.0 35.0 41.0 30.0 41.0 44 36.434452234284024 39.0 35.0 41.0 31.0 41.0 45 36.42719133888183 39.0 35.0 41.0 31.0 41.0 46 36.312783527249465 39.0 35.0 41.0 30.0 41.0 47 36.21054323577452 39.0 35.0 41.0 30.0 41.0 48 36.245162379729244 39.0 35.0 41.0 30.0 41.0 49 36.24082077992927 39.0 35.0 41.0 31.0 41.0 50 36.147848196628686 39.0 35.0 41.0 30.0 41.0 51 35.31002659514014 38.0 35.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 7.0 11 5.0 12 8.0 13 7.0 14 10.0 15 14.0 16 19.0 17 40.0 18 76.0 19 106.0 20 265.0 21 588.0 22 940.0 23 1321.0 24 1756.0 25 2466.0 26 3436.0 27 4201.0 28 4051.0 29 3948.0 30 3912.0 31 4801.0 32 6356.0 33 9021.0 34 18127.0 35 22948.0 36 21468.0 37 32564.0 38 60886.0 39 104568.0 40 31.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.22375312955633 16.555880643349106 18.51820581845813 19.702160408636438 2 31.257245470870366 30.717224493507082 20.5600891050849 17.46544093053765 3 28.08044136891908 29.223155631902475 27.0520310049326 15.644371994245837 4 27.05820081766255 20.73122022659449 34.55387383057694 17.656705125166017 5 29.841111085854564 24.652623306954677 25.29038710703976 20.215878500151 6 23.081269422732838 35.153319846339194 26.599036859760155 15.166373871167815 7 67.41234806836152 6.011670687869175 20.6113959688392 5.964585274930102 8 65.60751548135904 12.449058454104712 14.730914983227853 7.2125110813083895 9 60.73920851044484 7.589194384820962 15.927858652837626 15.743738451896569 10 40.99710668255664 20.08955970267997 23.172517705738898 15.740815909024489 11 31.543654672334238 22.12170117973314 26.67437352046267 19.660270627469956 12 26.932531474163095 19.00756938603869 30.552587911713225 23.507311228084987 13 25.07834038532104 21.372231296537436 34.920490597530126 18.628937720611397 14 20.297709700569246 26.988709242704196 29.394611480397852 23.3189695763287 15 18.39351065591604 22.856883075554226 37.08122396095483 21.66838230757491 16 19.99506414981604 23.918740319076736 30.07004361083419 26.01615192027303 17 20.196719607989582 25.964845056518733 31.41701114787742 22.421424187614264 18 19.728138567499375 23.941795935067592 31.87747401372296 24.45259148371007 19 21.521605709999317 24.52468087455472 29.618348373604892 24.335365041841072 20 23.12705592772876 25.142961055492595 33.46701260914886 18.262970407629787 21 22.957548441148106 28.282421554078407 30.043091271013893 18.71693873375959 22 20.362655097726588 22.31913518709145 32.67337985588617 24.644829859295797 23 21.63168815818101 25.71318164253404 31.275105455088635 21.380024744196316 24 22.946182996645568 22.76920678939182 29.70310211689522 24.58150809706739 25 19.64306009722326 29.660887608742946 28.15935002646525 22.536702267568543 26 18.97217414458794 23.890489071313294 32.64512860812272 24.49220817597605 27 23.039379641566356 26.35776470932064 28.696448460956454 21.906407188156557 28 17.978834295066424 25.29363437689762 34.07295316462684 22.654578163409113 29 21.70345282203987 21.99895437910577 32.48276511522937 23.81482768362499 30 19.417374842101502 28.464268666118958 30.386652421976223 21.73170406980331 31 22.1275462654773 23.173816613682046 30.46588580650818 24.232751314332475 32 25.276423846650932 26.213910654617127 26.85492172456008 21.654743774171862 33 20.54417748278135 24.532799049199387 26.604557218518533 28.318466249500734 34 21.77911420972817 22.27919376783969 32.61817626830242 23.323515754129716 35 20.75070384574169 24.67990037376076 27.144253468896025 27.42514231160152 36 19.868420625359228 27.73623076398518 30.335670285207712 22.05967832544788 37 21.454062496955682 26.884471880266663 30.752295007972048 20.909170614805603 38 20.505534971472734 25.04197096291293 27.993739263714033 26.4587548019003 39 24.922471432143425 23.581348980844353 29.283554851258803 22.212624735753415 40 20.59970579735088 22.125922630548366 30.242148913301143 27.032222658799615 41 18.682192946280416 26.533766735617032 29.552753522475978 25.231286795626577 42 18.959834519128044 23.237787829882027 31.008504599757753 26.793873051232175 43 21.796649466960652 25.048790229614454 28.48115446937987 24.673405834045028 44 21.416394166604427 23.007881123945044 30.32592847563411 25.24979623381642 45 20.425976859954993 21.19590454325526 29.371231137421212 29.006887459368535 46 24.777967923468346 24.3347155878695 27.96548801595059 22.921828472711567 47 18.249331874226744 22.77602605609334 35.68424846810044 23.290393601579474 48 20.21880104302308 23.58005007290121 30.252215449860532 25.94893343421518 49 20.33570275790629 21.214738708430886 34.17751525405016 24.272043279612664 50 21.616750716834822 21.47516975103182 31.090011073190215 25.818068458943145 51 20.085338251864744 20.66822319135187 29.084821935957343 30.16161662082604 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 80.0 1 204.5 2 329.0 3 3226.0 4 6123.0 5 4030.0 6 1937.0 7 1842.5 8 1748.0 9 1704.5 10 1661.0 11 1587.5 12 1514.0 13 1466.5 14 1419.0 15 1309.5 16 1200.0 17 1151.0 18 1102.0 19 1037.0 20 972.0 21 1010.0 22 1048.0 23 1076.0 24 1104.0 25 1190.5 26 1710.5 27 2144.0 28 2391.5 29 2639.0 30 3079.5 31 3520.0 32 4128.5 33 4737.0 34 5276.0 35 5815.0 36 6209.5 37 6604.0 38 7169.5 39 7735.0 40 9416.0 41 11097.0 42 12978.0 43 14859.0 44 28893.5 45 42928.0 46 35840.0 47 28752.0 48 29069.0 49 29386.0 50 25453.5 51 21521.0 52 19129.0 53 16737.0 54 15702.0 55 14667.0 56 13748.0 57 12829.0 58 12652.5 59 12476.0 60 11494.5 61 10513.0 62 10155.5 63 9798.0 64 8643.0 65 7488.0 66 6569.0 67 5650.0 68 4935.5 69 4221.0 70 3963.5 71 3706.0 72 3042.0 73 2378.0 74 2078.5 75 1438.0 76 1097.0 77 847.0 78 597.0 79 508.0 80 419.0 81 303.5 82 188.0 83 140.5 84 93.0 85 61.5 86 30.0 87 22.0 88 14.0 89 11.5 90 9.0 91 6.5 92 4.0 93 5.5 94 7.0 95 3.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 307951.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.94082502456392 #Duplication Level Percentage of deduplicated Percentage of total 1 70.07376000689138 23.783612272071853 2 10.647225970097363 7.227512672961348 3 3.865685288596982 3.9361364394090304 4 2.212710380159868 3.0040486337216956 5 1.6581506162606081 2.8139499965437063 6 1.4036632707550907 2.858489367966337 7 1.2829398662446116 3.0480826262072056 8 1.0953859405741013 2.9742642034714355 9 1.0604690857162957 3.239387611403046 >10 6.58528338343659 32.983716629677886 >50 0.06783809570576464 1.5345358240490543 >100 0.03491666690737886 2.2283275061930334 >500 0.002992857163489616 0.8400669416296789 >1k 0.005985714326979232 3.657558687417892 >5k 0.002992857163489616 5.8703105872768 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGC 6497 2.109751226656189 No Hit GAATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC 5683 1.8454234602258153 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG 5157 1.674617065702011 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3615 1.17388805361892 No Hit GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 2304 0.7481709752525564 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTATGCTCAT 1584 0.5143675454861325 No Hit GAATGACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCT 1209 0.39259492581612015 No Hit CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 1075 0.34908150972070234 No Hit GAACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT 1015 0.3295978905735003 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTATGCTCATCGTA 968 0.31433572224152545 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTC 888 0.2883575633785895 No Hit CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 625 0.20295436611668738 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 338 0.10975772119590453 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 323 0.10488681640910405 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2065263629603411 0.0 2 0.0 0.0 0.0 1.4976408584482597 0.0 3 0.0 0.0 0.0 1.8645823523872305 0.0 4 0.0 0.0 0.0 2.5883988037057843 0.0 5 0.0 0.0 0.0 5.623946666839855 0.0 6 0.0 0.0 0.0 6.506879341193891 0.0 7 0.0 0.0 0.0 7.692132839315345 0.0 8 0.0 0.0 0.0 9.064104354264153 0.0 9 0.0 0.0 0.0 9.45897236898078 0.0 10 0.0 0.0 0.0 12.03600572818403 0.0 11 0.0 0.0 0.0 13.458959379901348 0.0 12 0.0 0.0 0.0 16.81014187322009 0.0 13 0.0 0.0 0.0 17.40666534611026 0.0 14 0.0 0.0 0.0 17.693074547574128 0.0 15 0.0 0.0 0.0 18.410721186162732 0.0 16 0.0 0.0 0.0 19.2514393523645 0.0 17 0.0 0.0 0.0 20.11521313455712 0.0 18 0.0 0.0 0.0 20.91209315767768 0.0 19 0.0 0.0 0.0 22.028504534812356 3.2472698578669984E-4 20 0.0 0.0 0.0 22.670165058726877 3.2472698578669984E-4 21 0.0 0.0 0.0 23.355014271751024 3.2472698578669984E-4 22 0.0 0.0 0.0 24.099937977145714 3.2472698578669984E-4 23 0.0 0.0 0.0 24.752314491591196 3.2472698578669984E-4 24 0.0 0.0 0.0 25.31149436111589 3.2472698578669984E-4 25 0.0 0.0 0.0 25.84891752259288 3.2472698578669984E-4 26 0.0 0.0 0.0 26.315874928154155 3.2472698578669984E-4 27 0.0 0.0 0.0 26.829593019668714 3.2472698578669984E-4 28 0.0 0.0 0.0 27.29817406015892 3.2472698578669984E-4 29 0.0 0.0 0.0 27.767079827634916 3.2472698578669984E-4 30 0.0 0.0 0.0 28.310023347870278 3.2472698578669984E-4 31 0.0 0.0 0.0 28.829586525129 3.2472698578669984E-4 32 0.0 0.0 0.0 29.3202490006527 3.2472698578669984E-4 33 0.0 0.0 0.0 29.810911476176404 3.2472698578669984E-4 34 0.0 0.0 0.0 30.290208507197573 3.2472698578669984E-4 35 0.0 0.0 0.0 30.804576052683707 3.2472698578669984E-4 36 0.0 0.0 0.0 31.260168013742447 3.2472698578669984E-4 37 0.0 0.0 0.0 31.762845387740256 3.2472698578669984E-4 38 0.0 0.0 0.0 32.24993586642031 3.2472698578669984E-4 39 0.0 0.0 0.0 32.73670161811457 3.2472698578669984E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACAC 55 1.8189894E-12 45.000004 34 GCATAAG 20 7.025236E-4 45.0 1 TCCGATG 20 7.025236E-4 45.0 27 TAGCGAG 20 7.025236E-4 45.0 1 AATATCG 20 7.025236E-4 45.0 38 ATCCGAA 20 7.025236E-4 45.0 32 ATATCGG 20 7.025236E-4 45.0 39 GACGGGT 40 6.7866495E-9 45.0 4 CCAGTCG 20 7.025236E-4 45.0 10 CAATACG 20 7.025236E-4 45.0 1 GCCAATC 20 7.025236E-4 45.0 15 AGTCGAG 20 7.025236E-4 45.0 12 TATTGCG 30 2.1603082E-6 44.999996 1 CGTTTTT 1570 0.0 43.56688 1 GAATGAC 135 0.0 43.333332 1 TACGGCT 660 0.0 43.295452 7 TTACGGG 75 0.0 42.0 3 ACGGCTG 685 0.0 41.71533 8 GATGAAT 335 0.0 41.641792 20 TGAATGA 330 0.0 41.590908 22 >>END_MODULE