##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551916_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 373732 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.060104566908905 33.0 31.0 34.0 30.0 34.0 2 32.15248894930057 33.0 31.0 34.0 30.0 34.0 3 32.14683784101977 33.0 31.0 34.0 30.0 34.0 4 35.77000899039954 37.0 35.0 37.0 35.0 37.0 5 35.79855886035983 37.0 35.0 37.0 35.0 37.0 6 35.69859417978658 37.0 35.0 37.0 35.0 37.0 7 35.84723545214218 37.0 35.0 37.0 35.0 37.0 8 35.24262038037952 37.0 35.0 37.0 32.0 37.0 9 37.03244570975993 39.0 37.0 39.0 33.0 39.0 10 36.81431614097803 39.0 35.0 39.0 33.0 39.0 11 37.08951601682489 39.0 37.0 39.0 34.0 39.0 12 37.08389166568557 39.0 37.0 39.0 34.0 39.0 13 37.1706731026511 39.0 37.0 39.0 34.0 39.0 14 38.2769926043261 40.0 38.0 41.0 34.0 41.0 15 38.229201673926774 40.0 38.0 41.0 33.0 41.0 16 38.42792161227832 40.0 38.0 41.0 34.0 41.0 17 38.28502509819871 40.0 37.0 41.0 34.0 41.0 18 38.15639014052851 40.0 37.0 41.0 34.0 41.0 19 38.09071473676324 40.0 37.0 41.0 34.0 41.0 20 38.022315455995205 40.0 36.0 41.0 34.0 41.0 21 38.04426166343797 40.0 36.0 41.0 34.0 41.0 22 38.106806481649954 40.0 37.0 41.0 34.0 41.0 23 38.11610726402877 40.0 36.0 41.0 34.0 41.0 24 37.97026746438625 40.0 36.0 41.0 34.0 41.0 25 37.77179101602218 40.0 36.0 41.0 33.0 41.0 26 37.846676227885226 40.0 36.0 41.0 33.0 41.0 27 37.8780008134171 40.0 36.0 41.0 34.0 41.0 28 37.72645371549667 40.0 36.0 41.0 33.0 41.0 29 37.767424250532464 40.0 36.0 41.0 33.0 41.0 30 37.4542292337825 40.0 36.0 41.0 33.0 41.0 31 37.36871608532317 39.0 35.0 41.0 33.0 41.0 32 37.28742521378956 40.0 35.0 41.0 33.0 41.0 33 37.119387689574346 40.0 35.0 41.0 32.0 41.0 34 36.96968683441611 40.0 35.0 41.0 31.0 41.0 35 36.898892789485515 40.0 35.0 41.0 31.0 41.0 36 36.80726563419777 40.0 35.0 41.0 31.0 41.0 37 36.76761957766528 40.0 35.0 41.0 31.0 41.0 38 36.554488242912036 40.0 35.0 41.0 30.0 41.0 39 36.5154683034902 40.0 35.0 41.0 31.0 41.0 40 36.36894352102576 39.0 35.0 41.0 30.0 41.0 41 36.22653131120696 39.0 35.0 41.0 30.0 41.0 42 36.43791540462149 39.0 35.0 41.0 30.0 41.0 43 36.37331028651547 39.0 35.0 41.0 30.0 41.0 44 36.51257853221025 39.0 35.0 41.0 31.0 41.0 45 36.50883520811705 39.0 35.0 41.0 31.0 41.0 46 36.40226151359798 39.0 35.0 41.0 31.0 41.0 47 36.32037930923764 39.0 35.0 41.0 30.0 41.0 48 36.240479809061036 39.0 35.0 41.0 30.0 41.0 49 36.2704852675179 39.0 35.0 41.0 30.0 41.0 50 36.16929243415068 39.0 35.0 41.0 30.0 41.0 51 35.36566577119433 38.0 35.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 9.0 11 9.0 12 8.0 13 10.0 14 15.0 15 27.0 16 34.0 17 54.0 18 85.0 19 170.0 20 471.0 21 916.0 22 1425.0 23 1801.0 24 2274.0 25 2964.0 26 4137.0 27 4729.0 28 4700.0 29 4434.0 30 5081.0 31 6141.0 32 7834.0 33 10872.0 34 21035.0 35 26313.0 36 25998.0 37 39799.0 38 76970.0 39 125378.0 40 33.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.66365202872647 16.197168024145643 19.040114306508407 18.09906564061948 2 30.175098733852064 32.382027763210004 20.803945072939968 16.638928429997968 3 28.58492181563259 30.46915971872893 25.508385688140166 15.437532777498314 4 26.744298053150384 21.750345167125108 34.153885672085885 17.351471107638627 5 30.55612042854238 24.451746171053053 24.308327892714566 20.683805507690003 6 23.16285466591033 36.67146511403894 25.32831012597262 14.837370094078109 7 68.95128059679129 5.688835850288442 19.98410625796025 5.375777294960025 8 67.16042511746384 12.587094495520853 13.30552374428735 6.946956642727945 9 62.3235366519324 7.261085483715604 14.297143407575483 16.118234456776513 10 41.36627315830595 21.417218755685894 21.591942889557224 15.624565196450932 11 32.540965183607504 22.574465124741792 25.836160671283164 19.048409020367536 12 27.95024241970182 18.404899767748013 29.967195744544217 23.67766206800595 13 25.90947523894127 20.48178908950799 34.32165294917213 19.287082722378603 14 20.156422249098284 28.132993696017465 28.118544839617694 23.592039215266556 15 17.59308809521261 24.056275619962967 36.98612909785622 21.3645071869682 16 20.06223711108495 23.066528956578512 30.84349212804898 26.02774180428756 17 19.550908137381867 25.553605257243156 31.502252951312705 23.39323365406227 18 19.62208213372149 24.343112176639945 30.571639570601395 25.463166119037172 19 22.045744009076024 26.014095662132224 27.53684458381942 24.403315744972335 20 25.407778836171374 25.085890424154204 31.680990656406195 17.825340083268223 21 23.769974206115613 28.48779339205634 28.39146768272452 19.350764719103527 22 20.90428435349395 22.606841265933877 31.05861954555671 25.430254835015464 23 22.784508685368124 27.43570258902101 29.197392784134085 20.58239594147678 24 23.846499630751445 23.67204306829493 27.704611860905676 24.77684544004795 25 20.164716962957414 30.789175130842423 26.022657947406163 23.023449958794 26 20.068123682210782 25.932753952029795 30.271692014598695 23.727430351160724 27 24.75196129847056 27.531493155523208 26.516059636316935 21.200485909689295 28 20.480451232433936 27.08571917844873 30.353033724701124 22.080795864416213 29 23.63378035597701 26.488232209176633 27.788094142326585 22.089893292519776 30 21.47768989543309 30.876670983485493 27.036753609538383 20.608885511543033 31 27.273554311645775 25.11719627968705 23.225466376976016 24.38378303169116 32 27.72949600248306 28.66198238309805 23.682745924887353 19.925775689531537 33 24.168655614183425 27.65457600633609 24.084905761347702 24.09186261813278 34 26.93026018644376 26.0159686620359 24.964413001830188 22.089358149690153 35 23.082583241467148 26.42669078377019 24.35943403294339 26.131291941819274 36 23.382798368884654 29.963717316151683 25.728329391114492 20.925154923849178 37 24.731090728115333 27.55370158295249 27.641465007010368 20.073742681921804 38 24.52907430993332 26.44140721158477 23.958879624971903 25.07063885351 39 28.660912097438807 24.16276904305759 26.103196943264155 21.073121916239444 40 22.369237849582053 25.485106975051643 28.096603983603224 24.049051191763084 41 22.260871426583755 25.954694808044266 27.775250714415677 24.009183050956302 42 21.361831472820096 24.429805315038582 29.34295163379106 24.865411578350262 43 24.195412755664485 24.45415431378635 27.913049993043142 23.437382937506023 44 23.211820234820674 24.470476170089796 28.586794815536265 23.73090877955326 45 22.79628182761979 22.27157428317618 26.32153521774962 28.61060867145441 46 26.787377050934897 25.629863110464186 25.51453983068081 22.068220007920115 47 19.790116982222557 25.210043560626332 33.26501343208502 21.73482602506609 48 23.2527586612867 24.155009472028084 27.05039975169373 25.541832114991493 49 21.62993803046033 21.59167531814241 33.0247343015851 23.753652349812164 50 22.1182558624897 22.542624126379334 30.061648453972367 25.277471557158606 51 20.91418449584194 22.144745432555947 27.27783545428275 29.66323461731936 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 107.0 1 271.5 2 436.0 3 3048.5 4 5661.0 5 3803.0 6 1945.0 7 1865.5 8 1786.0 9 1751.0 10 1716.0 11 1625.0 12 1534.0 13 1448.0 14 1362.0 15 1261.0 16 1160.0 17 1128.5 18 1097.0 19 1108.5 20 1120.0 21 1073.0 22 1026.0 23 1096.0 24 1166.0 25 1476.0 26 1976.0 27 2166.0 28 2759.0 29 3352.0 30 3858.5 31 4365.0 32 4866.5 33 5368.0 34 5895.5 35 6423.0 36 7140.5 37 7858.0 38 8463.0 39 9068.0 40 10998.5 41 12929.0 42 13915.0 43 14901.0 44 17248.5 45 19596.0 46 36712.0 47 53828.0 48 43942.5 49 34057.0 50 34611.0 51 35165.0 52 31154.5 53 27144.0 54 23919.5 55 20695.0 56 19505.0 57 18315.0 58 18204.5 59 18094.0 60 17263.5 61 16433.0 62 15155.0 63 13877.0 64 11908.0 65 9939.0 66 7951.0 67 5963.0 68 5015.0 69 4067.0 70 3546.0 71 3025.0 72 2603.0 73 2181.0 74 1845.5 75 1112.0 76 714.0 77 556.0 78 398.0 79 323.5 80 249.0 81 175.0 82 101.0 83 64.0 84 27.0 85 16.5 86 6.0 87 8.5 88 11.0 89 5.5 90 0.0 91 0.0 92 0.0 93 1.0 94 2.0 95 2.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 373732.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.82520367934147 #Duplication Level Percentage of deduplicated Percentage of total 1 72.94284157879575 24.67306473352704 2 9.344804290021557 6.321798169071262 3 3.5776436198132746 3.6304357239684157 4 2.0436517072067466 2.765077409836085 5 1.45882931693354 2.467259938933579 6 1.1446728936067156 2.3231276263480996 7 1.0118931735157428 2.3959244887133653 8 0.8889018539115381 2.405382900760161 9 0.7992800194894477 2.4332228510452727 >10 6.682021880419196 37.170713064883074 >50 0.0626414559145172 1.4759603301202433 >100 0.03330305251151547 2.0518074732727354 >500 0.0015858596434054986 0.4149210668173753 >1k 0.005550508751919246 3.501751421052134 >5k 0.002378789465108248 5.969552801651146 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGC 8064 2.157695889032783 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTC 7675 2.0536106086714545 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCG 6518 1.7440304817355752 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3082 0.8246551004463091 No Hit GCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 2760 0.7384971048772918 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGGAGCTT 1845 0.49366926032558095 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCT 1459 0.3903866942086843 No Hit GAACTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCT 1440 0.38530283732728265 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTA 1239 0.33152098295034943 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTC 1231 0.32938041163186454 No Hit CCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 960 0.25686855821818844 No Hit CTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGCT 587 0.1570644204938298 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATG 441 0.1179989939314803 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTT 407 0.10890156582791946 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 406 0.10863399441310886 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.16214827737523144 0.0 2 0.0 0.0 0.0 1.3426733595196558 0.0 3 0.0 0.0 0.0 1.6305802018558753 0.0 4 0.0 0.0 0.0 2.377372020592296 0.0 5 0.0 0.0 0.0 5.5125062879282485 0.0 6 0.0 0.0 0.0 6.410208384617855 0.0 7 0.0 0.0 0.0 7.494675328845269 0.0 8 0.0 0.0 0.0 8.778750548521401 0.0 9 0.0 0.0 0.0 9.168602099900463 0.0 10 0.0 0.0 0.0 11.772607108837349 0.0 11 0.0 0.0 0.0 13.029122472787988 0.0 12 0.0 0.0 0.0 16.275834020099964 0.0 13 0.0 0.0 0.0 16.84067727676517 0.0 14 0.0 0.0 0.0 17.0809564072651 0.0 15 0.0 0.0 0.0 17.73195765949932 0.0 16 0.0 0.0 0.0 18.40382948208877 0.0 17 0.0 0.0 0.0 19.144467158284545 0.0 18 0.0 0.0 0.0 19.850320550554944 0.0 19 0.0 0.0 0.0 20.85210792760588 0.0 20 0.0 0.0 0.0 21.41641604144146 0.0 21 0.0 0.0 0.0 22.00534072543962 0.0 22 0.0 0.0 0.0 22.658750120407138 0.0 23 0.0 0.0 0.0 23.226001519805635 0.0 24 0.0 0.0 0.0 23.723684351353377 0.0 25 0.0 0.0 0.0 24.14832018665782 0.0 26 0.0 0.0 0.0 24.56278830819946 0.0 27 0.0 0.0 0.0 24.98581871501504 0.0 28 0.0 0.0 0.0 25.399751693727055 0.0 29 0.0 0.0 0.0 25.82144424346858 0.0 30 0.0 0.0 0.0 26.263472220735714 0.0 31 0.0 0.0 0.0 26.719413911573 0.0 32 0.0 0.0 0.0 27.192747744372973 0.0 33 0.0 0.0 0.0 27.61390515128488 0.0 34 0.0 0.0 0.0 28.03506255819678 0.0 35 0.0 0.0 0.0 28.458092965012362 0.0 36 0.0 0.0 0.0 28.92420236961245 0.0 37 0.0 0.0 0.0 29.380946774694166 0.0 38 0.0 0.0 0.0 29.802104181606072 0.0 39 0.0 0.0 0.0 30.21202358909593 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCACGT 20 7.02717E-4 45.0 45 CTCACGA 20 7.02717E-4 45.0 24 CAAACGA 25 3.885736E-5 45.0 15 CGCGGTC 20 7.02717E-4 45.0 32 ATAGCGG 40 6.7939254E-9 45.0 2 CACTAGG 25 3.885736E-5 45.0 2 AGCGCGT 20 7.02717E-4 45.0 21 CAAGCGC 20 7.02717E-4 45.0 25 TTAGTAG 25 3.885736E-5 45.0 1 CGTAAGC 25 3.885736E-5 45.0 43 ACGTAAG 20 7.02717E-4 45.0 1 TCATACT 20 7.02717E-4 45.0 40 CACCGCT 20 7.02717E-4 45.0 38 TCGCGCG 20 7.02717E-4 45.0 29 AGAGCGT 20 7.02717E-4 45.0 29 ATCACGG 30 2.161556E-6 44.999996 2 GCATATT 60 0.0 44.999996 27 CGTTTTT 1715 0.0 43.03207 1 TACGGCT 1025 0.0 42.58536 7 TGATACC 795 0.0 42.452827 4 >>END_MODULE