##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551913_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 544546 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01180616513573 33.0 31.0 34.0 30.0 34.0 2 32.11952341950909 33.0 31.0 34.0 30.0 34.0 3 32.1319466124074 33.0 31.0 34.0 30.0 34.0 4 35.73829575462862 37.0 35.0 37.0 35.0 37.0 5 35.782264491888654 37.0 35.0 37.0 35.0 37.0 6 35.688694802642935 37.0 35.0 37.0 35.0 37.0 7 35.845100322103185 37.0 35.0 37.0 35.0 37.0 8 35.20260363679102 37.0 35.0 37.0 32.0 37.0 9 37.01209080591906 39.0 37.0 39.0 32.0 39.0 10 36.777574346336216 39.0 35.0 39.0 32.0 39.0 11 37.04791881677581 39.0 37.0 39.0 34.0 39.0 12 37.06017489798842 39.0 37.0 39.0 33.0 39.0 13 37.20304253451499 39.0 37.0 39.0 34.0 39.0 14 38.28429737799929 40.0 38.0 41.0 34.0 41.0 15 38.28004429377867 40.0 38.0 41.0 34.0 41.0 16 38.42773245970037 40.0 38.0 41.0 34.0 41.0 17 38.31987013034711 40.0 38.0 41.0 34.0 41.0 18 38.214549367730186 40.0 37.0 41.0 34.0 41.0 19 38.13641455450963 40.0 37.0 41.0 34.0 41.0 20 38.1401461033595 40.0 37.0 41.0 34.0 41.0 21 38.098961336599665 40.0 37.0 41.0 34.0 41.0 22 38.21638759627286 40.0 37.0 41.0 34.0 41.0 23 38.21671080129135 40.0 37.0 41.0 34.0 41.0 24 38.08629390354534 40.0 37.0 41.0 34.0 41.0 25 37.85064622639777 40.0 36.0 41.0 33.0 41.0 26 37.957689524851894 40.0 36.0 41.0 34.0 41.0 27 38.00669915856512 40.0 37.0 41.0 34.0 41.0 28 37.846991806018224 40.0 36.0 41.0 33.0 41.0 29 37.912022124852626 40.0 36.0 41.0 34.0 41.0 30 37.5756869024839 40.0 36.0 41.0 33.0 41.0 31 37.47778149137079 40.0 36.0 41.0 33.0 41.0 32 37.467624406386236 40.0 36.0 41.0 33.0 41.0 33 37.41318272469176 40.0 36.0 41.0 33.0 41.0 34 37.22118425257003 40.0 36.0 41.0 33.0 41.0 35 37.20091782879683 40.0 36.0 41.0 32.0 41.0 36 37.000124874666234 40.0 35.0 41.0 31.0 41.0 37 37.00150951434773 40.0 35.0 41.0 32.0 41.0 38 36.83672637389679 40.0 35.0 41.0 31.0 41.0 39 36.744117117745795 39.0 35.0 41.0 31.0 41.0 40 36.61716365559567 39.0 35.0 41.0 31.0 41.0 41 36.36057927153996 39.0 35.0 41.0 30.0 41.0 42 36.59080591905918 39.0 35.0 41.0 31.0 41.0 43 36.482012538885606 39.0 35.0 41.0 31.0 41.0 44 36.60231091588222 39.0 35.0 41.0 31.0 41.0 45 36.552434505073954 39.0 35.0 41.0 31.0 41.0 46 36.42589974033415 39.0 35.0 41.0 31.0 41.0 47 36.254591898572386 39.0 35.0 41.0 30.0 41.0 48 36.21651798011555 39.0 35.0 41.0 30.0 41.0 49 36.16413489402181 39.0 35.0 41.0 31.0 41.0 50 36.00439265002406 39.0 35.0 40.0 30.0 41.0 51 35.10602777359488 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 12.0 11 9.0 12 8.0 13 13.0 14 25.0 15 32.0 16 36.0 17 57.0 18 128.0 19 248.0 20 494.0 21 1137.0 22 1653.0 23 2227.0 24 2880.0 25 3870.0 26 5179.0 27 6002.0 28 6221.0 29 6384.0 30 7243.0 31 9034.0 32 11751.0 33 16410.0 34 30459.0 35 38389.0 36 39816.0 37 62777.0 38 119812.0 39 172169.0 40 65.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.94883444190206 16.690784616910236 19.637826740073383 16.722554201114324 2 29.794177167769114 31.405244001425043 21.29039603633118 17.510182794474662 3 29.685646391673064 29.606681529200472 24.976402360865748 15.731269718260716 4 27.243428470689345 21.97720670062768 32.46998417029967 18.309380658383315 5 30.457482012538883 25.38426505749744 23.77136183169099 20.386891098272688 6 24.06959191693631 36.39563967047779 24.287571665203675 15.247196747382223 7 70.45869403135823 6.122898708281761 17.947795043944865 5.470612216415143 8 68.66729348852071 12.326782310401692 12.486548427497402 6.519375773580194 9 63.00294190022514 8.35540064567548 13.778633944607066 14.86302350949231 10 40.74641995350255 22.278191374098792 21.495888317974973 15.479500354423687 11 30.387882750033974 22.55438475353781 27.084580549668896 19.97315194675932 12 26.359022010996313 20.031732856361078 30.331505511012846 23.277739621629763 13 25.538705637356625 21.771530779768835 32.989315870468246 19.700447712406298 14 20.359896133659966 27.506767105074687 28.396682741219294 23.736654020046057 15 18.22876304297525 24.505735052686088 35.43998119534438 21.82552070899428 16 20.528476933078196 24.585434472018893 29.510454580512942 25.37563401438997 17 20.222166722370563 26.623646119887024 30.406797589184386 22.747389568558027 18 19.946891539006806 25.326418704755888 30.539568741667374 24.187121014569936 19 21.549510968770317 26.42935583036144 27.50933805408542 24.511795146782823 20 23.595802742100762 26.079339486471298 32.265226445516085 18.05963132591186 21 23.35450081352172 29.438468008212347 28.031424342479788 19.17560683578614 22 21.135404538826837 23.073349175276288 30.918967359965915 24.87227892593096 23 21.591380709802294 27.075031310486164 30.263375362228352 21.07021261748319 24 22.830945411406933 23.948573674216686 29.123343115182188 24.09713779919419 25 20.333635725907452 30.556463549452207 26.283362654394672 22.82653807024567 26 21.156890326987988 25.051143521392135 29.366848714341852 24.425117437278026 27 24.399775225600777 26.43064130486681 27.22947189034535 21.940111579187064 28 19.481733407278725 26.218170733051018 30.722106121429594 23.577989738240664 29 24.677254079545165 23.40702162902675 28.18843587134971 23.727288420078377 30 24.54613567999765 26.506484300683503 27.533394791257304 21.41398522806154 31 23.869608811744094 25.214031505143737 23.958490191829522 26.95786949128265 32 25.03002501166109 29.16906927973027 24.17004256757005 21.63086314103859 33 24.494349421352833 24.485534739030314 24.932879866898297 26.08723597271856 34 23.75446702390615 26.79314511538052 25.499223206120327 23.953164654593 35 25.18262919936975 23.889074568539666 24.695250722620308 26.233045509470276 36 24.586352668094154 25.6382380919151 26.060608286535942 23.714800953454805 37 22.90183014841721 27.398970885838846 27.871841864599133 21.827357101144806 38 22.578625129924745 24.932145310038088 25.178038218993436 27.311191341043735 39 23.580009769606242 27.570489912697916 27.398603607408738 21.4508967102871 40 24.640709875749707 23.324383982253106 28.38713350203656 23.647772639960625 41 20.675021026690125 27.118186526023514 27.21422983549599 24.992562611790373 42 20.761515096979867 23.47276446801556 29.805011881457215 25.960708553547356 43 23.7252683887128 23.688724184917344 28.46389469392852 24.122112732441337 44 23.10768970849111 23.650527228186416 28.23563114961821 25.00615191370426 45 22.723883749031305 22.28259871526005 26.0506917689231 28.94282576678554 46 25.596368350883118 26.000558263213758 25.581493574463863 22.821579811439253 47 20.159913028467752 23.59800641268139 33.479448935443465 22.76263162340739 48 21.840028206983433 24.733631318566292 27.461775497386814 25.964564977063464 49 21.333551251868528 21.86316674808005 32.7874963731255 24.01578562692592 50 22.023300143605866 21.806422230628815 30.702640364634025 25.467637261131294 51 20.727909120625256 22.231730652690498 27.36609946634444 29.674260760339806 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 121.0 1 383.5 2 646.0 3 3742.5 4 6839.0 5 4670.5 6 2502.0 7 2380.5 8 2259.0 9 2195.0 10 2131.0 11 2034.0 12 1937.0 13 1844.5 14 1752.0 15 1717.0 16 1682.0 17 1555.0 18 1428.0 19 1346.0 20 1264.0 21 1288.0 22 1312.0 23 1572.0 24 1832.0 25 2238.0 26 3357.0 27 4070.0 28 4701.5 29 5333.0 30 6683.5 31 8034.0 32 8648.5 33 9263.0 34 10221.0 35 11179.0 36 12411.5 37 13644.0 38 14447.5 39 15251.0 40 17352.5 41 19454.0 42 21056.0 43 22658.0 44 24935.5 45 27213.0 46 29353.5 47 31494.0 48 53879.0 49 76264.0 50 63792.0 51 51320.0 52 50632.5 53 49945.0 54 43868.0 55 37791.0 56 33953.0 57 30115.0 58 26637.5 59 23160.0 60 22203.0 61 21246.0 62 19311.0 63 17376.0 64 15177.5 65 12979.0 66 11219.5 67 9460.0 68 8040.0 69 6620.0 70 5686.0 71 4752.0 72 3796.0 73 2840.0 74 2395.5 75 1627.0 76 1303.0 77 994.0 78 685.0 79 608.5 80 532.0 81 359.0 82 186.0 83 115.5 84 45.0 85 35.5 86 26.0 87 16.0 88 6.0 89 4.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 544546.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.54448331598142 #Duplication Level Percentage of deduplicated Percentage of total 1 72.61312324208879 22.905434546313728 2 9.959290768736137 6.283213629868096 3 3.521861851919649 3.332859372872124 4 1.866233608340999 2.354774996881458 5 1.2393279457336044 1.9546979853611608 6 0.8977807010301591 1.6992017007033573 7 0.7770786618159155 1.7158781418000117 8 0.681272759522038 1.719231775710044 9 0.6659330900557271 1.8905863723940555 >10 7.66578076572009 42.988818223354734 >50 0.06259310801538084 1.349649857698413 >100 0.0391938152993506 2.4614409969700746 >500 0.0035098939074045313 0.6875574746765497 >1k 0.005264840861106797 3.5974055203487216 >5k 0.0011699646358015103 3.196422591612237 >10k+ 5.849823179007551E-4 1.8628268134352577 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGC 10095 1.853837875955383 No Hit GAATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC 9149 1.6801151785156807 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCG 8173 1.5008833046244028 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4016 0.7374950876509972 No Hit GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 3856 0.708112813242591 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGCAGACTT 2201 0.4041899123306387 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCT 2010 0.3691148222556037 No Hit GAACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCT 1791 0.3288978341590977 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTC 1676 0.30777932442805567 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTA 1654 0.3037392616968998 No Hit CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 1188 0.21816338748241654 No Hit CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT 1103 0.2025540542029507 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 951 0.17464089351496476 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 636 0.11679454077341493 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATG 560 0.10283796042942193 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 554 0.10173612513910671 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.21155237574052513 0.0 2 0.0 0.0 0.0 1.3352407326470124 0.0 3 0.0 0.0 0.0 1.6303489512364429 0.0 4 0.0 0.0 0.0 2.358845717349866 0.0 5 0.0 0.0 0.0 5.118024923514267 0.0 6 0.0 0.0 0.0 5.962948951971 0.0 7 0.0 0.0 0.0 7.0524804148777145 0.0 8 0.0 0.0 0.0 8.40094317100851 0.0 9 0.0 0.0 0.0 8.773179859920006 0.0 10 0.0 0.0 0.0 11.090890393098103 0.0 11 0.0 0.0 0.0 12.360204647541254 0.0 12 0.0 0.0 0.0 15.34599464508049 0.0 13 0.0 0.0 0.0 15.888832164775796 0.0 14 0.0 0.0 0.0 16.137479661956935 0.0 15 0.0 0.0 0.0 16.805375487103017 0.0 16 0.0 0.0 0.0 17.521752065022973 0.0 17 0.0 0.0 0.0 18.318746258350995 0.0 18 0.0 0.0 0.0 19.060097769518094 0.0 19 0.0 0.0 0.0 20.003268778027934 0.0 20 0.0 0.0 0.0 20.544820823217872 0.0 21 0.0 0.0 0.0 21.178376115149135 0.0 22 0.0 0.0 0.0 21.86224855200479 0.0 23 0.0 0.0 0.0 22.506271279194046 0.0 24 0.0 0.0 0.0 23.01219731666379 0.0 25 0.0 0.0 0.0 23.520327024714167 0.0 26 0.0 0.0 0.0 23.964917564356362 0.0 27 0.0 0.0 0.0 24.443848637213385 0.0 28 0.0 0.0 0.0 24.889357372930846 0.0 29 0.0 0.0 0.0 25.32164408516452 0.0 30 0.0 0.0 0.0 25.814899016795643 0.0 31 0.0 0.0 0.0 26.28776999555593 0.0 32 0.0 0.0 0.0 26.78102492718705 0.0 33 0.0 0.0 0.0 27.252610431441973 0.0 34 0.0 0.0 0.0 27.72401229648184 0.0 35 0.0 0.0 0.0 28.202208812478652 0.0 36 0.0 0.0 0.0 28.64973757956169 0.0 37 0.0 0.0 0.0 29.130137766139132 0.0 38 0.0 0.0 0.0 29.580788399878063 0.0 39 0.0 0.0 0.0 30.031439033616994 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTGTAC 20 7.030011E-4 45.000004 8 TATTGCG 20 7.030011E-4 45.000004 1 AACGCAC 20 7.030011E-4 45.000004 38 TGCGTCG 20 7.030011E-4 45.000004 1 TCGCAAC 25 3.8880928E-5 45.0 16 CGCTAGG 45 3.8380676E-10 45.0 2 TATAGCG 25 3.8880928E-5 45.0 1 CTAGGCG 25 3.8880928E-5 45.0 1 GCGTACT 25 3.8880928E-5 45.0 20 TCGATGG 30 2.1633896E-6 44.999996 2 TACGGCT 1035 0.0 43.04348 7 CGTTTTT 2215 0.0 42.866817 1 CGAATAT 160 0.0 42.187504 14 GACCTAT 145 0.0 41.896553 33 CGAAAGG 70 0.0 41.785717 2 ATAGCGG 70 0.0 41.785717 2 ACGGCTG 1070 0.0 41.635513 8 TACGAAT 165 0.0 40.909092 12 TCGTACG 50 1.0786607E-9 40.5 30 CGGGAAC 45 1.9250365E-8 40.0 6 >>END_MODULE