##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551912_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 397596 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01556102174066 33.0 31.0 34.0 30.0 34.0 2 32.110687733277 33.0 31.0 34.0 30.0 34.0 3 32.11177174820672 33.0 31.0 34.0 30.0 34.0 4 35.729157234982246 37.0 35.0 37.0 35.0 37.0 5 35.765088179961566 37.0 35.0 37.0 35.0 37.0 6 35.671525870481595 37.0 35.0 37.0 35.0 37.0 7 35.809319007233476 37.0 35.0 37.0 35.0 37.0 8 35.16944586967676 37.0 35.0 37.0 32.0 37.0 9 36.91506705298846 39.0 37.0 39.0 32.0 39.0 10 36.71243674483647 38.0 35.0 39.0 32.0 39.0 11 37.04556383867041 39.0 37.0 39.0 34.0 39.0 12 37.049912473968554 39.0 37.0 39.0 33.0 39.0 13 37.14271018823127 39.0 37.0 39.0 33.0 39.0 14 38.20475055081037 40.0 37.0 41.0 33.0 41.0 15 38.14326602883329 40.0 37.0 41.0 33.0 41.0 16 38.350141852533724 40.0 38.0 41.0 34.0 41.0 17 38.217756214851256 40.0 37.0 41.0 34.0 41.0 18 38.058999587521 40.0 37.0 41.0 34.0 41.0 19 38.006290304731436 40.0 37.0 41.0 34.0 41.0 20 37.93037153291281 40.0 36.0 41.0 34.0 41.0 21 37.965198342035634 40.0 36.0 41.0 34.0 41.0 22 38.06411784826809 40.0 36.0 41.0 34.0 41.0 23 38.066331150212775 40.0 36.0 41.0 34.0 41.0 24 37.892101530196484 40.0 36.0 41.0 33.0 41.0 25 37.7156208814978 39.0 36.0 41.0 33.0 41.0 26 37.807452791275566 40.0 36.0 41.0 33.0 41.0 27 37.831809173130516 40.0 36.0 41.0 34.0 41.0 28 37.66238342438053 40.0 36.0 41.0 33.0 41.0 29 37.77266622400628 40.0 36.0 41.0 33.0 41.0 30 37.418387005905494 40.0 35.0 41.0 33.0 41.0 31 37.26088039115081 39.0 35.0 41.0 33.0 41.0 32 37.20585468666687 40.0 35.0 41.0 33.0 41.0 33 37.107226933872575 40.0 35.0 41.0 32.0 41.0 34 36.932549623235644 40.0 35.0 41.0 31.0 41.0 35 36.83481976679846 40.0 35.0 41.0 31.0 41.0 36 36.70552520649101 40.0 35.0 41.0 31.0 41.0 37 36.72994949647381 40.0 35.0 41.0 31.0 41.0 38 36.46410929687421 39.0 35.0 41.0 30.0 41.0 39 36.396266562037844 39.0 35.0 41.0 30.0 41.0 40 36.278815682250325 39.0 35.0 41.0 30.0 41.0 41 36.1881281501826 39.0 35.0 41.0 29.0 41.0 42 36.321124961015705 39.0 35.0 41.0 30.0 41.0 43 36.28267890019014 39.0 35.0 41.0 30.0 41.0 44 36.40678729162265 39.0 35.0 41.0 30.0 41.0 45 36.400197688105514 39.0 35.0 41.0 31.0 41.0 46 36.298126741717724 39.0 35.0 41.0 30.0 41.0 47 36.16378434390688 39.0 35.0 41.0 30.0 41.0 48 36.17794947635288 39.0 35.0 41.0 30.0 41.0 49 36.22967031861487 39.0 35.0 41.0 30.0 41.0 50 36.12020493163915 39.0 35.0 41.0 30.0 41.0 51 35.2936322297005 38.0 35.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 8.0 11 4.0 12 8.0 13 13.0 14 14.0 15 20.0 16 33.0 17 59.0 18 81.0 19 169.0 20 394.0 21 855.0 22 1480.0 23 2000.0 24 2606.0 25 3363.0 26 4483.0 27 5126.0 28 5159.0 29 5137.0 30 5525.0 31 6677.0 32 8727.0 33 12089.0 34 22896.0 35 28756.0 36 28262.0 37 43174.0 38 81285.0 39 129128.0 40 60.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.887554200746486 15.556494532138151 17.789414380426365 18.766536886689 2 30.230686425416753 32.20178271411181 20.121429793056265 17.446101067415164 3 27.650177567178748 31.573758287306713 26.018118894556284 14.75794525095826 4 25.44014527309128 20.626465054980432 36.67516775822695 17.258221913701345 5 31.36450064889989 23.367689815792918 24.709252608175134 20.558556927132063 6 22.768337709634906 36.38240827372508 26.116962947313354 14.732291069326653 7 65.80222135031539 5.312176178834798 22.884536061731005 6.001066409118804 8 63.304208291833916 13.398273624483142 15.60050905944728 7.697009024235656 9 58.680419320113884 6.857463354762121 16.41943077898168 18.042686546142313 10 40.18023320154126 19.326653185645732 23.94415436775018 16.54895924506283 11 31.19347277135585 21.158160544874697 27.294288674936368 20.35407800883309 12 25.83501846095031 17.153593094497932 32.30213583637662 24.709252608175134 13 24.33776999768609 20.314590690047183 36.94956689705128 18.398072415215445 14 20.36615056489502 27.45978329761869 29.310908560448297 22.863157577038 15 16.594985865048944 22.724071670741157 39.42896809827061 21.251974365939294 16 18.672220042455155 23.284690992867134 30.52747009527259 27.515618869405124 17 18.86261431201521 25.173542993390274 32.75561122345295 23.20823147114156 18 18.161148502500023 23.909194257487503 32.55767160635419 25.371985633658284 19 19.464984557188707 25.18083682934436 29.591092465718972 25.763086147747966 20 22.33598929566696 24.619714484049133 34.75261320536424 18.29168301491967 21 21.639553717844244 29.386362035835372 30.0893369148583 18.884747331462087 22 18.83218141027576 22.184327810138935 32.935442006458814 26.048048773126492 23 20.67400074447429 26.696194126701478 31.26993229308142 21.359872835742813 24 22.333725691405345 22.513053451241966 29.422076680851923 25.73114417650077 25 18.681274459501605 30.352669543959195 27.29705530236723 23.669000694171974 26 18.03237457117275 22.83473676797553 33.385899254519664 25.746989406332055 27 22.763307477942433 25.60211873358887 28.207778750289236 23.42679503817946 28 17.052233925894626 25.67430255837584 33.69928268896065 23.57418082676888 29 20.752723870461473 20.51479391140756 34.04259600197185 24.689886216159117 30 20.20166198855119 25.928077747261042 30.13133934949044 23.73892091469733 31 21.04749544764032 25.39864586162839 26.59533798126742 26.95852070946388 32 22.677290516001168 27.362196802784737 29.276451473354864 20.684061207859234 33 23.119699393354058 22.522107868288412 25.150152416020283 29.208040322337247 34 21.44085956599161 22.86340908862262 29.8760550910975 25.81967625428827 35 20.364389983802653 24.159196772603348 27.160987535085866 28.315425708508137 36 19.60633406774716 26.712793891286633 27.6539502409481 26.02692180001811 37 18.19862372860894 24.220817110836126 31.560428173321665 26.02013098723327 38 21.504491996901375 27.529452006559424 24.995724303061397 25.9703316934778 39 22.332971156651478 21.668477550075956 30.3783237255908 25.62022756768177 40 23.327447962253142 23.086499864183743 29.63284338876649 23.95320878479663 41 18.247919999195165 25.07721405647944 25.24924798036198 31.425617963963422 42 18.62845702673065 25.58375838791135 30.793820863388966 24.993963721969035 43 22.09051398907434 22.147355607199266 27.443435044618152 28.318695359108244 44 21.029889636716668 21.39936015452872 30.208804917554506 27.36194529120011 45 20.05075503777704 20.929536514451854 28.358182677894145 30.661525769876963 46 25.223845310314992 23.85864042897816 27.438907836094927 23.478606424611918 47 17.838710651012583 22.507017173210997 36.44201651928088 23.21225565649554 48 20.347035684463627 23.277648668497672 28.16074608396463 28.214569563074075 49 19.54748035694524 20.395325908711357 35.35649252004547 24.70070121429793 50 21.270083200032193 19.373434340385717 31.68291431503335 27.67356814454874 51 19.12619845270073 19.706435678427347 28.521916719484096 32.64544914938782 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 102.0 1 280.5 2 459.0 3 3659.5 4 6860.0 5 4525.0 6 2190.0 7 2137.0 8 2084.0 9 2018.5 10 1953.0 11 1897.0 12 1841.0 13 1753.5 14 1666.0 15 1551.5 16 1437.0 17 1379.0 18 1321.0 19 1294.0 20 1267.0 21 1283.0 22 1299.0 23 1398.0 24 1497.0 25 1560.0 26 1948.0 27 2273.0 28 2708.0 29 3143.0 30 3573.0 31 4003.0 32 4717.5 33 5432.0 34 6128.0 35 6824.0 36 7620.0 37 8416.0 38 8983.5 39 9551.0 40 10714.0 41 11877.0 42 13662.0 43 15447.0 44 17860.5 45 20274.0 46 42737.5 47 65201.0 48 53309.0 49 41417.0 50 41252.0 51 41087.0 52 34954.0 53 28821.0 54 25452.5 55 22084.0 56 19957.0 57 17830.0 58 16665.5 59 15501.0 60 14695.0 61 13889.0 62 12452.0 63 11015.0 64 9997.0 65 8979.0 66 7430.5 67 5882.0 68 5129.0 69 4376.0 70 3770.0 71 3164.0 72 2640.0 73 2116.0 74 1814.5 75 1194.5 76 876.0 77 662.5 78 449.0 79 371.0 80 293.0 81 217.5 82 142.0 83 108.5 84 75.0 85 51.5 86 28.0 87 19.5 88 11.0 89 8.5 90 6.0 91 3.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 397596.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.47114799719034 #Duplication Level Percentage of deduplicated Percentage of total 1 72.90387811850928 25.85984250310769 2 10.358216254276122 7.348356434846619 3 3.803776427136806 4.047729497855808 4 2.1062477381674407 2.9884410095713876 5 1.3814803030735305 2.4501346142762284 6 1.1598985144961724 2.4685759121648974 7 0.9572340439958988 2.376793330976928 8 0.8350056122151774 2.369488611949527 9 0.7651228250191657 2.442580646605488 >10 5.638134608613673 31.72408164524945 >50 0.05332356708793698 1.3406584415712703 >100 0.028439235780233052 2.171634657706962 >500 7.109808945058263E-4 0.1525768166197552 >1k 0.006398828050552438 4.965177463817752 >5k 0.0014219617890116527 4.597227752333087 >10k+ 7.109808945058263E-4 2.6967006613471773 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGC 10693 2.689413374380024 No Hit GAATCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 9747 2.4514834153261096 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCG 8482 2.1333212607772714 No Hit GCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 4013 1.0093159890944579 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3869 0.9730983209086611 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCATGCACT 2411 0.6063944305274701 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCT 1959 0.49271119427760846 No Hit GAACTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCT 1791 0.4504572480608457 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCATGCACTCGTA 1654 0.4160001609674142 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTC 1558 0.39185504884354977 No Hit CCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 1404 0.3531222648115172 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGCT 1029 0.2588054205776718 TruSeq Adapter, Index 16 (95% over 22bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATG 605 0.1521645086972706 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTT 481 0.12097707220394571 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCC 429 0.10789846980351915 No Hit TCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 425 0.1068924234650248 TruSeq Adapter, Index 13 (95% over 21bp) TGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGCTT 408 0.1026167265264238 TruSeq Adapter, Index 13 (95% over 23bp) GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTCATGCAC 407 0.10236521494180022 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCATGCACTCGT 403 0.10135916860330586 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.26383565227014355 0.0 2 0.0 0.0 0.0 1.8561554945220777 0.0 3 0.0 0.0 0.0 2.2668739122123966 0.0 4 0.0 0.0 0.0 3.2012394490890252 0.0 5 0.0 0.0 0.0 6.993279610458858 0.0 6 0.0 0.0 0.0 8.049628265877926 0.0 7 0.0 0.0 0.0 9.443505467861849 0.0 8 0.0 0.0 0.0 11.12033320254731 0.0 9 0.0 0.0 0.0 11.631656254087064 0.0 10 0.0 0.0 0.0 14.820068612360286 0.0 11 0.0 0.0 0.0 16.42446101067415 0.0 12 2.5151158462358777E-4 0.0 0.0 20.53164518757734 0.0 13 2.5151158462358777E-4 0.0 0.0 21.252728900693167 0.0 14 2.5151158462358777E-4 0.0 0.0 21.56208814978018 0.0 15 2.5151158462358777E-4 0.0 0.0 22.421754746023602 0.0 16 2.5151158462358777E-4 0.0 0.0 23.317890522037445 0.0 17 2.5151158462358777E-4 0.0 0.0 24.234147224821175 0.0 18 2.5151158462358777E-4 0.0 0.0 25.121480095373194 0.0 19 2.5151158462358777E-4 0.0 0.0 26.391110574553064 0.0 20 2.5151158462358777E-4 0.0 0.0 27.110433706576526 0.0 21 2.5151158462358777E-4 0.0 0.0 27.855411020231593 0.0 22 2.5151158462358777E-4 0.0 0.0 28.680620529381585 0.0 23 2.5151158462358777E-4 0.0 0.0 29.43943098019095 0.0 24 2.5151158462358777E-4 0.0 0.0 30.01237436996348 0.0 25 2.5151158462358777E-4 0.0 0.0 30.554633346411936 0.0 26 2.5151158462358777E-4 0.0 0.0 31.088089417398564 0.0 27 2.5151158462358777E-4 0.0 0.0 31.63588164870874 0.0 28 2.5151158462358777E-4 0.0 0.0 32.13613819052505 0.0 29 2.5151158462358777E-4 0.0 0.0 32.642431010372334 0.0 30 2.5151158462358777E-4 0.0 0.0 33.19072626485176 0.0 31 2.5151158462358777E-4 0.0 0.0 33.710600710268714 0.0 32 2.5151158462358777E-4 0.0 0.0 34.239781084316746 0.0 33 2.5151158462358777E-4 0.0 0.0 34.73601344077908 0.0 34 2.5151158462358777E-4 0.0 0.0 35.221179287517984 0.0 35 2.5151158462358777E-4 0.0 0.0 35.74331733719655 0.0 36 2.5151158462358777E-4 0.0 0.0 36.22848318393545 0.0 37 2.5151158462358777E-4 0.0 0.0 36.74986669886015 0.0 38 2.5151158462358777E-4 0.0 0.0 37.21616917675228 0.0 39 2.5151158462358777E-4 0.0 0.0 37.716425718568594 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGCGG 45 3.8380676E-10 45.000004 2 CTATGCG 25 3.8861865E-5 45.0 1 TTTACGG 40 6.7957444E-9 45.0 2 CACGAAT 20 7.0277136E-4 45.0 44 CTACGCG 20 7.0277136E-4 45.0 1 TGTTAAC 20 7.0277136E-4 45.0 44 TTACGAG 25 3.8861865E-5 45.0 1 AATAGCG 20 7.0277136E-4 45.0 1 CAATCAC 40 6.7957444E-9 45.0 42 CGTTTTT 2025 0.0 43.11111 1 TACGGCT 1100 0.0 42.954544 7 CTCGAAT 70 0.0 41.785717 43 AACGGGC 65 0.0 41.53846 4 CCGATGA 490 0.0 41.32653 18 CGATGAA 490 0.0 41.32653 19 CGAATAT 60 3.6379788E-12 41.249996 14 ACGGCTG 1160 0.0 40.926723 8 TACGAAT 55 6.002665E-11 40.909092 12 TGATACC 1010 0.0 40.767326 4 TATGCGG 50 1.0786607E-9 40.5 2 >>END_MODULE