##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551903_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 458888 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.04114293683862 33.0 31.0 34.0 30.0 34.0 2 32.16283711929708 33.0 31.0 34.0 30.0 34.0 3 32.16220515681386 33.0 31.0 34.0 30.0 34.0 4 35.761425445860425 37.0 35.0 37.0 35.0 37.0 5 35.797588954167466 37.0 35.0 37.0 35.0 37.0 6 35.69599989539931 37.0 35.0 37.0 35.0 37.0 7 35.840377172643436 37.0 35.0 37.0 35.0 37.0 8 35.28462718571852 37.0 35.0 37.0 32.0 37.0 9 36.99218545701783 39.0 37.0 39.0 32.0 39.0 10 36.82358440403759 39.0 35.0 39.0 33.0 39.0 11 37.125176513659106 39.0 37.0 39.0 34.0 39.0 12 37.10317768170011 39.0 37.0 39.0 34.0 39.0 13 37.21573891668555 39.0 37.0 39.0 34.0 39.0 14 38.29912527675599 40.0 38.0 41.0 34.0 41.0 15 38.254545771517236 40.0 38.0 41.0 33.0 41.0 16 38.41477005282335 40.0 38.0 41.0 34.0 41.0 17 38.32047035442199 40.0 38.0 41.0 34.0 41.0 18 38.20898127647705 40.0 37.0 41.0 34.0 41.0 19 38.105943062359444 40.0 37.0 41.0 34.0 41.0 20 38.06225484214013 40.0 36.0 41.0 34.0 41.0 21 38.05889454507418 40.0 36.0 41.0 34.0 41.0 22 38.169102264604874 40.0 37.0 41.0 34.0 41.0 23 38.17786693049285 40.0 36.0 41.0 34.0 41.0 24 38.04407393525217 40.0 36.0 41.0 34.0 41.0 25 37.80199307892122 40.0 36.0 41.0 33.0 41.0 26 37.89966179111243 40.0 36.0 41.0 34.0 41.0 27 37.91091290249473 40.0 36.0 41.0 34.0 41.0 28 37.750150363487386 40.0 36.0 41.0 33.0 41.0 29 37.851573804501314 40.0 36.0 41.0 34.0 41.0 30 37.51327992887153 40.0 36.0 41.0 33.0 41.0 31 37.348472829971584 39.0 35.0 41.0 33.0 41.0 32 37.35060188978574 40.0 35.0 41.0 33.0 41.0 33 37.17857298512927 40.0 35.0 41.0 33.0 41.0 34 37.001475305521176 40.0 35.0 41.0 32.0 41.0 35 36.94809190913687 40.0 35.0 41.0 32.0 41.0 36 36.76369179407612 40.0 35.0 41.0 31.0 41.0 37 36.72261205348582 40.0 35.0 41.0 31.0 41.0 38 36.51701286588449 39.0 35.0 41.0 31.0 41.0 39 36.44687592615192 39.0 35.0 41.0 31.0 41.0 40 36.325327748818886 39.0 35.0 41.0 30.0 41.0 41 36.12366416206133 39.0 35.0 41.0 29.0 41.0 42 36.35476848381305 39.0 35.0 41.0 31.0 41.0 43 36.22437936925786 39.0 35.0 41.0 30.0 41.0 44 36.304154826450024 39.0 35.0 41.0 31.0 41.0 45 36.33131613814264 39.0 35.0 41.0 31.0 41.0 46 36.20388635135371 39.0 35.0 41.0 30.0 41.0 47 36.037521138055475 39.0 35.0 41.0 30.0 41.0 48 36.05779841704294 39.0 35.0 41.0 30.0 41.0 49 36.02144749917191 39.0 35.0 41.0 30.0 41.0 50 35.85973919562072 38.0 35.0 41.0 30.0 41.0 51 34.95603720297763 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 4.0 9 4.0 10 6.0 11 10.0 12 11.0 13 6.0 14 11.0 15 26.0 16 31.0 17 77.0 18 107.0 19 227.0 20 606.0 21 1094.0 22 1405.0 23 1827.0 24 2512.0 25 3378.0 26 4826.0 27 5805.0 28 5771.0 29 5783.0 30 6300.0 31 7782.0 32 10074.0 33 13865.0 34 25765.0 35 34685.0 36 33917.0 37 52517.0 38 97507.0 39 142897.0 40 50.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.38059831592894 16.163639057896482 17.82635414305887 19.629408483115707 2 30.242891511654257 30.785071738637747 20.934955806209793 18.037080943498196 3 28.224752009204863 30.033908055996232 26.09547427694775 15.645865657851154 4 26.670124300482907 20.689580028242187 34.50384407524276 18.136451596032146 5 29.88005787904674 24.561766705601368 25.341913495231953 20.216261920119944 6 23.57023936123847 35.68801101793902 25.873415735429994 14.868333885392515 7 67.4816077125573 5.846524642178483 20.39735185927721 6.274515785986995 8 65.8132267568557 12.087481041125503 14.351432157737836 7.747860044280958 9 60.764500270218434 6.871175537386029 15.992791269329334 16.371532923066194 10 40.30024755495894 20.277932741758338 22.931085580795312 16.490734122487403 11 30.566717804780254 21.92866233154931 27.335428252645528 20.16919161102491 12 26.10876728090514 18.331488293439794 31.01759034884329 24.54215407681177 13 24.748086679102528 21.196457523404405 34.91570927982427 19.139746517668797 14 20.8070378828821 26.455474974285664 28.884608008925927 23.852879133906313 15 17.68492529767612 22.647574135736825 37.635545056745876 22.03195550984118 16 20.02645525705619 23.12111016195673 30.30478025139032 26.547654329596764 17 19.96739945258974 24.929612454455118 31.367784731786408 23.73520336116874 18 19.538318718292917 23.45997280382141 31.758511880894684 25.243196596990984 19 20.81640836108157 25.29048482418368 28.669304928435697 25.223801886299054 20 23.08406408535416 24.176705427032307 33.80715991701679 18.932070570596746 21 22.96682414881191 28.52308188490438 29.321533794738585 19.188560171545127 22 19.515219399940726 22.428348529488677 31.515751120099022 26.540680950471575 23 21.265537560363313 26.4811893098098 30.386717456111295 21.86655567371559 24 22.97074667456983 22.45079409354788 29.102961942783423 25.475497289098865 25 19.428923833266502 29.55339865065114 27.037970049336657 23.979707466745698 26 20.235656630811878 23.914549955544707 31.04679137393002 24.803002039713395 27 23.396558637401718 26.79368386185736 27.049301790415093 22.76045571032583 28 18.611295130838027 26.29486933630864 31.822579801607365 23.27125573124597 29 24.331427276372448 22.126314046128904 29.421776119663186 24.120482557835462 30 20.440281724516655 29.48758738515716 27.904412405641466 22.167718484684716 31 22.536217987831453 27.66927877826398 24.909128153274875 24.885375080629696 32 23.723871620090307 27.07588779832988 26.797388469517617 22.402852112062202 33 21.751930754345285 24.95576262617458 24.48985373337285 28.80245288610729 34 23.910191593591463 26.43629818169139 25.911333484423217 23.742176740293928 35 21.56452119035582 24.59706943742264 25.608209410575128 28.230199961646413 36 25.858597304788965 28.204485626122278 22.970092920276844 22.96682414881191 37 20.263550147312635 28.9521626192012 29.892043374418158 20.892243859068007 38 20.40127438503513 27.42521050888234 24.673994525897385 27.499520580185145 39 23.355154198845906 25.361308205923887 28.863469953452693 22.420067641777514 40 21.072897962029952 22.587646658879727 28.117972141350396 28.221483237739932 41 21.608976482278898 27.825743972385418 24.60491448893848 25.960365056397205 42 21.318709576192884 22.97880964418333 29.216715189763082 26.485765589860705 43 26.667073447115637 22.086217116159062 26.35283555028678 24.893873886438524 44 21.93890448213943 23.415299593800665 29.057417060372032 25.588378863687872 45 21.309774934188734 22.288445110789564 27.04799428182912 29.35378567319259 46 25.55416572235491 24.705156813863077 26.495136068060184 23.245541395721833 47 18.68822021931277 23.332926552884363 33.868176984362194 24.110676243440665 48 21.215634315998674 24.111547915831313 27.867584247136556 26.805233521033458 49 20.765633444326284 20.814882934397936 33.70212339394362 24.71736022733216 50 22.493288122592006 20.491274559369607 30.443376161503462 26.572061156534925 51 20.700258015027632 21.22783772946776 27.256106065096493 30.815798190408117 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 128.0 1 340.0 2 552.0 3 4457.0 4 8362.0 5 5446.0 6 2530.0 7 2447.5 8 2365.0 9 2293.5 10 2222.0 11 2136.0 12 2050.0 13 1940.5 14 1831.0 15 1635.0 16 1439.0 17 1322.5 18 1206.0 19 1202.0 20 1198.0 21 1175.5 22 1153.0 23 1343.0 24 1533.0 25 1783.0 26 2394.0 27 2755.0 28 3274.0 29 3793.0 30 4357.5 31 4922.0 32 5253.0 33 5584.0 34 6796.5 35 8009.0 36 8755.0 37 9501.0 38 9942.5 39 10384.0 40 12126.0 41 13868.0 42 15971.5 43 18075.0 44 21048.5 45 24022.0 46 46116.5 47 68211.0 48 56675.0 49 45139.0 50 45654.0 51 46169.0 52 38871.5 53 31574.0 54 28679.5 55 25785.0 56 23094.0 57 20403.0 58 19472.0 59 18541.0 60 17557.0 61 16573.0 62 15585.5 63 14598.0 64 13081.0 65 11564.0 66 9608.0 67 7652.0 68 7092.5 69 6533.0 70 5919.0 71 5305.0 72 4688.0 73 4071.0 74 3344.0 75 2251.0 76 1885.0 77 1651.0 78 1417.0 79 1090.5 80 764.0 81 536.0 82 308.0 83 223.5 84 139.0 85 121.0 86 103.0 87 58.5 88 14.0 89 9.5 90 5.0 91 4.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 458888.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.12330905094426 #Duplication Level Percentage of deduplicated Percentage of total 1 72.77899123867219 24.106810192145037 2 10.419526778645174 6.902584113073076 3 3.842057029731464 3.817849271614446 4 1.9588704841115117 2.595370897439936 5 1.2455433533287106 2.0628258714328176 6 1.0016729988046922 1.9907234584436364 7 0.8121545176716433 1.8830871560170888 8 0.6988927520842512 1.8519712496601295 9 0.6454470913153255 1.9241409133503515 >10 6.477747396512154 37.69465655785544 >50 0.07079616903413855 1.6320785251932992 >100 0.03969878637428329 2.7642549265829306 >500 6.616464395713883E-4 0.12316746759213565 >1k 0.005954817956142494 4.694609116176402 >5k 0.0019849393187141647 5.955870283423271 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGC 9582 2.0880912117989574 No Hit GAATCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTC 8995 1.9601732884712608 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCG 8599 1.8738777217970397 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4953 1.079348337720751 No Hit GCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 4006 0.8729798992346716 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAATCACGT 2364 0.5151583828733809 No Hit GAATGACTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCT 2041 0.4447708373284984 No Hit GAACTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCT 1949 0.4247223723435784 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTC 1633 0.3558602534823312 No Hit CCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGC 1604 0.34954062865012814 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAATCACGTCGTA 1603 0.34932271055246594 No Hit CTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTTCTGCT 1268 0.2763201478356374 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATG 562 0.12246997088614214 No Hit GAATGCTGTCTCTTATACACATCTGACGCGAATCACGTCGTATGCCGTCTT 466 0.10154983351057338 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1791809766217465E-4 0.0 0.0 0.2843831174491379 0.0 2 2.1791809766217465E-4 0.0 0.0 1.7322309583166262 0.0 3 2.1791809766217465E-4 0.0 0.0 2.1377765380659333 0.0 4 2.1791809766217465E-4 0.0 0.0 3.0467129234148635 0.0 5 2.1791809766217465E-4 0.0 0.0 6.294564250971915 0.0 6 2.1791809766217465E-4 0.0 0.0 7.271055246596119 0.0 7 2.1791809766217465E-4 0.0 0.0 8.572026289639302 0.0 8 2.1791809766217465E-4 0.0 0.0 10.24541936158714 0.0 9 2.1791809766217465E-4 0.0 0.0 10.763628597827793 0.0 10 4.358361953243493E-4 0.0 0.0 13.688743222747163 0.0 11 4.358361953243493E-4 0.0 0.0 15.252741409668591 0.0 12 4.358361953243493E-4 0.0 0.0 18.69388608985199 0.0 13 4.358361953243493E-4 0.0 0.0 19.392967347152247 0.0 14 4.358361953243493E-4 0.0 0.0 19.70110353724656 0.0 15 4.358361953243493E-4 0.0 0.0 20.468828995310403 0.0 16 4.358361953243493E-4 0.0 0.0 21.340937222154427 0.0 17 4.358361953243493E-4 0.0 0.0 22.260115758093477 0.0 18 4.358361953243493E-4 0.0 0.0 23.140504872648663 0.0 19 4.358361953243493E-4 0.0 0.0 24.29743205313715 0.0 20 4.358361953243493E-4 0.0 0.0 24.967748121546 0.0 21 4.358361953243493E-4 0.0 0.0 25.717822213699204 0.0 22 4.358361953243493E-4 0.0 0.0 26.449809103746446 0.0 23 4.358361953243493E-4 0.0 0.0 27.15150537821865 0.0 24 4.358361953243493E-4 0.0 0.0 27.756446017328848 0.0 25 4.358361953243493E-4 0.0 0.0 28.355720785899827 0.0 26 4.358361953243493E-4 0.0 0.0 28.834486846463626 0.0 27 4.358361953243493E-4 0.0 0.0 29.327199665277803 0.0 28 4.358361953243493E-4 0.0 0.0 29.833205488049373 0.0 29 4.358361953243493E-4 0.0 0.0 30.34095465560224 0.0 30 4.358361953243493E-4 0.0 0.0 30.87420024058158 0.0 31 4.358361953243493E-4 0.0 0.0 31.398729101654435 0.0 32 4.358361953243493E-4 0.0 0.0 31.934807621903385 0.0 33 4.358361953243493E-4 0.0 0.0 32.435801328428724 0.0 34 4.358361953243493E-4 0.0 0.0 32.905196910793045 0.0 35 4.358361953243493E-4 0.0 0.0 33.414035668834224 0.0 36 4.358361953243493E-4 0.0 0.0 33.90631265145308 0.0 37 4.358361953243493E-4 0.0 0.0 34.42168895242412 0.0 38 4.358361953243493E-4 0.0 0.0 34.89413538815572 0.0 39 4.358361953243493E-4 0.0 0.0 35.38597653457924 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATGCG 30 2.1626402E-6 45.000004 1 ACGCAAA 20 7.0288527E-4 45.0 28 GCGAAAA 25 3.88713E-5 45.0 33 CGATTAC 25 3.88713E-5 45.0 10 AGACCTT 20 7.0288527E-4 45.0 18 CATACGG 25 3.88713E-5 45.0 2 TCACTAG 20 7.0288527E-4 45.0 38 CAGTAAT 20 7.0288527E-4 45.0 36 CGATAGT 20 7.0288527E-4 45.0 10 AATACGG 35 1.2097917E-7 45.0 2 CGTTTTT 2365 0.0 43.85835 1 TACGGCT 1130 0.0 42.809734 7 CTACGAA 80 0.0 42.1875 11 TACGAAT 80 0.0 42.1875 12 CGAATAT 75 0.0 42.000004 14 AGGGATA 145 0.0 41.89655 6 CGAACAC 70 0.0 41.785713 34 ACGGCTG 1160 0.0 41.702583 8 GCGAACA 65 0.0 41.53846 33 TAAGGGT 60 3.6379788E-12 41.250004 4 >>END_MODULE