##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551884_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 626339 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.52661577835645 30.0 25.0 31.0 16.0 33.0 2 27.649858942202226 30.0 25.0 33.0 16.0 33.0 3 27.576108145908208 30.0 25.0 33.0 16.0 34.0 4 31.891285709495975 35.0 30.0 35.0 19.0 37.0 5 33.29649279383848 35.0 32.0 35.0 28.0 37.0 6 33.07095518561035 35.0 32.0 35.0 28.0 37.0 7 33.942732290341176 35.0 33.0 36.0 31.0 37.0 8 33.63116299639652 35.0 33.0 37.0 28.0 37.0 9 35.81905326029514 39.0 35.0 39.0 30.0 39.0 10 35.159027299912665 37.0 34.0 39.0 30.0 39.0 11 35.831969588353914 37.0 35.0 39.0 31.0 39.0 12 35.83796155117277 37.0 35.0 39.0 31.0 39.0 13 35.816026145585695 37.0 35.0 39.0 31.0 39.0 14 36.79060860013507 38.0 36.0 40.0 31.0 41.0 15 36.863125240484784 39.0 35.0 40.0 31.0 41.0 16 36.56007529468866 38.0 34.0 40.0 31.0 41.0 17 36.38625728239819 38.0 35.0 40.0 30.0 41.0 18 36.37437234468874 38.0 35.0 40.0 30.0 41.0 19 35.97438767185182 37.0 34.0 40.0 30.0 41.0 20 35.844924234320395 38.0 34.0 40.0 30.0 41.0 21 36.41853692648869 38.0 35.0 40.0 31.0 41.0 22 36.669284524834 39.0 35.0 40.0 31.0 41.0 23 36.89641711597074 39.0 35.0 40.0 31.0 41.0 24 36.97480597567771 39.0 35.0 40.0 31.0 41.0 25 36.26117964872058 38.0 35.0 40.0 30.0 41.0 26 36.346992603047234 38.0 35.0 40.0 30.0 41.0 27 36.4185496991246 38.0 35.0 40.0 30.0 41.0 28 36.37050862232753 39.0 35.0 40.0 30.0 41.0 29 36.59286903737433 39.0 35.0 40.0 30.0 41.0 30 36.10141472908441 38.0 35.0 40.0 29.0 41.0 31 36.28627468511461 39.0 35.0 40.0 30.0 41.0 32 35.85681396176831 39.0 35.0 40.0 28.0 41.0 33 35.87240456046965 39.0 35.0 40.0 27.0 41.0 34 35.757465206541504 39.0 35.0 40.0 27.0 41.0 35 35.54844101995884 39.0 35.0 41.0 25.0 41.0 36 35.45661854043897 39.0 35.0 41.0 25.0 41.0 37 35.62443022069518 39.0 35.0 41.0 26.0 41.0 38 35.460525370446355 39.0 35.0 40.0 25.0 41.0 39 35.22692822896227 39.0 35.0 40.0 24.0 41.0 40 35.25859638310883 38.0 35.0 40.0 24.0 41.0 41 35.002865860181146 38.0 34.0 40.0 23.0 41.0 42 34.95400733468617 38.0 35.0 40.0 23.0 41.0 43 34.99591435308994 38.0 35.0 40.0 23.0 41.0 44 35.34296922273721 38.0 35.0 40.0 25.0 41.0 45 35.35779984960221 38.0 35.0 40.0 26.0 41.0 46 35.15032434512301 38.0 35.0 40.0 25.0 41.0 47 34.95657623108253 38.0 34.0 40.0 24.0 41.0 48 35.02759687645189 38.0 34.0 40.0 25.0 41.0 49 35.00326979479164 38.0 34.0 40.0 24.0 41.0 50 34.80390012437354 38.0 34.0 40.0 24.0 41.0 51 33.946193674671385 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 12.0 9 26.0 10 25.0 11 37.0 12 42.0 13 34.0 14 53.0 15 88.0 16 110.0 17 209.0 18 444.0 19 1263.0 20 2848.0 21 4644.0 22 5897.0 23 6740.0 24 7546.0 25 8560.0 26 9228.0 27 9288.0 28 9752.0 29 11494.0 30 14045.0 31 18275.0 32 24893.0 33 37249.0 34 49768.0 35 52473.0 36 72429.0 37 109224.0 38 130024.0 39 39617.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 50.09028657005232 15.736845382452632 17.859338153939 16.313529893556044 2 29.492974251962593 33.88835758271479 20.31040698407731 16.3082611812453 3 27.856001302808863 32.222646202775174 24.514360434205756 15.406992060210206 4 26.042287004321942 20.166714830147892 36.48407651447539 17.30692165105478 5 32.53988654706158 24.176524214522807 23.211232256014714 20.072356982400905 6 22.103206091270064 40.017945553446296 24.700202286621142 13.178646068662497 7 66.57752431191416 5.9930804244985545 22.448067260700675 4.981328002886616 8 64.79669955088218 16.712036133786974 12.39249032871975 6.098773986611084 9 60.40450937910621 7.455068261756013 12.914731479278792 19.225690879858988 10 42.74410502938505 21.983462629662213 20.563145517044283 14.709286823908457 11 35.04970950236214 22.57595327769786 24.52457854292963 17.84975867701037 12 26.876978760703068 19.495672471297492 29.115383203025836 24.5119655649736 13 27.691713273482893 21.872660013187748 32.53477749269964 17.900849220629723 14 19.35517347634428 31.915783625161453 26.190609238766864 22.5384336597274 15 17.96471240015391 22.564457905383506 36.31579703642915 23.155032658033427 16 19.454640378453202 23.916601073859365 28.75870734538325 27.870051202304186 17 19.44059047895788 27.666806633468454 31.037505248755064 21.855097638818595 18 19.540376696964422 24.90600138263784 29.511813889922227 26.04180803047551 19 21.59820799918255 26.10152010333062 26.273950688045932 26.026321209440894 20 26.768730671409575 24.683917175842478 31.68491823118152 16.862433921566435 21 23.689248154753255 30.97635625436066 27.82486800279082 17.509527588095263 22 20.341380626146545 22.897983360448578 32.41758855827276 24.343047455132126 23 24.751612146138115 26.88081055147452 28.76158118846184 19.605996113925524 24 22.64109372081253 27.152548380349938 26.804334393994306 23.402023504843225 25 19.654851446261528 33.83598977550496 25.89508237551869 20.614076402714822 26 19.383432933283736 24.79791295129315 32.92402357189956 22.894630543523554 27 25.173428446895375 26.0325478694445 26.626635096968254 22.16738858669187 28 18.599991378470765 28.99244658244178 31.71285837222335 20.69470366686411 29 22.33997882935599 22.573718066414514 33.51986703686023 21.566436067369267 30 19.99220869209805 29.769661477251137 27.373993955350056 22.864135875300757 31 26.42530642351825 22.832842917333902 24.399726026959843 26.342124632188003 32 26.99975572333832 27.141053008035588 26.840576748374286 19.018614520251813 33 24.87327150313169 23.027625614882673 24.509730353690255 27.58937252829538 34 24.5287296495987 23.926659524634424 28.155200298879677 23.389410526887197 35 23.697550368091402 25.1173885068629 25.71482855131167 25.47023257373403 36 23.80931093225873 27.88665562898047 27.969358446464295 20.334674992296502 37 20.85484058952101 25.416268187036096 30.77390997526898 22.95498124817391 38 23.188081853437197 24.94176476317138 24.58429061578474 27.285862767606677 39 24.844373414396994 24.605365465027727 29.085686824547093 21.46457429602819 40 20.291088372271247 25.73143297798796 27.873723335126826 26.10375531461397 41 22.375263236043104 24.843734782601754 27.966484603385705 24.814517377969437 42 20.757768556644248 26.76489888063812 29.79057666854531 22.686755894172325 43 22.090433455365226 24.215959727878992 28.74513641973436 24.94847039702142 44 22.178085669262174 22.88712661992946 29.786425561876236 25.14836214893213 45 21.953446935285843 22.631035270037472 27.902142450015088 27.513375344661593 46 25.89859485039252 26.32743610089744 26.588476847202553 21.18549220150749 47 18.903980113005897 26.064479459206595 33.3562176393295 21.675322788458008 48 23.7860008717324 24.769334178456077 26.981075743327494 24.46358920648403 49 20.926846324434532 23.105219378004563 33.441315326045476 22.526618971515425 50 21.81310759828144 23.385419078166937 30.212392969302567 24.589080354249056 51 21.260052463601976 22.410547642730215 28.74082565511648 27.588574238551328 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 308.0 1 863.5 2 1419.0 3 5034.0 4 8649.0 5 5876.5 6 3104.0 7 3019.5 8 2935.0 9 2826.0 10 2717.0 11 2650.5 12 2584.0 13 2449.5 14 2315.0 15 2099.0 16 1883.0 17 1868.5 18 1854.0 19 1808.5 20 1763.0 21 1726.5 22 1690.0 23 1969.0 24 2248.0 25 2785.0 26 4022.5 27 4723.0 28 5852.0 29 6981.0 30 7725.5 31 8470.0 32 9642.0 33 10814.0 34 12670.0 35 14526.0 36 14729.5 37 14933.0 38 16267.5 39 17602.0 40 19912.0 41 22222.0 42 24915.0 43 27608.0 44 31217.5 45 34827.0 46 65659.5 47 96492.0 48 74042.5 49 51593.0 50 50203.5 51 48814.0 52 44057.5 53 39301.0 54 37905.0 55 36509.0 56 34711.5 57 32914.0 58 31001.5 59 29089.0 60 27802.5 61 26516.0 62 23795.5 63 21075.0 64 18210.0 65 15345.0 66 12644.5 67 9944.0 68 8383.0 69 6822.0 70 5625.5 71 4429.0 72 3722.0 73 3015.0 74 2650.5 75 1799.5 76 1313.0 77 994.0 78 675.0 79 523.5 80 372.0 81 301.5 82 231.0 83 150.5 84 70.0 85 48.0 86 26.0 87 15.0 88 4.0 89 4.5 90 5.0 91 2.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 626339.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.77996632711752 #Duplication Level Percentage of deduplicated Percentage of total 1 75.42910144743212 19.445596953995313 2 8.807022047145052 4.540894636351622 3 3.1933460117310783 2.469730579597867 4 1.6821824385376156 1.7346642648627273 5 1.0192577588900602 1.3138215351419513 6 0.7443372282088423 1.1513393207546367 7 0.6261820089258774 1.1300065773329147 8 0.5040005448795525 1.0394493660674995 9 0.4796778322786689 1.1129470527607928 >10 6.766556746090176 40.54364391271417 >50 0.6760570278358413 10.903958023129734 >100 0.059193933312815604 2.7530963974959195 >500 0.0068540343835891745 1.145477006274777 >1k 0.0037385642092304587 2.947462850671138 >5k 6.230940348717431E-4 0.8356151152210615 >10k+ 0.0018692821046152293 6.932296407627861 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCG 15713 2.5087053496588907 No Hit GAATCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTC 14252 2.2754450864467963 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGC 13191 2.106048002758889 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5202 0.8305406497120569 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCGTCGATT 3978 0.6351193203680435 No Hit GCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCTGC 3750 0.5987173080392567 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCT 3134 0.500368011572008 No Hit GAACTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCT 2811 0.44879849410622685 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCGTCGATTCGTA 2526 0.4032959786952433 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTC 2150 0.34326458994250714 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTCGTCGAT 812 0.12964225443410038 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATG 781 0.12469285802097585 No Hit CCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTTCTGC 771 0.12309627853287117 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCGTCGATTCGTATGCCGTCTT 735 0.11734859237569431 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 651 0.10393732467561496 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.193158976209369E-4 0.0 0.0 0.08190452773977032 0.0 2 3.193158976209369E-4 0.0 0.0 0.8886561430790674 0.0 3 3.193158976209369E-4 0.0 0.0 1.042566405732359 0.0 4 3.193158976209369E-4 0.0 0.0 1.6668289855812906 0.0 5 3.193158976209369E-4 0.0 0.0 4.516244398001721 0.0 6 3.193158976209369E-4 0.0 0.0 4.941253857735188 0.0 7 3.193158976209369E-4 0.0 0.0 5.728367545370798 0.0 8 3.193158976209369E-4 0.0 0.0 6.4455510514274215 0.0 9 3.193158976209369E-4 0.0 0.0 6.6187799258867805 0.0 10 3.193158976209369E-4 0.0 0.0 9.624181154295039 0.0 11 3.193158976209369E-4 0.0 0.0 10.23790630952248 0.0 12 3.193158976209369E-4 0.0 0.0 13.003820614715034 0.0 13 3.193158976209369E-4 0.0 0.0 13.385243454423243 0.0 14 3.193158976209369E-4 0.0 0.0 13.573959149917217 0.0 15 3.193158976209369E-4 0.0 0.0 14.175230985137441 0.0 16 3.193158976209369E-4 0.0 0.0 14.601517708461392 0.0 17 3.193158976209369E-4 0.0 0.0 15.022216403576977 0.0 18 3.193158976209369E-4 0.0 0.0 15.467342764860563 0.0 19 3.193158976209369E-4 0.0 0.0 16.416349612589986 0.0 20 3.193158976209369E-4 0.0 0.0 16.799209373837492 0.0 21 3.193158976209369E-4 0.0 0.0 17.08882889297968 0.0 22 3.193158976209369E-4 0.0 0.0 17.470730706534322 0.0 23 3.193158976209369E-4 0.0 0.0 17.774559783120644 0.0 24 3.193158976209369E-4 0.0 0.0 18.033844291988842 0.0 25 3.193158976209369E-4 0.0 0.0 18.269020450586662 0.0 26 3.193158976209369E-4 0.0 0.0 18.48950807789392 0.0 27 3.193158976209369E-4 0.0 0.0 18.784715625244477 0.0 28 3.193158976209369E-4 0.0 0.0 19.022126995125642 0.0 29 3.193158976209369E-4 0.0 0.0 19.24500949166506 0.0 30 3.193158976209369E-4 0.0 0.0 19.50173947335229 0.0 31 4.789738464314054E-4 0.0 0.0 19.731806577588173 0.0 32 4.789738464314054E-4 0.0 0.0 19.98646100594087 0.0 33 4.789738464314054E-4 0.0 0.0 20.23472911634115 0.0 34 4.789738464314054E-4 0.0 0.0 20.474216039556854 0.0 35 4.789738464314054E-4 0.0 0.0 20.725836966882152 0.0 36 4.789738464314054E-4 0.0 0.0 20.985440791647974 0.0 37 4.789738464314054E-4 0.0 0.0 21.242490089232827 0.0 38 4.789738464314054E-4 0.0 0.0 21.470641298082988 0.0 39 4.789738464314054E-4 0.0 0.0 21.72785025361665 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAATGCG 30 2.1639135E-6 45.000004 1 CTCGAGT 30 2.1639135E-6 45.000004 18 CGATACC 30 2.1639135E-6 45.000004 34 TAGTCGG 30 2.1639135E-6 45.000004 2 TTGGACG 20 7.030825E-4 45.0 1 CGTTGAT 20 7.030825E-4 45.0 25 ATAGCCG 25 3.888765E-5 45.0 1 CATTACG 25 3.888765E-5 45.0 35 CGTTACC 20 7.030825E-4 45.0 41 TACGACG 20 7.030825E-4 45.0 1 CTCTCGA 20 7.030825E-4 45.0 11 AGAATCG 25 3.888765E-5 45.0 28 TATCCGA 25 3.888765E-5 45.0 12 GATGAAT 2235 0.0 42.684563 20 CGATGAA 2175 0.0 42.517242 19 CGATCGA 85 0.0 42.35294 41 CCGATGA 2185 0.0 42.21968 18 CGTTTTT 2400 0.0 42.1875 1 TACGGCT 1445 0.0 41.730103 7 TGATACC 1850 0.0 41.472973 4 >>END_MODULE