##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551873_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 314461 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.64549816988434 30.0 25.0 31.0 16.0 33.0 2 27.828605137044022 30.0 25.0 33.0 16.0 33.0 3 27.596916628771137 30.0 25.0 33.0 16.0 34.0 4 31.745189387555214 35.0 28.0 35.0 19.0 37.0 5 33.317702354187006 35.0 32.0 35.0 28.0 37.0 6 33.21499963429487 35.0 32.0 35.0 28.0 37.0 7 33.95228025096912 35.0 33.0 36.0 31.0 37.0 8 33.66260680974747 35.0 33.0 37.0 28.0 37.0 9 35.9588152425897 39.0 35.0 39.0 30.0 39.0 10 35.36091598004204 37.0 34.0 39.0 31.0 39.0 11 36.1131110058163 37.0 35.0 39.0 32.0 39.0 12 36.14286668299089 37.0 35.0 39.0 32.0 39.0 13 36.119353433335135 37.0 35.0 39.0 32.0 39.0 14 37.16134592206983 39.0 36.0 40.0 32.0 41.0 15 37.23060411306967 39.0 36.0 40.0 32.0 41.0 16 36.91510552977953 38.0 35.0 40.0 32.0 41.0 17 36.81687077252823 38.0 35.0 40.0 31.0 41.0 18 36.81502634666938 38.0 35.0 40.0 32.0 41.0 19 36.469651244510445 38.0 34.0 40.0 31.0 41.0 20 36.40775485672309 38.0 35.0 40.0 30.0 41.0 21 36.90494210728834 39.0 35.0 40.0 32.0 41.0 22 37.156391412607604 39.0 35.0 40.0 32.0 41.0 23 37.43459443301395 39.0 35.0 40.0 32.0 41.0 24 37.47888927402762 39.0 35.0 41.0 32.0 41.0 25 36.7092485236643 38.0 35.0 40.0 31.0 41.0 26 36.897771106750916 39.0 35.0 40.0 31.0 41.0 27 37.0593269117633 39.0 35.0 40.0 32.0 41.0 28 37.0144533026353 39.0 35.0 40.0 31.0 41.0 29 37.05090297365969 39.0 35.0 41.0 31.0 41.0 30 36.79439739745151 39.0 35.0 40.0 31.0 41.0 31 36.94481032624078 39.0 35.0 40.0 31.0 41.0 32 36.706322882646816 39.0 35.0 40.0 31.0 41.0 33 36.6301862552113 39.0 35.0 41.0 30.0 41.0 34 36.56906261825791 39.0 35.0 41.0 30.0 41.0 35 36.420182470958245 39.0 35.0 41.0 30.0 41.0 36 36.42125414598313 39.0 35.0 41.0 30.0 41.0 37 36.299795523133234 39.0 35.0 41.0 30.0 41.0 38 36.21968383996744 39.0 35.0 41.0 30.0 41.0 39 36.03970285663405 39.0 35.0 41.0 29.0 41.0 40 35.945322313418835 39.0 35.0 40.0 28.0 41.0 41 35.84645790733986 39.0 35.0 40.0 26.0 41.0 42 36.067089400593396 39.0 35.0 40.0 29.0 41.0 43 36.04842571892858 39.0 35.0 41.0 29.0 41.0 44 36.290716495845274 39.0 35.0 41.0 30.0 41.0 45 36.32841592439126 39.0 35.0 41.0 30.0 41.0 46 36.13991242157215 39.0 35.0 40.0 29.0 41.0 47 35.92846807712244 39.0 35.0 41.0 27.0 41.0 48 36.01638676974251 39.0 35.0 40.0 29.0 41.0 49 36.06922957059858 39.0 35.0 40.0 29.0 41.0 50 35.90742572210863 39.0 35.0 40.0 28.0 41.0 51 35.06600818543476 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 16.0 11 7.0 12 8.0 13 8.0 14 15.0 15 15.0 16 35.0 17 74.0 18 115.0 19 297.0 20 736.0 21 1302.0 22 1626.0 23 2167.0 24 2779.0 25 3563.0 26 4089.0 27 4127.0 28 4225.0 29 4716.0 30 5946.0 31 7799.0 32 11020.0 33 16229.0 34 21670.0 35 26033.0 36 38282.0 37 61670.0 38 73403.0 39 22481.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.85502494744976 16.365781448255902 19.433888463116254 15.345305141178079 2 30.53001803085279 33.12716044278941 19.68479398081161 16.65802754554619 3 27.246303993181986 32.342007434944236 24.683188058296576 15.7285005135772 4 24.9547638657894 20.471537010948893 37.62247146704997 16.95122765621174 5 32.55125436858625 24.222717602500786 23.93905762558791 19.286970403325054 6 22.127386225954886 38.75393133011725 25.835954220078168 13.282728223849698 7 66.37611659315463 5.626452882869418 22.884554841458876 5.1128756825170685 8 63.83780500602618 15.995624258652105 13.917783127319444 6.248787608002264 9 57.77854805524374 9.147080242064993 14.427862278629147 18.646509424062124 10 35.3481035804122 27.32008102753601 22.51312563402139 14.818689758030407 11 31.67419807225697 22.51566966968877 27.527737938885906 18.282394319168354 12 25.74500494496933 19.238951730103256 30.72749879953317 24.288544525394247 13 24.764915204111162 21.124082159631875 36.712660711503176 17.398341924753787 14 19.503531439510784 29.06242745523292 29.003278625966335 22.43076247928996 15 16.13650023373328 24.93250355369982 38.763153459411505 20.167842753155398 16 18.186356972724756 25.67281793290742 29.12062227112424 27.020202823243583 17 18.59626471963137 27.50420560896264 32.953212004032295 20.946317667373695 18 18.273490194332524 25.514133708154592 32.529630065413514 23.68274603209937 19 19.42244030261304 27.051685264627412 29.19885136789618 24.327023064863372 20 21.75086894718264 27.318809009702317 34.563586581483875 16.366735461631173 21 21.14729648509672 31.16189288973831 30.294694731620137 17.396115893544827 22 18.416910205081074 22.794559579725306 34.162900963871515 24.625629251322103 23 20.617501057364823 28.301760790686288 32.331831292274714 18.74890685967417 24 20.97557407754857 25.400606116497755 29.321919093305688 24.301900712647992 25 17.40024995150432 34.35561166567555 27.950683868587838 20.29345451423229 26 17.87980067480546 26.350803438264204 32.5350361412067 23.234359745723633 27 22.71124241161861 28.2934926747673 27.864186655896916 21.131078257717174 28 17.585964555223065 28.013966755813918 33.43180871395817 20.968259975004848 29 20.466766944072557 27.177615030162723 31.40230426030573 20.953313765458994 30 18.140564330711918 34.04364929196307 29.88637700700564 17.92940937031937 31 23.226409634263074 25.466433039391212 26.581992679537368 24.72516464680835 32 22.92812145226276 29.605897074676985 28.704036430590758 18.761945042469495 33 21.385163819996755 28.013012742438647 25.752637051971465 24.849186385593125 34 20.53322987588286 27.229449756885593 27.12673431681512 25.11058605041643 35 19.905171070498408 28.332607223153268 25.962201990071897 25.800019716276424 36 24.665061804166495 30.15922483233215 24.900703107857574 20.27501025564378 37 18.807419680023916 27.828570156553596 32.814562060160085 20.549448103262407 38 22.350307351309066 28.00697065772862 25.772035323935246 23.870686667027073 39 21.680907966329688 25.6400634736899 29.888603038214594 22.790425521765815 40 18.884694763420583 27.688012185930848 29.07959969598774 24.347693354660834 41 21.574376472758146 26.41599435224082 25.26927027516926 26.740358899831772 42 18.847170237326726 24.184557067490086 32.396068192876065 24.57220450230712 43 24.814841904083494 25.878884821965205 26.41408632549028 22.892186948461017 44 21.517771679158944 25.127758291171244 29.734052871421255 23.620417158248557 45 19.927431382587983 23.362515542467904 28.408292284257826 28.301760790686288 46 24.69845227230086 28.028912965359776 26.828128130356387 20.444506631982982 47 17.72747653922108 26.2108814765583 35.47371534148909 20.58792664273153 48 21.567698379131276 26.148552602707493 27.516607782841117 24.76714123532012 49 19.657763601845698 22.891868944002596 34.03124711808459 23.419120336067113 50 21.442404622512807 23.449012755158826 29.783979571393594 25.324603050934773 51 19.80881571959639 23.400676077478604 27.631407392331642 29.159100810593365 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 127.0 1 286.5 2 446.0 3 2620.5 4 4795.0 5 3233.0 6 1671.0 7 1570.0 8 1469.0 9 1455.0 10 1441.0 11 1356.0 12 1271.0 13 1237.0 14 1203.0 15 1177.5 16 1152.0 17 1078.0 18 1004.0 19 1095.0 20 1186.0 21 1208.5 22 1231.0 23 1245.5 24 1260.0 25 1746.0 26 2584.0 27 2936.0 28 3680.0 29 4424.0 30 4938.5 31 5453.0 32 6363.0 33 7273.0 34 8049.5 35 8826.0 36 9370.5 37 9915.0 38 10992.5 39 12070.0 40 13194.0 41 14318.0 42 14986.0 43 15654.0 44 16867.5 45 18081.0 46 36183.0 47 54285.0 48 41517.5 49 28750.0 50 28491.0 51 28232.0 52 24040.5 53 19849.0 54 17767.0 55 15685.0 56 13794.0 57 11903.0 58 11228.5 59 10554.0 60 9708.0 61 8862.0 62 7553.0 63 6244.0 64 5229.5 65 4215.0 66 3391.0 67 2567.0 68 1986.0 69 1405.0 70 1224.0 71 1043.0 72 834.0 73 625.0 74 499.5 75 283.5 76 193.0 77 148.0 78 103.0 79 97.0 80 91.0 81 62.5 82 34.0 83 20.0 84 6.0 85 4.0 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 314461.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.57092774166435 #Duplication Level Percentage of deduplicated Percentage of total 1 73.64504043266462 23.986872904642684 2 10.041564592357705 6.541261495018761 3 3.508508810854056 3.4282616087796045 4 1.8427637586162777 2.4008210090739435 5 1.2750881866021861 2.076540259503481 6 0.9733004070148886 1.9020778336688666 7 0.8553849001171608 1.9502475841118774 8 0.7414667986652851 1.9320209217736146 9 0.6715170992473738 1.968474142519043 >10 6.338441904328403 37.334611755385325 >50 0.06495329083724388 1.387175395798897 >100 0.03197700471987391 2.3056664720411515 >500 0.0 0.0 >1k 0.006994969782472419 4.4040052277228705 >5k 0.002997844192488179 8.381963389959877 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCG 9196 2.924368999653375 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGC 8437 2.6830036157106925 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTC 8120 2.582196202390757 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2971 0.9447912459732686 No Hit GCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 2509 0.7978731861820703 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGTACCGT 2191 0.696747768403713 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCT 1663 0.5288414143566292 No Hit GAACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCT 1596 0.5075351156423213 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGTACCGTCGTA 1353 0.43026003224565207 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTC 1248 0.3968695641112888 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCAAGTACCG 495 0.157412206919141 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATG 476 0.1513701222091134 No Hit CCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGC 469 0.14914409100015583 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAAGTACCGTCGT 409 0.13006382349480541 No Hit CTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTTCTGCT 405 0.12879180566111537 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCC 356 0.11320958719841251 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAGTACCGTCGTATGCCGTCTT 343 0.10907552923891993 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 328 0.10430546236258231 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13419788145429798 0.0 2 0.0 0.0 0.0 1.2259071872187648 0.0 3 0.0 0.0 0.0 1.4660005533277576 0.0 4 0.0 0.0 0.0 2.2982182210194586 0.0 5 0.0 0.0 0.0 5.727260296189352 0.0 6 0.0 0.0 0.0 6.289492178680345 0.0 7 0.0 0.0 0.0 7.250819656491584 0.0 8 0.0 0.0 0.0 8.207377067426485 0.0 9 3.180044584225071E-4 0.0 0.0 8.457010567288153 0.0 10 3.180044584225071E-4 0.0 0.0 12.089893500306875 0.0 11 3.180044584225071E-4 0.0 0.0 13.101783687007291 0.0 12 3.180044584225071E-4 0.0 0.0 16.62368306403656 0.0 13 3.180044584225071E-4 0.0 0.0 17.108639863130882 3.180044584225071E-4 14 3.180044584225071E-4 0.0 0.0 17.344917175738804 3.180044584225071E-4 15 3.180044584225071E-4 0.0 0.0 18.063289247315247 3.180044584225071E-4 16 3.180044584225071E-4 0.0 0.0 18.684351954614403 3.180044584225071E-4 17 3.180044584225071E-4 0.0 0.0 19.35470535296905 3.180044584225071E-4 18 3.180044584225071E-4 0.0 0.0 19.956687792762853 3.180044584225071E-4 19 3.180044584225071E-4 0.0 0.0 21.11581404371289 3.180044584225071E-4 20 3.180044584225071E-4 0.0 0.0 21.714616438922473 3.180044584225071E-4 21 3.180044584225071E-4 0.0 0.0 22.228193639274824 3.180044584225071E-4 22 3.180044584225071E-4 0.0 0.0 22.866428587328794 3.180044584225071E-4 23 3.180044584225071E-4 0.0 0.0 23.43502055898824 3.180044584225071E-4 24 3.180044584225071E-4 0.0 0.0 23.88340684536397 3.180044584225071E-4 25 3.180044584225071E-4 0.0 0.0 24.28027640947526 3.180044584225071E-4 26 3.180044584225071E-4 0.0 0.0 24.659019719456467 3.180044584225071E-4 27 3.180044584225071E-4 0.0 0.0 25.114402103917495 3.180044584225071E-4 28 3.180044584225071E-4 0.0 0.0 25.526853886491487 3.180044584225071E-4 29 3.180044584225071E-4 0.0 0.0 25.95584190090345 3.180044584225071E-4 30 3.180044584225071E-4 0.0 0.0 26.42521648153507 3.180044584225071E-4 31 3.180044584225071E-4 0.0 0.0 26.828128130356387 3.180044584225071E-4 32 3.180044584225071E-4 0.0 0.0 27.264430247312067 3.180044584225071E-4 33 3.180044584225071E-4 0.0 0.0 27.677518038802905 3.180044584225071E-4 34 3.180044584225071E-4 0.0 0.0 28.110004102257513 3.180044584225071E-4 35 3.180044584225071E-4 0.0 0.0 28.556482361882715 3.180044584225071E-4 36 3.180044584225071E-4 0.0 0.0 29.01536279538639 3.180044584225071E-4 37 3.180044584225071E-4 0.0 0.0 29.471381188764266 3.180044584225071E-4 38 3.180044584225071E-4 0.0 0.0 29.920085479598423 3.180044584225071E-4 39 3.180044584225071E-4 0.0 0.0 30.405042278692747 3.180044584225071E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACCC 30 2.1604537E-6 45.000004 34 CTACGAA 65 0.0 45.000004 11 TACGAAT 65 0.0 45.000004 12 TGCTATA 30 2.1604537E-6 45.000004 32 AGCGTTC 20 7.025463E-4 45.0 7 ATTAGTC 25 3.8843227E-5 45.0 31 GCGACAC 20 7.025463E-4 45.0 33 CTCAACG 20 7.025463E-4 45.0 1 GTCGAAT 95 0.0 45.0 43 GTACACG 20 7.025463E-4 45.0 1 CGGCCTT 25 3.8843227E-5 45.0 44 GCGAACC 35 1.2081728E-7 45.0 33 TAGCGCG 25 3.8843227E-5 45.0 1 ACTCTCG 20 7.025463E-4 45.0 33 TTGTCCG 20 7.025463E-4 45.0 25 TTCGTAC 20 7.025463E-4 45.0 33 CGATTGG 25 3.8843227E-5 45.0 2 ACGGGCC 40 6.7884685E-9 45.0 5 CCGTCGA 95 0.0 45.0 41 CCCACGC 20 7.025463E-4 45.0 39 >>END_MODULE