##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551870_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 352899 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.662169629270696 30.0 25.0 31.0 16.0 33.0 2 27.75324101230097 30.0 25.0 33.0 16.0 33.0 3 27.52664926792085 30.0 25.0 33.0 16.0 34.0 4 31.735255696389054 35.0 28.0 35.0 19.0 37.0 5 33.287977579987476 35.0 32.0 35.0 28.0 37.0 6 33.22573030810515 35.0 32.0 35.0 28.0 37.0 7 33.8622552061638 35.0 33.0 36.0 30.0 37.0 8 33.697958906089276 35.0 33.0 37.0 28.0 37.0 9 35.88950379570359 39.0 35.0 39.0 30.0 39.0 10 35.358706032037496 37.0 34.0 39.0 31.0 39.0 11 36.1024854136736 37.0 35.0 39.0 32.0 39.0 12 36.17632523753255 37.0 35.0 39.0 32.0 39.0 13 36.19107733374138 37.0 35.0 39.0 32.0 39.0 14 37.19293622254526 39.0 36.0 40.0 32.0 41.0 15 37.29777358394328 39.0 36.0 40.0 32.0 41.0 16 36.96621979659903 38.0 35.0 40.0 32.0 41.0 17 36.905239176081544 38.0 35.0 40.0 32.0 41.0 18 36.822031232732314 38.0 35.0 40.0 32.0 41.0 19 36.46249210113942 38.0 34.0 40.0 31.0 41.0 20 36.50244970940694 38.0 35.0 40.0 31.0 41.0 21 36.89853470823097 39.0 35.0 40.0 32.0 41.0 22 37.231689520231 39.0 35.0 40.0 32.0 41.0 23 37.51350669738367 39.0 36.0 40.0 33.0 41.0 24 37.5129427966642 39.0 36.0 41.0 33.0 41.0 25 36.75156064483039 38.0 35.0 40.0 31.0 41.0 26 36.960577955732376 39.0 35.0 40.0 32.0 41.0 27 37.19291071949765 39.0 35.0 40.0 32.0 41.0 28 37.092924604490236 39.0 35.0 40.0 31.0 41.0 29 37.170791076200274 39.0 35.0 41.0 31.0 41.0 30 36.81863082638375 39.0 35.0 40.0 31.0 41.0 31 36.88063723614972 39.0 35.0 40.0 31.0 41.0 32 36.79251287195486 39.0 35.0 40.0 31.0 41.0 33 36.78231448658115 39.0 35.0 41.0 31.0 41.0 34 36.739571378779765 40.0 35.0 41.0 31.0 41.0 35 36.71136500811847 40.0 35.0 41.0 30.0 41.0 36 36.543444441610774 40.0 35.0 41.0 30.0 41.0 37 36.53039254857622 40.0 35.0 41.0 30.0 41.0 38 36.3984794516278 39.0 35.0 41.0 30.0 41.0 39 36.38647885088935 39.0 35.0 41.0 30.0 41.0 40 36.26848475059436 39.0 35.0 40.0 29.0 41.0 41 36.034397943887626 39.0 35.0 40.0 28.0 41.0 42 36.1868920002607 39.0 35.0 41.0 29.0 41.0 43 36.225429938877696 39.0 35.0 41.0 30.0 41.0 44 36.37262786236288 39.0 35.0 41.0 31.0 41.0 45 36.37025891260672 39.0 35.0 41.0 30.0 41.0 46 36.22665125149122 39.0 35.0 40.0 30.0 41.0 47 35.94153851385241 39.0 35.0 40.0 28.0 41.0 48 36.12718653212392 39.0 35.0 40.0 30.0 41.0 49 36.10585181595867 39.0 35.0 40.0 30.0 41.0 50 35.92316498488236 39.0 35.0 40.0 29.0 41.0 51 35.068793054103296 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 8.0 10 7.0 11 20.0 12 10.0 13 9.0 14 15.0 15 27.0 16 48.0 17 72.0 18 167.0 19 383.0 20 749.0 21 1096.0 22 1595.0 23 2167.0 24 2818.0 25 3497.0 26 4306.0 27 4684.0 28 4841.0 29 5409.0 30 6712.0 31 8720.0 32 12114.0 33 18215.0 34 24582.0 35 29306.0 36 43306.0 37 69477.0 38 83317.0 39 25221.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.16051618168371 17.697981575464937 19.312324489443156 16.829177753408196 2 30.115982193205422 32.170394362126274 20.0077075877234 17.705915856944905 3 27.762050898415698 30.870305668194014 25.445524073460113 15.922119359930178 4 25.791515419425952 21.06693416529942 35.435634558329724 17.705915856944905 5 31.361097651169317 23.836565136200445 24.686383356144393 20.11595385648585 6 22.408111102610096 36.715320814170624 26.043995590806436 14.832572492412844 7 66.02030609324481 6.485141641092778 21.936304721747582 5.558247543914831 8 64.17841932110888 14.13803949571974 14.660851971810631 7.022689211360758 9 57.99166333710212 9.23266997072817 15.276325520899746 17.49934117126997 10 34.4900382262347 27.60704904236056 22.60561803802221 15.297294693382527 11 29.86010161547638 23.16866865590438 27.99809577244481 18.97313395617443 12 26.402455093383658 19.183959149785064 31.63313015905401 22.78045559777727 13 24.554900977333457 21.36078594725403 35.57476785142491 18.5095452239876 14 18.81898220170644 29.142332508734793 29.31518649811986 22.72349879143891 15 16.61636898942757 25.505597918951317 38.37698604983296 19.501047041788162 16 18.341225109733948 26.32707941932394 30.398782654527217 24.932912816414895 17 18.468740347804896 27.002626813904264 32.54047191972774 21.9881609185631 18 17.719800849534852 26.482081275379077 32.61074698426462 23.187370890821455 19 19.541851917970867 26.941702866825917 29.61073848324875 23.905706731954467 20 21.54384115568477 26.862643419221932 34.29593169717114 17.297583727922152 21 20.915332715592847 29.684130586938473 31.39680191782918 18.003734779639498 22 18.760041824998087 23.596269754235628 32.645601149337345 24.998087271428936 23 20.472429788693084 28.214588309969706 32.23075157481319 19.08223032652402 24 21.198416544110355 25.015089303171727 29.87426997526204 23.912224177455872 25 18.691183596439775 32.61584759378746 27.87171400315671 20.821254806616057 26 19.941116296730794 25.50984842688701 31.29790676652527 23.251128509856926 27 23.51607683784879 27.447229943978307 27.623200972516216 21.41349224565669 28 17.786675507723174 27.905434699446584 32.63568329748738 21.67220649534286 29 24.5665190323577 24.39593198053834 29.332188529862652 21.70536045724131 30 22.081388725952753 28.461967871827348 29.643892445147195 19.8127509570727 31 21.44182896522801 28.267861342763794 26.408122437297926 23.88218725471027 32 24.10321366736658 32.32624631976855 24.96408320794335 18.60645680492152 33 21.618366728157348 25.33076035919626 26.141190538936073 26.909682373710325 34 23.742487227223652 25.934899220456842 29.614138889597307 20.708474662722196 35 23.97994893723133 27.25964086041615 26.181995415118774 22.57841478723374 36 25.22478102799951 29.193055236767464 25.652665493526477 19.92949824170655 37 21.553759007534733 29.303285075899904 30.539899517992403 18.603056398572964 38 20.228167265988287 29.098693960594957 25.28428813909929 25.388850634317468 39 22.484903612648377 27.084519933465383 29.820996942467957 20.60957951141828 40 19.66369981212755 26.86094321604765 30.685550256588996 22.789806715235805 41 21.93007064344189 27.0377643461727 28.916772220947067 22.11539278943834 42 20.244602563339654 28.160465175588484 31.25455158558114 20.34038067549072 43 26.19673050929586 24.840535110612386 26.245186299762825 22.717548080328935 44 22.97002825170941 23.728602234633705 29.264747137282903 24.036622376373977 45 20.53817097809855 23.645859013485445 28.63255492364671 27.183415084769297 46 25.136370462936984 28.004896585141925 26.335013700803913 20.523719251117175 47 18.70648542500829 24.90712640160499 35.35515827474717 21.031229898639552 48 21.19019889543467 25.60732674221236 28.611869118359646 24.590605243993323 49 19.793481987764206 23.503041946845983 34.69689627910535 22.006579786284462 50 21.43984539485802 22.830328224222797 30.590622246025067 25.139204134894122 51 20.640466535751024 22.024431919614393 28.588916375506873 28.74618516912771 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 156.0 1 291.0 2 426.0 3 2862.5 4 5299.0 5 3582.0 6 1865.0 7 1791.5 8 1718.0 9 1673.0 10 1628.0 11 1554.0 12 1480.0 13 1439.0 14 1398.0 15 1347.5 16 1297.0 17 1204.0 18 1111.0 19 1150.0 20 1189.0 21 1321.5 22 1454.0 23 1347.0 24 1240.0 25 1865.0 26 3271.5 27 4053.0 28 4988.0 29 5923.0 30 6176.5 31 6430.0 32 7102.0 33 7774.0 34 8957.5 35 10141.0 36 10221.5 37 10302.0 38 11443.5 39 12585.0 40 13785.0 41 14985.0 42 16044.5 43 17104.0 44 18963.5 45 20823.0 46 39433.0 47 58043.0 48 45169.5 49 32296.0 50 31822.5 51 31349.0 52 26743.5 53 22138.0 54 19587.0 55 17036.0 56 15760.0 57 14484.0 58 13110.5 59 11737.0 60 10998.0 61 10259.0 62 9426.0 63 8593.0 64 6779.0 65 4965.0 66 4038.5 67 3112.0 68 2541.0 69 1970.0 70 1631.5 71 1293.0 72 1130.5 73 968.0 74 807.5 75 557.0 76 467.0 77 378.0 78 289.0 79 226.0 80 163.0 81 145.0 82 127.0 83 103.0 84 79.0 85 43.5 86 8.0 87 5.0 88 2.0 89 2.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 352899.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.06921967324231 #Duplication Level Percentage of deduplicated Percentage of total 1 75.18793039521708 25.61594117411103 2 9.75729001228452 6.648465136881089 3 3.386372002194155 3.461131549142101 4 1.7573295518986627 2.3948338616766405 5 1.16877015394652 1.9909543561166607 6 0.9048275360821256 1.8496060855908314 7 0.7238066656325216 1.7261669804673994 8 0.6337373758976185 1.727275029968008 9 0.556185977055795 1.7053940008341706 >10 5.80117272845639 37.005281762728046 >50 0.07754909472190177 1.753971755293066 >100 0.03335444934275345 2.116186524972149 >500 0.0033354449342753454 0.636361634573448 >1k 0.005837028634981855 4.166748256378911 >5k 0.002501583700706509 7.201681891266476 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCG 8715 2.4695451106407216 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTC 8700 2.4652946027050233 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGC 7935 2.248518697984409 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3219 0.9121590030008586 No Hit GCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC 2544 0.7208861458944343 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGAACTAGT 2156 0.6109396739577045 No Hit GAACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCT 2069 0.5862867279306544 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCT 1815 0.5143114602194963 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTC 1450 0.41088243378417055 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTA 1414 0.40068121473849455 No Hit CCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC 642 0.1819217396478879 No Hit CTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGCT 554 0.15698542642512447 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATG 528 0.14961787933658072 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGGAACTAG 516 0.14621747298802207 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCC 468 0.13261584759378747 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTT 430 0.12184789415668505 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGAACTAGTCGT 430 0.12184789415668505 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.8336719571322105E-4 0.0 0.0 0.16066919996939635 0.0 2 2.8336719571322105E-4 0.0 0.0 1.2553166770095694 0.0 3 2.8336719571322105E-4 0.0 0.0 1.533016528808526 0.0 4 2.8336719571322105E-4 0.0 0.0 2.5049660101048743 0.0 5 2.8336719571322105E-4 0.0 0.0 6.042522081388726 0.0 6 2.8336719571322105E-4 0.0 0.0 6.763691594478874 0.0 7 2.8336719571322105E-4 0.0 0.0 7.840770305384827 0.0 8 2.8336719571322105E-4 0.0 0.0 9.002859175004746 0.0 9 2.8336719571322105E-4 0.0 0.0 9.356784802450559 0.0 10 2.8336719571322105E-4 0.0 0.0 12.623158467436859 0.0 11 2.8336719571322105E-4 0.0 0.0 13.800549165625291 0.0 12 2.8336719571322105E-4 0.0 0.0 17.055588142783062 0.0 13 2.8336719571322105E-4 0.0 0.0 17.654059660129384 0.0 14 2.8336719571322105E-4 0.0 0.0 17.927792371188357 0.0 15 2.8336719571322105E-4 0.0 0.0 18.667380751999865 0.0 16 2.8336719571322105E-4 0.0 0.0 19.35511293599585 0.0 17 2.8336719571322105E-4 0.0 0.0 20.08506683215311 0.0 18 2.8336719571322105E-4 0.0 0.0 20.75636371879773 0.0 19 2.8336719571322105E-4 0.0 0.0 21.912785244503386 0.0 20 2.8336719571322105E-4 0.0 0.0 22.590316209453697 0.0 21 2.8336719571322105E-4 0.0 0.0 23.1862374220386 0.0 22 2.8336719571322105E-4 0.0 0.0 23.937160490678636 0.0 23 2.8336719571322105E-4 0.0 0.0 24.521180281043584 0.0 24 2.8336719571322105E-4 0.0 0.0 24.978534934924724 0.0 25 2.8336719571322105E-4 0.0 0.0 25.428238674521605 0.0 26 2.8336719571322105E-4 0.0 0.0 25.838837741110062 0.0 27 2.8336719571322105E-4 0.0 0.0 26.33104656006393 0.0 28 2.8336719571322105E-4 0.0 0.0 26.74362919702238 0.0 29 2.8336719571322105E-4 0.0 0.0 27.193049569423547 0.0 30 2.8336719571322105E-4 0.0 0.0 27.693192669857382 0.0 31 2.8336719571322105E-4 0.0 0.0 28.18058424648412 0.0 32 2.8336719571322105E-4 0.0 0.0 28.635671962799556 0.0 33 2.8336719571322105E-4 0.0 0.0 29.073190912980767 0.0 34 2.8336719571322105E-4 0.0 0.0 29.510426495966268 0.0 35 2.8336719571322105E-4 0.0 0.0 30.020487448250066 0.0 36 2.8336719571322105E-4 0.0 0.0 30.513829735986782 0.0 37 2.8336719571322105E-4 0.0 0.0 30.98676958563215 0.0 38 2.8336719571322105E-4 0.0 0.0 31.43959036438188 0.0 39 2.8336719571322105E-4 0.0 0.0 31.901478893394426 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCCG 25 3.885293E-5 45.0 4 ATTTACG 25 3.885293E-5 45.0 35 CGGGTGA 25 3.885293E-5 45.0 6 TTTACGC 25 3.885293E-5 45.0 36 CGTTGAT 20 7.026635E-4 45.0 25 ATAGCGG 25 3.885293E-5 45.0 2 TCTAGTA 55 1.8189894E-12 45.0 19 TTCCCGT 20 7.026635E-4 45.0 38 TCGTGTA 25 3.885293E-5 45.0 17 CGAATAC 20 7.026635E-4 45.0 45 TGCTCGG 40 6.7921064E-9 45.0 2 CGTAAGG 20 7.026635E-4 45.0 2 TTACGCA 25 3.885293E-5 45.0 37 TAAGGGC 45 3.8380676E-10 45.0 4 GCTAACG 45 3.8380676E-10 45.0 1 TATCGTG 25 3.885293E-5 45.0 1 AGTACGG 20 7.026635E-4 45.0 2 AGTCGAA 35 1.2087366E-7 45.0 42 GTGCTCG 30 2.1612104E-6 44.999996 1 ATCGCGG 30 2.1612104E-6 44.999996 2 >>END_MODULE