##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551868_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 353352 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.695066109714958 30.0 25.0 31.0 16.0 33.0 2 27.864398673277638 30.0 25.0 33.0 16.0 33.0 3 27.76338608526342 30.0 25.0 33.0 16.0 34.0 4 31.72439380561027 35.0 28.0 35.0 19.0 37.0 5 33.348270280060675 35.0 32.0 35.0 28.0 37.0 6 33.27022062985352 35.0 33.0 35.0 28.0 37.0 7 33.83522096945822 35.0 33.0 36.0 30.0 37.0 8 33.516827412891395 35.0 33.0 37.0 28.0 37.0 9 35.73445176481243 38.0 35.0 39.0 28.0 39.0 10 35.33143154701261 37.0 34.0 39.0 31.0 39.0 11 36.10327944938758 37.0 35.0 39.0 32.0 39.0 12 36.14235380017659 37.0 35.0 39.0 32.0 39.0 13 36.20748432158301 37.0 35.0 39.0 32.0 39.0 14 37.249569834046504 39.0 36.0 40.0 32.0 41.0 15 37.32123208585207 39.0 36.0 40.0 32.0 41.0 16 36.89986755416695 38.0 35.0 40.0 32.0 41.0 17 36.863125155652156 38.0 35.0 40.0 32.0 41.0 18 36.817674726618215 38.0 35.0 40.0 32.0 41.0 19 36.45678813194775 38.0 34.0 40.0 31.0 41.0 20 36.42396533768027 38.0 35.0 40.0 31.0 41.0 21 36.83180794222192 38.0 35.0 40.0 32.0 41.0 22 37.1864995811542 39.0 35.0 40.0 32.0 41.0 23 37.42866320269872 39.0 35.0 40.0 32.0 41.0 24 37.46054925400168 39.0 35.0 41.0 33.0 41.0 25 36.70923611582784 38.0 35.0 40.0 31.0 41.0 26 36.91724682469605 39.0 35.0 40.0 32.0 41.0 27 37.13478344540288 39.0 35.0 40.0 32.0 41.0 28 37.03181247028459 39.0 35.0 40.0 31.0 41.0 29 37.16771944123707 39.0 35.0 41.0 32.0 41.0 30 36.69982906563427 39.0 35.0 40.0 31.0 41.0 31 36.992262672915395 39.0 35.0 40.0 32.0 41.0 32 36.846190201272385 39.0 35.0 40.0 31.0 41.0 33 36.68340068826553 39.0 35.0 41.0 30.0 41.0 34 36.56327401571238 39.0 35.0 41.0 30.0 41.0 35 36.43905227648351 39.0 35.0 41.0 30.0 41.0 36 36.30226516334986 39.0 35.0 41.0 30.0 41.0 37 36.24041465733886 39.0 35.0 41.0 30.0 41.0 38 36.262452172338065 39.0 35.0 41.0 30.0 41.0 39 36.17512848377822 39.0 35.0 41.0 30.0 41.0 40 35.92023534605719 39.0 35.0 40.0 27.0 41.0 41 35.747198261223936 39.0 35.0 40.0 26.0 41.0 42 35.972876904616356 39.0 35.0 40.0 28.0 41.0 43 35.966011229595416 39.0 35.0 40.0 28.0 41.0 44 36.13392594353506 39.0 35.0 40.0 29.0 41.0 45 36.19476612556318 39.0 35.0 40.0 30.0 41.0 46 36.01375682039439 39.0 35.0 40.0 29.0 41.0 47 35.74857366025946 39.0 35.0 40.0 26.0 41.0 48 35.90091466865901 39.0 35.0 40.0 29.0 41.0 49 35.93460628495098 39.0 35.0 40.0 29.0 41.0 50 35.742650388281376 39.0 35.0 40.0 28.0 41.0 51 34.805581969254455 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 11.0 10 8.0 11 9.0 12 10.0 13 15.0 14 20.0 15 17.0 16 40.0 17 65.0 18 166.0 19 416.0 20 777.0 21 1136.0 22 1628.0 23 2168.0 24 2988.0 25 4118.0 26 4699.0 27 5050.0 28 5235.0 29 5642.0 30 6917.0 31 9019.0 32 12559.0 33 18253.0 34 24147.0 35 29530.0 36 43218.0 37 69445.0 38 81736.0 39 24309.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.581448527247616 16.09924381353438 19.088897190337114 17.230410468880887 2 30.967703593017724 32.44809708166361 19.781690778600375 16.802508546718286 3 26.55425751092395 30.76535579252417 26.41700061128846 16.26338608526342 4 25.293475061694853 20.011206955104257 37.42245692680387 17.27286105639702 5 31.338155720075168 24.09127442323802 25.396771491317438 19.173798365369375 6 21.42169847630691 37.68848060857162 27.015270891349136 13.874550023772327 7 63.14100387149358 6.5671058887455 24.019391428377368 6.272498811383549 8 60.50114333582377 15.609081029681452 15.97896714890534 7.910808485589441 9 55.18802780230479 8.821798093685617 17.008252394213137 18.981921709796463 10 34.77410627363083 23.701012022006385 25.39733749915099 16.127544205211798 11 29.4505195951912 22.723233489551493 28.50302248183115 19.32322443342616 12 24.93830514614322 18.50958817270031 32.82930335755847 23.722803323598 13 24.097217505490278 21.32151508976884 37.29595417600579 17.285313228735085 14 19.091444225588084 28.5287758382576 29.449670583440874 22.93010935271344 15 16.506769453689238 24.24692657746383 39.13066856845299 20.11563540039394 16 17.72396929973511 25.642984898911003 30.20812108039575 26.42492472095814 17 18.34686092055514 26.9564060766601 33.26512938939075 21.43160361339401 18 17.37049740768412 25.538556453621318 34.00659965133917 23.084346487355383 19 18.521191333288055 27.04357128302656 30.32047363535511 24.114763748330276 20 20.582025855237838 26.15890103919038 37.03502456473998 16.224048540831806 21 20.45863614752428 30.17302859471575 32.05641966084811 17.311915596911863 22 18.054234870610607 23.080101428603772 33.94631981706627 24.91934388371935 23 19.10814145667776 28.421800357716954 32.63374765106749 19.836310534537798 24 20.939742806040435 24.34484593266771 30.627532885055132 24.087878376236727 25 16.88939074916797 33.11428830175009 28.511229595417603 21.485091353664334 26 18.606658516153864 24.331827752496093 33.22465982929204 23.836853902058007 27 21.90110711132242 26.77811360909235 29.605888745500238 21.71489053408499 28 16.223482532998258 25.87702913808327 34.04282415268627 23.856664176232197 29 24.612850641852884 21.556691344608208 31.321741492902262 22.508716520636646 30 18.226584255926102 27.767778306051756 34.45770789467726 19.547929543344882 31 21.596594896873373 24.88708143720709 26.435961873712333 27.080361792207203 32 25.711471846770362 27.61750322624465 27.57109058389368 19.099934343091306 33 20.194876497090718 23.767234938531548 30.584799293622222 25.45308927075551 34 23.980902895696076 27.43722973125948 27.32883923113496 21.253028141909482 35 21.039360184744957 26.108809345921348 30.29245624759447 22.55937422173923 36 25.007924109669677 24.767370780411603 27.333933301636893 22.890771808281826 37 21.448017840566912 25.136973895718718 34.18998618940886 19.22502207430551 38 20.31515316171976 24.851422943693542 28.531888881342116 26.30153501324458 39 26.003531888881344 26.071452828907155 27.953711879372413 19.971303402839094 40 19.579908985940364 26.5460503973375 33.33644637641785 20.537594240304287 41 21.763567207770155 29.690789920532502 26.286252801738776 22.259390069958567 42 20.689567343612037 25.838540605401978 32.41272159206684 21.05917045891915 43 26.692646426226542 22.480416128959224 27.46156806810206 23.365369376712174 44 21.542824152686276 22.868414498856666 31.553238696823566 24.0355226516335 45 20.179877289501686 22.481265140709546 29.44316149335507 27.895696076433694 46 27.127340442391723 25.90872557676198 26.90971043039236 20.05422355045394 47 18.288279109782877 23.705257080757995 38.009124046276796 19.997339763182325 48 20.894745183273336 25.424222871244538 29.140064298489893 24.540967646992236 49 20.260533405782336 22.043175077543072 35.61858996128506 22.077701555389524 50 22.188073082931467 21.148033688786253 31.434377051778394 25.229516176503886 51 20.238176096357176 21.291233670674 29.452500622608618 29.01808961036021 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 131.0 1 311.0 2 491.0 3 3244.5 4 5998.0 5 4031.0 6 2064.0 7 2041.0 8 2018.0 9 1937.5 10 1857.0 11 1822.5 12 1788.0 13 1706.0 14 1624.0 15 1552.0 16 1480.0 17 1422.0 18 1364.0 19 1341.0 20 1318.0 21 1395.5 22 1473.0 23 1424.0 24 1375.0 25 1940.5 26 3243.5 27 3981.0 28 4301.5 29 4622.0 30 5297.5 31 5973.0 32 6604.5 33 7236.0 34 7871.5 35 8507.0 36 9668.5 37 10830.0 38 11794.0 39 12758.0 40 13434.0 41 14110.0 42 15774.5 43 17439.0 44 18702.5 45 19966.0 46 40584.5 47 61203.0 48 48206.5 49 35210.0 50 33720.0 51 32230.0 52 27407.5 53 22585.0 54 20048.0 55 17511.0 56 15281.0 57 13051.0 58 11980.0 59 10909.0 60 9964.5 61 9020.0 62 7924.0 63 6828.0 64 5716.0 65 4604.0 66 3733.5 67 2863.0 68 2362.5 69 1862.0 70 1648.0 71 1434.0 72 1250.5 73 1067.0 74 898.0 75 597.5 76 466.0 77 435.0 78 404.0 79 345.5 80 287.0 81 193.5 82 100.0 83 79.0 84 58.0 85 37.0 86 16.0 87 9.5 88 3.0 89 2.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 353352.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.02697130243808 #Duplication Level Percentage of deduplicated Percentage of total 1 75.55873827937143 26.465937573599724 2 10.080386278343926 7.061708017780864 3 3.5670528300244677 3.7482917133464264 4 1.7682329322481154 2.4774337669552264 5 1.1449137589034875 2.0051430688439478 6 0.8419319340538097 1.7694195415625387 7 0.6449223280057773 1.581277311275194 8 0.5565892415384345 1.5596508312490014 9 0.5152657051325275 1.6243377360126803 >10 5.210974265771147 34.19158698827474 >50 0.06886392672689558 1.669453367240516 >100 0.029165898378449892 1.984728344463738 >500 0.004860983063074982 1.0664296709314738 >1k 0.005671146906920812 4.854837363037693 >5k 0.002430491531537491 7.939764705426211 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCG 9555 2.7041024247775587 No Hit GAATCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTC 9351 2.64636962575562 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGC 9073 2.5676945368923905 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3679 1.0411714098123117 No Hit GCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC 3104 0.8784441576671421 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTCGTAAGT 2710 0.7669406144581041 No Hit GAACTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCT 2124 0.6011003192284181 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCT 2075 0.5872331273064819 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTA 1901 0.5379904457877697 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTC 1515 0.42875093391292535 No Hit CCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGC 771 0.21819601983291448 No Hit CTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTTCTGCT 715 0.20234780049355883 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCC 664 0.18791460073807423 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATG 553 0.1565011659761371 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGTCGTAAG 535 0.15140709547420136 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGT 520 0.14716203672258824 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTAT 426 0.12055966854581267 No Hit GAATGCTGTCTCTTATACACATCTGACGCGTCGTAAGTCGTATGCCGTCTT 396 0.11206955104258642 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.21083791799678508 0.0 2 0.0 0.0 0.0 1.5177500056600783 0.0 3 0.0 0.0 0.0 1.8222622201091263 0.0 4 0.0 0.0 0.0 2.8639996377549863 0.0 5 0.0 0.0 0.0 6.595123276506147 0.0 6 0.0 0.0 0.0 7.321877334782314 0.0 7 0.0 0.0 0.0 8.466345174217212 0.0 8 0.0 0.0 0.0 9.694016165183726 0.0 9 0.0 0.0 0.0 10.024281736059226 0.0 10 0.0 0.0 0.0 13.641920804183929 0.0 11 0.0 0.0 0.0 14.98958545586271 0.0 12 0.0 0.0 0.0 18.719577078946774 0.0 13 0.0 0.0 0.0 19.334827594013902 0.0 14 0.0 0.0 0.0 19.672734270642305 0.0 15 0.0 0.0 0.0 20.61994838008558 0.0 16 0.0 0.0 0.0 21.430471597726914 0.0 17 0.0 0.0 0.0 22.304953700559217 0.0 18 0.0 0.0 0.0 23.096232651859903 0.0 19 0.0 0.0 0.0 24.470499671715455 0.0 20 0.0 0.0 0.0 25.183103534152913 0.0 21 0.0 0.0 0.0 25.87504811066585 0.0 22 0.0 0.0 0.0 26.66434603454912 0.0 23 0.0 0.0 0.0 27.323745160633024 0.0 24 0.0 0.0 0.0 27.887205958930473 0.0 25 0.0 0.0 0.0 28.38868889945437 0.0 26 2.8300391677420813E-4 0.0 0.0 28.912246145486655 0.0 27 2.8300391677420813E-4 0.0 0.0 29.452500622608618 0.0 28 2.8300391677420813E-4 0.0 0.0 29.947191469129933 0.0 29 2.8300391677420813E-4 0.0 0.0 30.44669338223641 0.0 30 2.8300391677420813E-4 0.0 0.0 30.968835608684824 0.0 31 2.8300391677420813E-4 0.0 0.0 31.496071905635173 0.0 32 2.8300391677420813E-4 0.0 0.0 32.004629944078424 0.0 33 2.8300391677420813E-4 0.0 0.0 32.47951051642555 0.0 34 2.8300391677420813E-4 0.0 0.0 32.960051167108155 0.0 35 2.8300391677420813E-4 0.0 0.0 33.4686092055514 0.0 36 2.8300391677420813E-4 0.0 0.0 33.99301546333401 0.0 37 2.8300391677420813E-4 0.0 0.0 34.50383753311146 0.0 38 2.8300391677420813E-4 0.0 0.0 34.98041612895923 0.0 39 5.660078335484163E-4 0.0 0.0 35.50793542982635 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGG 35 1.2087366E-7 45.000004 2 CGAAAGG 35 1.2087366E-7 45.000004 2 CGAATAT 70 0.0 45.000004 14 GCGGCTA 35 1.2087366E-7 45.000004 24 TAACGCC 20 7.026649E-4 45.0 12 TTATCGG 20 7.026649E-4 45.0 2 TACATGA 20 7.026649E-4 45.0 38 TCTCGAG 20 7.026649E-4 45.0 1 CATCGTT 20 7.026649E-4 45.0 36 ACGTGCG 25 3.885305E-5 44.999996 1 CCGTTGA 25 3.885305E-5 44.999996 16 CTAGCGG 30 2.1612195E-6 44.999996 2 CGTTTTT 1910 0.0 43.82199 1 TACGGCT 1035 0.0 43.26087 7 ACGGCTG 1070 0.0 42.266354 8 TACGAAT 75 0.0 42.000004 12 GCTACGA 75 0.0 42.000004 10 TAGCGGG 65 0.0 41.538464 3 GACCGAT 65 0.0 41.538464 9 TGATACC 1115 0.0 41.367714 4 >>END_MODULE