##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551866_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 373080 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.619783960544655 28.0 25.0 31.0 16.0 33.0 2 27.854521818376757 31.0 25.0 33.0 16.0 34.0 3 27.696786212072478 31.0 25.0 33.0 16.0 34.0 4 31.694065615953683 35.0 28.0 35.0 19.0 37.0 5 33.331682212930204 35.0 32.0 35.0 28.0 37.0 6 33.1798917122333 35.0 32.0 35.0 28.0 37.0 7 34.01120671169722 35.0 33.0 37.0 31.0 37.0 8 34.06145062721132 35.0 35.0 37.0 31.0 37.0 9 36.371043743969125 39.0 35.0 39.0 32.0 39.0 10 35.510957435402595 37.0 34.0 39.0 31.0 39.0 11 36.10352203280798 37.0 35.0 39.0 32.0 39.0 12 36.17879811300525 37.0 35.0 39.0 32.0 39.0 13 36.28103087809585 37.0 35.0 39.0 32.0 39.0 14 37.31965262142168 39.0 36.0 40.0 32.0 41.0 15 37.38868607269218 39.0 36.0 40.0 32.0 41.0 16 37.04994371180444 38.0 36.0 40.0 32.0 41.0 17 37.03329848825989 38.0 36.0 40.0 32.0 41.0 18 36.97016993674279 38.0 36.0 40.0 32.0 41.0 19 36.626782459526105 38.0 35.0 40.0 31.0 41.0 20 36.66593492012437 38.0 35.0 40.0 31.0 41.0 21 36.99672188270612 39.0 35.0 40.0 32.0 41.0 22 37.31275865766055 39.0 36.0 40.0 32.0 41.0 23 37.61596976519781 39.0 36.0 40.0 33.0 41.0 24 37.64914763589579 39.0 36.0 41.0 33.0 41.0 25 36.844711590007506 39.0 35.0 40.0 31.0 41.0 26 37.03698670526428 39.0 35.0 40.0 32.0 41.0 27 37.29779403881205 39.0 35.0 40.0 33.0 41.0 28 37.296695078803474 39.0 35.0 40.0 32.0 41.0 29 37.40190039669776 39.0 36.0 41.0 33.0 41.0 30 37.00258657660555 39.0 35.0 40.0 31.0 41.0 31 37.089766269968905 39.0 35.0 40.0 32.0 41.0 32 37.033539723383726 39.0 36.0 40.0 32.0 41.0 33 37.00309585075587 39.0 36.0 41.0 31.0 41.0 34 36.8869250562882 40.0 36.0 41.0 31.0 41.0 35 36.796920231585716 40.0 36.0 41.0 31.0 41.0 36 36.649241449555056 40.0 35.0 41.0 30.0 41.0 37 36.68175994424788 40.0 36.0 41.0 31.0 41.0 38 36.51854025946178 39.0 35.0 41.0 30.0 41.0 39 36.44911279082234 39.0 35.0 41.0 30.0 41.0 40 36.2991771201887 39.0 35.0 41.0 30.0 41.0 41 36.210724241449554 39.0 35.0 41.0 29.0 41.0 42 36.37511793717165 39.0 35.0 41.0 30.0 41.0 43 36.374941031414174 39.0 35.0 41.0 30.0 41.0 44 36.50498820628283 39.0 35.0 41.0 31.0 41.0 45 36.533847968264176 39.0 35.0 41.0 31.0 41.0 46 36.35347378578321 39.0 35.0 41.0 30.0 41.0 47 36.22609896000858 39.0 35.0 41.0 30.0 41.0 48 36.32058003645331 39.0 35.0 41.0 30.0 41.0 49 36.34324273614238 39.0 35.0 41.0 30.0 41.0 50 36.19077141631821 39.0 35.0 41.0 30.0 41.0 51 35.333389621528895 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 11.0 11 9.0 12 17.0 13 14.0 14 13.0 15 32.0 16 38.0 17 66.0 18 174.0 19 402.0 20 727.0 21 1061.0 22 1546.0 23 2003.0 24 2829.0 25 3801.0 26 4541.0 27 4699.0 28 4928.0 29 5226.0 30 6491.0 31 8600.0 32 12204.0 33 17931.0 34 24590.0 35 30311.0 36 44557.0 37 73403.0 38 93099.0 39 29751.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.57467567277796 17.56057681998499 20.229441406668812 16.635306100568243 2 30.443604588828133 29.987938243808298 22.336764232872305 17.23169293449126 3 28.91899860619706 28.189396376112363 27.342661091454918 15.548943926235658 4 26.120939208748794 21.757531896644153 34.325613809370644 17.79591508523641 5 29.344644580250883 26.141310174761443 25.604159965691004 18.909885279296663 6 21.98590114720703 36.876005146349314 27.077570494263963 14.060523212179692 7 70.63418033665701 5.526964726064115 19.01549265573067 4.823362281548194 8 70.75345770344163 11.343411600729066 12.462742575318966 5.440388120510346 9 65.40581108609413 7.673957328186984 13.03607805296451 13.88415353275437 10 37.14833279725528 26.14640291626461 21.921035702798328 14.784228583681783 11 28.63058861370216 23.14329366355741 29.61643615310389 18.60968156963654 12 24.971051785139917 19.91342339444623 32.37402165755334 22.741503162860514 13 24.53870483542404 21.104052750080413 35.80652943068511 18.550712983810445 14 20.518655516243165 27.418784174975876 30.32807976841428 21.734480540366675 15 18.254797898574033 24.961134341160076 37.015653479146565 19.76841428111933 16 20.388120510346305 25.475233193953038 30.09649404953361 24.040152246167043 17 20.08657660555377 26.265948322075694 32.65331832314785 20.994156749222686 18 19.670043958400342 25.79259140130803 32.308352096065185 22.22901254422644 19 20.873003109252707 27.310496408277046 29.909938887101962 21.906561595368284 20 22.71871984560952 26.502090704406562 34.06159536828562 16.717594081698294 21 22.533504878310282 28.970730138308138 30.92580679746971 17.56995818591187 22 20.277420392409134 23.075479789857404 33.26069475715664 23.38640506057682 23 21.135145277152354 27.49597941460277 32.00519995711375 19.363675351131125 24 21.67551195454058 25.19995711375576 30.105875415460492 23.018655516243165 25 19.1420070762303 30.783210035381153 28.89755548407848 21.177227404310067 26 19.31301597512598 25.628015439047925 32.843089953897284 22.21587863192881 27 23.004717486866088 26.88592259032915 29.179532539937814 20.929827382866943 28 17.694328294199636 27.05532325506594 34.189181944891175 21.06116650584325 29 22.27565133483435 23.69572209713734 32.61713305457275 21.41149351345556 30 22.618741288731638 27.796987241342343 30.491047496515495 19.093223973410527 31 22.320145813230408 26.881902004931916 27.551731532111074 23.246220649726602 32 25.53366570172617 28.06180979950681 27.54261820521068 18.86190629355634 33 24.249222686823202 24.670311997426825 27.47266001929881 23.60780529645116 34 21.95909724455881 25.029484292913047 29.92307279939959 23.08834566312855 35 23.545352203280796 25.964404417283156 27.8594403345127 22.630803044923343 36 20.75721024981237 28.384528787391446 30.890961724027015 19.967299238769165 37 24.242789750187626 25.64034523426611 29.77565133483435 20.34121368071191 38 23.12962367320682 28.025088452878737 26.38495764983382 22.46033022408063 39 24.733301168650154 24.426396483327974 28.09075801436689 22.74954433365498 40 23.31832314785033 25.50498552589257 29.60946713841535 21.56722418784175 41 19.18355312533505 26.403720381687574 30.08094778599764 24.331778706979737 42 20.536614131017476 27.137075158143027 31.306690254101 21.0196204567385 43 22.38929988206283 25.020639005039136 30.353543475930095 22.236517636967942 44 23.030717272434867 23.908277045137773 29.56390050391337 23.49710517851399 45 20.91883778278117 23.623083520960652 28.881473142489543 26.57660555376863 46 24.730620778385333 26.514420499624748 27.85488367106251 20.900075050927416 47 20.56288195561274 24.16934705693149 34.38351023909082 20.884260748364962 48 21.48413208963225 25.506057681998502 28.72145384367964 24.28835638468961 49 20.576015867910368 23.634609199099387 33.174386190629356 22.614988742360886 50 22.086147743111397 22.77313176798542 30.69529323469497 24.445427254208212 51 21.232979521818375 22.369733033129624 29.139862764018442 27.25742468103356 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 58.0 1 216.5 2 375.0 3 2830.0 4 5285.0 5 3623.0 6 1961.0 7 1908.5 8 1856.0 9 1792.5 10 1729.0 11 1697.0 12 1665.0 13 1589.5 14 1514.0 15 1470.0 16 1426.0 17 1402.5 18 1379.0 19 1306.0 20 1233.0 21 1375.5 22 1518.0 23 1456.5 24 1395.0 25 1936.0 26 2947.0 27 3417.0 28 4127.5 29 4838.0 30 5441.0 31 6044.0 32 7084.0 33 8124.0 34 9394.5 35 10665.0 36 11237.0 37 11809.0 38 12895.5 39 13982.0 40 15335.0 41 16688.0 42 17730.0 43 18772.0 44 20731.5 45 22691.0 46 38035.0 47 53379.0 48 43957.5 49 34536.0 50 33693.5 51 32851.0 52 29025.5 53 25200.0 54 22711.0 55 20222.0 56 18191.0 57 16160.0 58 15039.0 59 13918.0 60 12897.5 61 11877.0 62 10241.0 63 8605.0 64 7205.0 65 5805.0 66 4609.0 67 3413.0 68 2755.5 69 2098.0 70 1739.0 71 1380.0 72 1257.0 73 1134.0 74 880.5 75 503.5 76 380.0 77 336.0 78 292.0 79 238.0 80 184.0 81 128.0 82 72.0 83 47.0 84 22.0 85 16.5 86 11.0 87 8.5 88 6.0 89 4.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 1.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 373080.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.99818158175945 #Duplication Level Percentage of deduplicated Percentage of total 1 75.0932084890665 28.534053717244685 2 9.04063574264056 6.870554371268013 3 3.3060123038194904 3.768673674961915 4 1.961867286724928 2.9818955760115005 5 1.460473783128397 2.7747674003355995 6 1.1341720242780038 2.5857884714080357 7 0.9744157238815961 2.5918217928522123 8 0.8259166020396138 2.5106663212552793 9 0.7061541233608727 2.4149315343757136 >10 5.432056036004338 33.38195609354505 >50 0.04103366666556571 1.054076154320217 >100 0.015564494252455957 1.2586545663165665 >500 0.002122431034425812 0.533086716148174 >1k 0.004244862068851624 3.0227065236359403 >5k 0.002122431034425812 5.716367086321117 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCG 7274 1.9497158786319289 No Hit GAATCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTC 7028 1.883778278117294 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGC 6962 1.866087702369465 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3022 0.8100139380293772 No Hit GCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC 2190 0.5870054679961403 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGAGGCATT 1983 0.5315213895143133 No Hit GAACTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCT 1606 0.43047067653050286 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCT 1377 0.36908973946606627 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGAGGCATTCGTA 1066 0.2857296022300847 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTC 957 0.2565133483435188 No Hit CCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGC 525 0.14072048890318428 No Hit CTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTTCTGCT 501 0.13428755226761016 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTGAGGCAT 462 0.12383403023480219 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGAGGCATTCGTATGCCGTCTT 412 0.1104320789106894 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1388442157178085 0.0 2 0.0 0.0 0.0 0.9922804760373111 0.0 3 0.0 0.0 0.0 1.2190414924412996 0.0 4 0.0 0.0 0.0 1.8853865122761875 0.0 5 0.0 0.0 0.0 4.489117615524821 0.0 6 0.0 0.0 0.0 5.102122869089739 0.0 7 0.0 0.0 0.0 5.887209177656267 0.0 8 0.0 0.0 0.0 6.795861477431114 0.0 9 0.0 0.0 0.0 7.092848718773453 0.0 10 0.0 0.0 0.0 9.755012329795218 0.0 11 0.0 0.0 0.0 10.79125120617562 0.0 12 0.0 0.0 0.0 13.549640827704513 0.0 13 0.0 0.0 0.0 14.013348343518816 0.0 14 0.0 0.0 0.0 14.256459740538222 0.0 15 0.0 0.0 0.0 14.814785032700762 0.0 16 0.0 0.0 0.0 15.39696579822022 0.0 17 0.0 0.0 0.0 16.080197276723492 0.0 18 0.0 0.0 0.0 16.74198563310818 0.0 19 0.0 0.0 0.0 17.762946284979094 0.0 20 0.0 0.0 0.0 18.322611772274044 0.0 21 0.0 0.0 0.0 18.844751795861477 0.0 22 0.0 0.0 0.0 19.499303098531147 0.0 23 0.0 0.0 0.0 20.107483649619386 0.0 24 0.0 0.0 0.0 20.588881741181517 0.0 25 0.0 0.0 0.0 21.007826739573282 0.0 26 0.0 0.0 0.0 21.400235874343306 0.0 27 2.680390264822558E-4 0.0 0.0 21.843572424144956 0.0 28 2.680390264822558E-4 0.0 0.0 22.256352524927628 0.0 29 2.680390264822558E-4 0.0 0.0 22.720328079768414 0.0 30 2.680390264822558E-4 0.0 0.0 23.212179693363353 0.0 31 2.680390264822558E-4 0.0 0.0 23.68928916050177 0.0 32 2.680390264822558E-4 0.0 0.0 24.137986490833065 0.0 33 2.680390264822558E-4 0.0 0.0 24.60678674815053 0.0 34 2.680390264822558E-4 0.0 0.0 25.053071727243488 0.0 35 2.680390264822558E-4 0.0 0.0 25.522408062613916 0.0 36 2.680390264822558E-4 0.0 0.0 26.02310496408277 0.0 37 2.680390264822558E-4 0.0 0.0 26.502626782459526 0.0 38 2.680390264822558E-4 0.0 0.0 27.003591722954862 0.0 39 2.680390264822558E-4 0.0 0.0 27.499195882920553 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATCAC 30 2.1615451E-6 45.000004 34 CGAAATA 20 7.027155E-4 45.0 12 CGACGGT 20 7.027155E-4 45.0 28 CCGATCG 20 7.027155E-4 45.0 40 CCCCGAC 25 3.885723E-5 45.0 38 TGCGAAG 25 3.885723E-5 45.0 1 CGGGCTA 20 7.027155E-4 45.0 6 CGTACTA 20 7.027155E-4 45.0 29 TACTCGC 20 7.027155E-4 45.0 45 ATGCGCG 25 3.885723E-5 45.0 1 GTAAGCG 25 3.885723E-5 45.0 1 CGATCGA 20 7.027155E-4 45.0 41 TTACACG 25 3.885723E-5 45.0 34 TCGAATA 20 7.027155E-4 45.0 44 ACGACTA 20 7.027155E-4 45.0 12 TACGTAG 20 7.027155E-4 45.0 1 CGTTTTT 1790 0.0 42.486034 1 ACGGCTG 760 0.0 42.039474 8 TACGGCT 760 0.0 41.74342 7 CCGATGA 520 0.0 41.53846 18 >>END_MODULE