##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551865_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 329060 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.6837871512794 30.0 25.0 31.0 16.0 33.0 2 27.74187990032213 30.0 25.0 33.0 16.0 34.0 3 27.69174314714642 30.0 25.0 33.0 16.0 34.0 4 31.80533945177171 35.0 28.0 35.0 19.0 37.0 5 33.34723758585061 35.0 32.0 35.0 28.0 37.0 6 33.184233878320065 35.0 32.0 35.0 28.0 37.0 7 33.845386859539296 35.0 33.0 36.0 30.0 37.0 8 33.60517838692032 35.0 33.0 37.0 28.0 37.0 9 35.7781103750076 39.0 35.0 39.0 28.0 39.0 10 35.29227800401143 37.0 34.0 39.0 31.0 39.0 11 36.051701817297754 37.0 35.0 39.0 32.0 39.0 12 36.10824165805628 37.0 35.0 39.0 32.0 39.0 13 36.118683522761806 37.0 35.0 39.0 32.0 39.0 14 37.10435482890658 39.0 36.0 40.0 32.0 41.0 15 37.18812374642922 39.0 36.0 40.0 32.0 41.0 16 36.817243055977634 38.0 35.0 40.0 32.0 41.0 17 36.80192670029782 38.0 35.0 40.0 32.0 41.0 18 36.72038837901902 38.0 35.0 40.0 32.0 41.0 19 36.359676046921535 38.0 34.0 40.0 30.0 41.0 20 36.44889381875646 38.0 35.0 40.0 31.0 41.0 21 36.8740017018173 38.0 35.0 40.0 32.0 41.0 22 37.21551996596365 39.0 35.0 40.0 32.0 41.0 23 37.501261168176015 39.0 36.0 40.0 33.0 41.0 24 37.49134808241658 39.0 35.0 41.0 33.0 41.0 25 36.73544946210418 38.0 35.0 40.0 31.0 41.0 26 36.93425211207683 39.0 35.0 40.0 32.0 41.0 27 37.172980611438646 39.0 35.0 40.0 32.0 41.0 28 37.082416580562814 39.0 35.0 40.0 31.0 41.0 29 37.21634048501793 39.0 35.0 41.0 32.0 41.0 30 36.85734820397496 39.0 35.0 40.0 31.0 41.0 31 37.04585485929618 39.0 35.0 40.0 31.0 41.0 32 36.95147389533824 39.0 35.0 40.0 31.0 41.0 33 36.880271075183856 39.0 35.0 41.0 31.0 41.0 34 36.877113596304625 40.0 35.0 41.0 31.0 41.0 35 36.796711845863975 40.0 35.0 41.0 31.0 41.0 36 36.5793958548593 40.0 35.0 41.0 30.0 41.0 37 36.805445815352826 40.0 35.0 41.0 31.0 41.0 38 36.652218440406 39.0 35.0 41.0 31.0 41.0 39 36.53392694341458 39.0 35.0 41.0 31.0 41.0 40 36.47891266030511 39.0 35.0 41.0 30.0 41.0 41 36.1545523612715 39.0 35.0 40.0 29.0 41.0 42 36.44099556311919 39.0 35.0 41.0 30.0 41.0 43 36.39619826171519 39.0 35.0 41.0 30.0 41.0 44 36.58812678538868 39.0 35.0 41.0 31.0 41.0 45 36.573554974776634 39.0 35.0 41.0 31.0 41.0 46 36.44189205615997 39.0 35.0 40.0 31.0 41.0 47 36.243545250106365 39.0 35.0 41.0 30.0 41.0 48 36.39876922141858 39.0 35.0 40.0 31.0 41.0 49 36.418346198261716 39.0 35.0 41.0 31.0 41.0 50 36.215185680423026 39.0 35.0 40.0 30.0 41.0 51 35.39317145809275 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 7.0 11 12.0 12 6.0 13 9.0 14 15.0 15 23.0 16 44.0 17 70.0 18 147.0 19 241.0 20 592.0 21 962.0 22 1395.0 23 1808.0 24 2424.0 25 3117.0 26 3596.0 27 3960.0 28 4231.0 29 4829.0 30 6080.0 31 8407.0 32 11676.0 33 17284.0 34 23532.0 35 27727.0 36 40769.0 37 64401.0 38 78297.0 39 23395.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.41597277092324 16.023521546222575 19.709779371543185 16.850726311311007 2 29.379140582264636 32.61198565611135 20.48076338661642 17.528110375007596 3 27.065884641098886 30.240077797362186 26.292469458457425 16.401568103081505 4 25.772503494803377 20.765513888044733 36.03658907190178 17.425393545250106 5 31.17243055977633 24.42077432687048 24.706132620190846 19.70066249316234 6 21.562936850422414 38.307603476569625 26.03689296784781 14.092566705160154 7 65.16197653923297 6.29155777061934 22.494377924998478 6.0520877651492135 8 62.77517777912842 14.94621041755303 14.705524828298792 7.573086975019754 9 57.85571020482587 8.449826779310763 15.198747948702366 18.495715067161004 10 34.7392572783079 27.51443505743633 22.605907737190787 15.140399927064973 11 30.444599769039083 22.735671306144773 28.012824408922388 18.80690451589376 12 25.95392937458214 19.18799003221297 31.567495289612836 23.290585303592053 13 23.914483680787697 21.98504831945542 36.6352640855771 17.465203914179785 14 18.743998055065944 29.22597702546648 29.7684312891266 22.26159363034097 15 15.967604692153406 24.270953625478636 39.26153285115176 20.49990883121619 16 18.389047590105147 25.35950890415122 29.990883121619156 26.260560384124474 17 18.037136084604633 26.802102959946517 33.07755424542636 22.083206710022488 18 18.028626998115847 25.632407463684437 32.6569622561235 23.682003282076217 19 18.930894061873214 26.77870297210235 29.958366255394154 24.33203671063028 20 21.200388986810918 26.563848538260498 35.41846471768066 16.817297757247918 21 20.251018051419194 30.013371421625234 30.90956056646204 18.826049960493528 22 17.614416823679573 23.926031726736767 33.02315687108734 25.436394578496323 23 19.353309426852245 27.930164711602746 32.02668206406127 20.689843797483743 24 21.297331793593873 25.129459673007965 29.14210174436273 24.431106789035432 25 17.482222087157357 32.15614173706923 28.400899532000246 21.96073664377317 26 18.649182519905185 25.480763386616424 32.09961709110801 23.770437002370386 27 22.454871452014828 26.403087582811647 28.10034644137847 23.04169452379505 28 16.355072023339208 25.762171032638427 35.14799732571567 22.73475961830669 29 24.364553576855286 21.730383516683887 30.691059381267856 23.214003525192975 30 18.07694645353431 27.049778155959398 30.4512854798517 24.42198991065459 31 21.24749285844527 23.01160882513827 31.469640794991793 24.271257521424662 32 24.07402905245244 25.896796936728865 29.595818391782654 20.433355619036043 33 18.91873822403209 22.19990275329727 29.246034157904333 29.635324864766304 34 23.91721874430195 22.26037804655686 32.532364918251986 21.2900382908892 35 22.279219595210602 21.506716100407218 28.440102109037866 27.773962195344314 36 21.746793897769404 23.06053607244879 33.70661885370449 21.48605117607731 37 19.015984926761075 22.20841183978606 36.58056281529205 22.195040418160822 38 18.90779796997508 24.07889138758889 29.89910654591868 27.11420409651735 39 20.87522032456087 21.898741870783446 36.74618610587735 20.47985169877834 40 22.909803683218865 21.457484957150672 30.9913085759436 24.641402783686868 41 19.047894001094026 24.049717376770193 33.536741019874796 23.365647602260985 42 21.83461982617152 21.7218744301951 34.394943171458095 22.048562572175285 43 23.2510788306084 21.29945906521607 30.990396888105515 24.459065216070016 44 21.042363094876315 21.459004436880814 31.71579651127454 25.782835956968338 45 19.90640004862335 19.892116939160033 31.408557709840153 28.792925302376464 46 25.059867501367535 24.29739257278308 29.838935148605117 20.803804777244274 47 17.60651552908284 22.045523612715005 38.152920440041335 22.195040418160822 48 20.527259466358718 22.891266030511154 30.777669725885858 25.80380477724427 49 19.904272777001157 19.296176988998965 37.57855710204826 23.22099313195162 50 20.686500942077434 19.312891266030512 33.552847505014284 26.447760286877774 51 20.03646751352337 20.05348568650094 29.97751169999392 29.932535099981767 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 151.0 1 317.0 2 483.0 3 2584.0 4 4685.0 5 3106.0 6 1527.0 7 1464.5 8 1402.0 9 1389.0 10 1376.0 11 1299.5 12 1223.0 13 1178.0 14 1133.0 15 1083.0 16 1033.0 17 1007.0 18 981.0 19 951.0 20 921.0 21 994.5 22 1068.0 23 1313.0 24 1558.0 25 1842.0 26 2550.0 27 2974.0 28 3617.5 29 4261.0 30 4951.5 31 5642.0 32 6332.5 33 7023.0 34 7853.0 35 8683.0 36 9170.0 37 9657.0 38 10360.5 39 11064.0 40 12167.5 41 13271.0 42 14987.5 43 16704.0 44 18050.5 45 19397.0 46 39096.0 47 58795.0 48 45746.5 49 32698.0 50 31833.0 51 30968.0 52 25864.0 53 20760.0 54 18230.5 55 15701.0 56 14106.5 57 12512.0 58 11643.0 59 10774.0 60 9808.5 61 8843.0 62 7867.5 63 6892.0 64 5461.5 65 4031.0 66 3584.5 67 3138.0 68 2570.5 69 2003.0 70 1583.5 71 1164.0 72 1060.0 73 956.0 74 798.0 75 528.5 76 417.0 77 321.5 78 226.0 79 158.5 80 91.0 81 71.5 82 52.0 83 41.0 84 30.0 85 21.0 86 12.0 87 8.0 88 4.0 89 5.0 90 6.0 91 4.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 329060.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.68506917220062 #Duplication Level Percentage of deduplicated Percentage of total 1 71.48489927070885 22.65003978160204 2 11.770798364725565 7.45917120796711 3 4.2517945574814835 4.041552139793607 4 2.1413614246703316 2.713967394534461 5 1.340594640295021 2.123841695481458 6 0.9086427723322417 1.7274245456500332 7 0.7560327737653747 1.676846551324462 8 0.6213824379564034 1.575083642323144 9 0.5535589036688316 1.5785596938271025 >10 6.030300974623453 36.701274859796804 >50 0.08976630623772232 1.8576123374343427 >100 0.03889873270301301 2.488404141707726 >500 0.0019948068052827186 0.44275516923196906 >1k 0.006981823818489515 4.824166779675951 >5k 0.0029922102079240776 8.139300059649795 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCG 8933 2.7147024858688384 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTC 8802 2.67489211693916 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGC 8020 2.437245487145202 No Hit GCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 3141 0.9545371664741993 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2899 0.8809943475354038 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTTCTGTT 2280 0.6928827569440223 No Hit GAACTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCT 2012 0.611438643408497 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCT 1948 0.5919893028626998 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTA 1523 0.46283352580076587 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTC 1462 0.4442958730930529 No Hit CCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 781 0.23734273384793045 No Hit CTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGCT 620 0.18841548653740958 Illumina Single End Adapter 1 (95% over 21bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATG 484 0.1470856378775907 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCGCTTCTGT 478 0.14526226220142222 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCC 432 0.13128304868413057 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGT 412 0.12520512976356896 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTT 390 0.1185194189509512 No Hit TCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 374 0.1136570838145019 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 344 0.10454020543365951 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTAT 340 0.1033246216495472 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.19327782167385887 0.0 2 0.0 0.0 0.0 1.6279705828724245 0.0 3 0.0 0.0 0.0 1.941287303227375 0.0 4 0.0 0.0 0.0 3.0061386981097673 0.0 5 0.0 0.0 0.0 6.810308150489273 0.0 6 0.0 0.0 0.0 7.599222026378168 0.0 7 0.0 0.0 0.0 8.84002917401082 0.0 8 0.0 0.0 0.0 10.209688202759375 0.0 9 0.0 0.0 0.0 10.609311371786301 0.0 10 0.0 0.0 0.0 14.304382179541724 0.0 11 0.0 0.0 0.0 15.642739925849389 0.0 12 0.0 0.0 0.0 19.21959521059989 0.0 13 0.0 0.0 0.0 19.883911748617273 0.0 14 0.0 0.0 0.0 20.187503798699325 0.0 15 0.0 0.0 0.0 21.052391661095243 0.0 16 0.0 0.0 0.0 21.837050993739744 0.0 17 0.0 0.0 0.0 22.677627180453413 0.0 18 0.0 0.0 0.0 23.485990396888106 0.0 19 0.0 0.0 0.0 24.79122348507871 0.0 20 0.0 0.0 0.0 25.53485686500942 0.0 21 0.0 0.0 0.0 26.231994165197836 0.0 22 0.0 0.0 0.0 27.076824895155898 0.0 23 0.0 0.0 0.0 27.756640126420713 0.0 24 0.0 0.0 0.0 28.36352033063879 0.0 25 0.0 0.0 0.0 28.884701878076946 0.0 26 0.0 0.0 0.0 29.390992524159728 0.0 27 0.0 0.0 0.0 29.93678964322616 0.0 28 0.0 0.0 0.0 30.454020543365953 0.0 29 0.0 0.0 0.0 30.97793715431836 0.0 30 0.0 0.0 0.0 31.499726493648573 0.0 31 0.0 0.0 0.0 32.05312101136571 0.0 32 0.0 0.0 0.0 32.553333738527925 0.0 33 0.0 0.0 0.0 33.0584088008266 0.0 34 0.0 0.0 0.0 33.573208533398166 0.0 35 0.0 0.0 0.0 34.1244757794931 0.0 36 0.0 0.0 0.0 34.65203914179785 0.0 37 0.0 0.0 0.0 35.13371421625236 0.0 38 0.0 0.0 0.0 35.650945116392144 0.0 39 0.0 0.0 0.0 36.16483316112563 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATCG 35 1.208391E-7 45.000004 40 CGATCGA 35 1.208391E-7 45.000004 41 CTTCGAC 20 7.02594E-4 45.0 22 CTACTCA 20 7.02594E-4 45.0 29 TTGGACG 45 3.8380676E-10 45.0 1 ACGTTAA 25 3.8847178E-5 45.0 15 TCCGAGG 20 7.02594E-4 45.0 2 GTTTACG 20 7.02594E-4 45.0 1 TAGCGGT 20 7.02594E-4 45.0 2 CGCGCGG 20 7.02594E-4 45.0 2 CGCGATT 20 7.02594E-4 45.0 43 AGGAACG 20 7.02594E-4 45.0 2 TATGATG 20 7.02594E-4 45.0 16 ATCAACC 25 3.8847178E-5 45.0 10 CGTTAAT 25 3.8847178E-5 45.0 16 TCTACTC 20 7.02594E-4 45.0 28 CGCTATT 25 3.8847178E-5 45.0 12 CGAATGC 40 6.7902874E-9 45.0 45 CGGGACG 25 3.8847178E-5 45.0 6 GCGATAT 25 3.8847178E-5 45.0 9 >>END_MODULE